RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 RILPL2Q969X0 211 aa20.89■□□□□ 0.93
SHKBP1-216ENST00000598201 RBM42Q9BTD8 480 aaKnown RBP20.89■□□□□ 0.93
SHKBP1-216ENST00000598201 EIF5BO60841 1220 aaKnown RBP20.88■□□□□ 0.93
SHKBP1-216ENST00000598201 SASH1O94885 1247 aa20.88■□□□□ 0.93
SHKBP1-216ENST00000598201 SLC4A9Q96Q91 983 aa20.88■□□□□ 0.93
SHKBP1-216ENST00000598201 SLKQ9H2G2 1235 aaPredicted RBP20.88■□□□□ 0.93
SHKBP1-216ENST00000598201 NHSQ6T4R5 1651 aa20.87■□□□□ 0.93
SHKBP1-216ENST00000598201 ERC1Q8IUD2 1116 aa20.87■□□□□ 0.93
SHKBP1-216ENST00000598201 ERC2O15083 957 aa20.87■□□□□ 0.93
SHKBP1-216ENST00000598201 CLASRPQ8N2M8 674 aaKnown RBP20.87■□□□□ 0.93
SHKBP1-216ENST00000598201 SIL1Q9H173 461 aa20.87■□□□□ 0.93
SHKBP1-216ENST00000598201 USP42Q9H9J4 1324 aaKnown RBP20.87■□□□□ 0.93
SHKBP1-216ENST00000598201 COL15A1P39059 1388 aa20.87■□□□□ 0.93
SHKBP1-216ENST00000598201 MAP4K4O95819 1239 aaPredicted RBP20.86■□□□□ 0.93
SHKBP1-216ENST00000598201 CHMLP26374 656 aa20.86■□□□□ 0.93
SHKBP1-216ENST00000598201 RABL6Q3YEC7 729 aaPredicted RBP20.86■□□□□ 0.93
SHKBP1-216ENST00000598201 TEX13AQ9BXU3 409 aaPredicted RBP20.86■□□□□ 0.93
SHKBP1-216ENST00000598201 ANTXR1Q9H6X2 564 aa20.86■□□□□ 0.93
SHKBP1-216ENST00000598201 H7C1W4 665 aa20.85■□□□□ 0.93
SHKBP1-216ENST00000598201 RFX5P48382 616 aaPredicted RBP20.85■□□□□ 0.93
SHKBP1-216ENST00000598201 G3BP1Q13283 466 aaKnown RBP eCLIP20.85■□□□□ 0.93
SHKBP1-216ENST00000598201 SPRYD3Q8NCJ5 442 aa20.85■□□□□ 0.93
SHKBP1-216ENST00000598201 SNX21Q969T3 373 aa20.85■□□□□ 0.93
SHKBP1-216ENST00000598201 ZNF330Q9Y3S2 320 aaPredicted RBP20.85■□□□□ 0.93
SHKBP1-216ENST00000598201 ESYT1Q9BSJ8 1104 aa20.85■□□□□ 0.93
SHKBP1-216ENST00000598201 CD2BP2O95400 341 aaKnown RBP20.84■□□□□ 0.93
SHKBP1-216ENST00000598201 HSCBQ8IWL3 235 aa20.84■□□□□ 0.93
SHKBP1-216ENST00000598201 CWC25Q9NXE8 425 aaPredicted RBP20.84■□□□□ 0.93
SHKBP1-216ENST00000598201 REC8O95072 547 aa20.84■□□□□ 0.93
SHKBP1-216ENST00000598201 APBA3O96018 575 aa20.84■□□□□ 0.93
SHKBP1-216ENST00000598201 RTL5Q5HYW3 569 aaPredicted RBP20.84■□□□□ 0.93
SHKBP1-216ENST00000598201 CCDC125Q86Z20 511 aa20.84■□□□□ 0.93
SHKBP1-216ENST00000598201 TTC41PQ6P2S7 1318 aa20.83■□□□□ 0.93
