RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 BRPF1P55201 1214 aaPredicted RBP20.93■□□□□ 0.94
LIG1-214ENST00000597146 SOX10P56693 466 aa20.93■□□□□ 0.94
LIG1-214ENST00000597146 CIAPIN1Q6FI81 312 aa20.93■□□□□ 0.94
LIG1-214ENST00000597146 NUP98P52948 1817 aa20.92■□□□□ 0.94
LIG1-214ENST00000597146 GNAT3A8MTJ3 354 aa20.92■□□□□ 0.94
LIG1-214ENST00000597146 LARGE2Q8N3Y3 721 aa20.92■□□□□ 0.94
LIG1-214ENST00000597146 KNSTRNQ9Y448 316 aa20.92■□□□□ 0.94
LIG1-214ENST00000597146 LAMB4A4D0S4 1761 aa20.91■□□□□ 0.94
LIG1-214ENST00000597146 DIAPH1O60610 1272 aaKnown RBP20.91■□□□□ 0.94
LIG1-214ENST00000597146 COL3A1P02461 1466 aaPredicted RBP20.91■□□□□ 0.94
LIG1-214ENST00000597146 CEMIPQ8WUJ3 1361 aa20.91■□□□□ 0.94
LIG1-214ENST00000597146 GLIS2Q9BZE0 524 aaPredicted RBP20.91■□□□□ 0.94
LIG1-214ENST00000597146 ZIC5Q96T25 663 aa20.9■□□□□ 0.94
LIG1-214ENST00000597146 ZNF408Q9H9D4 720 aa20.9■□□□□ 0.94
LIG1-214ENST00000597146 BTBD11A6QL63 1104 aa20.89■□□□□ 0.93
LIG1-214ENST00000597146 AMER1Q5JTC6 1135 aaPredicted RBP20.89■□□□□ 0.93
LIG1-214ENST00000597146 NBPF26B4DH59 902 aa20.88■□□□□ 0.93
LIG1-214ENST00000597146 HSPA5P11021 654 aaKnown RBP20.88■□□□□ 0.93
LIG1-214ENST00000597146 HLFQ16534 295 aa20.88■□□□□ 0.93
LIG1-214ENST00000597146 CRY2Q49AN0 593 aa20.88■□□□□ 0.93
LIG1-214ENST00000597146 NBPF10Q6P3W6 841 aaKnown RBP20.88■□□□□ 0.93
LIG1-214ENST00000597146 NUTM1Q86Y26 1132 aa20.88■□□□□ 0.93
LIG1-214ENST00000597146 NBPF15Q8N660 670 aa20.88■□□□□ 0.93
LIG1-214ENST00000597146 GAS2L2Q8NHY3 880 aa20.88■□□□□ 0.93
LIG1-214ENST00000597146 ADARB2Q9NS39 739 aaKnown RBP20.88■□□□□ 0.93
LIG1-214ENST00000597146 GPRC5DQ9NZD1 345 aa20.88■□□□□ 0.93
LIG1-214ENST00000597146 GTF2E1P29083 439 aaPredicted RBP20.87■□□□□ 0.93
LIG1-214ENST00000597146 HHIPL1Q96JK4 782 aa20.87■□□□□ 0.93
LIG1-214ENST00000597146 RIC1Q4ADV7 1423 aa20.87■□□□□ 0.93
LIG1-214ENST00000597146 CC2D2BQ6DHV5 1058 aa20.86■□□□□ 0.93
LIG1-214ENST00000597146 NIM1KQ8IY84 436 aa20.86■□□□□ 0.93
LIG1-214ENST00000597146 AKAP11Q9UKA4 1901 aa20.86■□□□□ 0.93
LIG1-214ENST00000597146 TCERG1O14776 1098 aaKnown RBP20.85■□□□□ 0.93
LIG1-214ENST00000597146 NPC1L1Q9UHC9 1359 aa20.85■□□□□ 0.93
LIG1-214ENST00000597146 PPIP5K2O43314 1243 aa20.84■□□□□ 0.93
LIG1-214ENST00000597146 AOC3Q16853 763 aa20.84■□□□□ 0.93
LIG1-214ENST00000597146 PRPF38BQ5VTL8 546 aaKnown RBP20.84■□□□□ 0.93
LIG1-214ENST00000597146 U2SURPO15042 1029 aaKnown RBP20.83■□□□□ 0.93
LIG1-214ENST00000597146 RGL2O15211 777 aa20.83■□□□□ 0.93
LIG1-214ENST00000597146 GMPSP49915 693 aaPredicted RBP20.83■□□□□ 0