SHKBP1-216ENST00000598201 STARD3NLO95772 234 aa20.83■□□□□ 0.93
SHKBP1-216ENST00000598201 SF3B2Q13435 895 aaKnown RBP20.83■□□□□ 0.93
SHKBP1-216ENST00000598201 AACSQ86V21 672 aa20.83■□□□□ 0.93
SHKBP1-216ENST00000598201 EAF2Q96CJ1 260 aaPredicted RBP20.83■□□□□ 0.93
SHKBP1-216ENST00000598201 FOXO4P98177 505 aa20.82■□□□□ 0.92
SHKBP1-216ENST00000598201 PTPN12Q05209 780 aaKnown RBP20.82■□□□□ 0.92
SHKBP1-216ENST00000598201 COPRSQ9NQ92 184 aa20.82■□□□□ 0.92
SHKBP1-216ENST00000598201 TJP1Q07157 1748 aa20.82■□□□□ 0.92
SHKBP1-216ENST00000598201 IFIT2P09913 472 aaKnown RBP20.82■□□□□ 0.92
SHKBP1-216ENST00000598201 CCDC191Q8NCU4 936 aa20.82■□□□□ 0.92
SHKBP1-216ENST00000598201 UPF1Q92900 1129 aaKnown RBP eCLIP20.82■□□□□ 0.92
SHKBP1-216ENST00000598201 BTAF1O14981 1849 aa20.82■□□□□ 0.92
SHKBP1-216ENST00000598201 CYP19A1P11511 503 aaPredicted RBP20.81■□□□□ 0.92
SHKBP1-216ENST00000598201 NFKBIBQ15653 356 aa20.81■□□□□ 0.92
SHKBP1-216ENST00000598201 LMBR1LQ6UX01 489 aa20.81■□□□□ 0.92
SHKBP1-216ENST00000598201 ECHDC1Q9NTX5 307 aa20.81■□□□□ 0.92
SHKBP1-216ENST00000598201 ISCA1Q9BUE6 129 aa20.81■□□□□ 0.92
SHKBP1-216ENST00000598201 IL25Q9H293 177 aa20.81■□□□□ 0.92
SHKBP1-216ENST00000598201 GLRX3O76003 335 aaKnown RBP20.8■□□□□ 0.92
SHKBP1-216ENST00000598201 CCDC8Q9H0W5 538 aaPredicted RBP20.8■□□□□ 0.92
SHKBP1-216ENST00000598201 TLR7Q9NYK1 1049 aaKnown RBP20.8■□□□□ 0.92
SHKBP1-216ENST00000598201 TCIRG1Q13488 830 aa20.79■□□□□ 0.92
SHKBP1-216ENST00000598201 SMARCC1Q92922 1105 aaPredicted RBP20.79■□□□□ 0.92
SHKBP1-216ENST00000598201 TNS1Q9HBL0 1735 aaKnown RBP20.79■□□□□ 0.92
SHKBP1-216ENST00000598201 PLSCR1O15162 318 aa20.78■□□□□ 0.92
SHKBP1-216ENST00000598201 KIF6Q6ZMV9 814 aa20.78■□□□□ 0.92
SHKBP1-216ENST00000598201 CNTROBQ8N137 903 aa20.78■□□□□ 0.92
SHKBP1-216ENST00000598201 ZBTB1Q9Y2K1 713 aa20.78■□□□□ 0.92
SHKBP1-216ENST00000598201 RABEP1Q15276 862 aa20.77■□□□□ 0.92
SHKBP1-216ENST00000598201 PALLDQ8WX93 1383 aa20.77■□□□□ 0.92
SHKBP1-216ENST00000598201 BAG6P46379 1132 aa20.77■□□□□ 0.92
SHKBP1-216ENST00000598201 GPATCH3Q96I76 525 aa20.77■□□□□ 0.92
SHKBP1-216ENST00000598201 ARXQ96QS3 562 aa20.77■□□□□ 0.92
SHKBP1-216ENST00000598201 CHMP3Q9Y3E7 222 aa20.76■□□□□ 0.91
SHKBP1-216ENST00000598201 AK9Q5TCS8 1911 aa20.76■□□□□ 0.91
SHKBP1-216ENST00000598201 MAP3K15Q6ZN16 1313 aa20.76■□□□□ 0.91
SHKBP1-216ENST00000598201 EN1Q05925 392 aaPredicted RBP20.76■□□□□ 0.91
SHKBP1-216ENST00000598201 TFCP2Q12800 502 aa20.76■□□□□ 0.91
SHKBP1-216ENST00000598201 HLFQ16534 295 aa20.76■□□□□ 0.91
SHKBP1-216ENST00000598201 ANO2Q9NQ90 1003 aa20.76■□□□□ 0.91
SHKBP1-216ENST00000598201 TRIM28Q13263 835 aaKnown RBP20.75■□□□□ 0.91
SHKBP1-216ENST00000598201 DEFB132Q7Z7B7 95 aa20.75■□□□□ 0.91
SHKBP1-216ENST00000598201 K7ELQ4 463 aaPredicted RBP20.74■□□□□ 0.91
SHKBP1-216ENST00000598201 FRAT2O75474 233 aaPredicted RBP20.74■□□□□ 0.91
SHKBP1-216ENST00000598201 GIGYF2Q6Y7W6 1299 aaKnown RBP20.74■□□□□ 0.91
SHKBP1-216ENST00000598201 LOC102724428A0A0B4J2F2 783 aa20.73■□□□□ 0.91
SHKBP1-216ENST00000598201 SIK1P57059 783 aa20.73■□□□□ 0.91
SHKBP1-216ENST00000598201 SGSM2O43147 1006 aa20.73■□□□□ 0.91
SHKBP1-216ENST00000598201 TNNI3KQ59H18 835 aa20.73■□□□□ 0.91
SHKBP1-216ENST00000598201 PROM2Q8N271 834 aa20.73■□□□□ 0.91
SHKBP1-216ENST00000598201 CAMKK2Q96RR4 588 aa20.73■□□□□ 0.91
SHKBP1-216ENST00000598201 FPGT-TNNI3KV9GXZ4 949 aa20.73■□□□□ 0.91
SHKBP1-216ENST00000598201 EZH2Q15910 746 aaKnown RBP20.72■□□□□ 0.91
SHKBP1-216ENST00000598201 PALD1Q9ULE6 856 aa20.72■□□□□ 0.91
SHKBP1-216ENST00000598201 DDIT3P35638 169 aa20.71■□□□□ 0.91
SHKBP1-216ENST00000598201 TXNRD1Q16881 649 aa20.71■□□□□ 0.91
SHKBP1-216ENST00000598201 ATG9AQ7Z3C6 839 aa20.71■□□□□ 0.91
SHKBP1-216ENST00000598201 FAM89AQ96GI7 184 aa20.71■□□□□ 0.91
SHKBP1-216ENST00000598201 DBNLQ9UJU6 430 aaKnown RBP20.71■□□□□ 0.91
SHKBP1-216ENST00000598201 GPTP24298 496 aa20.71■□□□□ 0.91
SHKBP1-216ENST00000598201 ATP6V1AP38606 617 aa20.71■□□□□ 0.91
SHKBP1-216ENST00000598201 KCNQ4P56696 695 aa20.71■□□□□ 0.91
SHKBP1-216ENST00000598201 CWC27Q6UX04 472 aaKnown RBP20.71■□□□□ 0.91
SHKBP1-216ENST00000598201 ZNF594Q96JF6 807 aaPredicted RBP20.71■□□□□ 0.91
SHKBP1-216ENST00000598201 BOLA2Q9H3K6 86 aa20.71■□□□□ 0.91
SHKBP1-216ENST00000598201 CCNL1Q9UK58 526 aaPredicted RBP20.71■□□□□ 0.91
SHKBP1-216ENST00000598201 PCCAP05165 728 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms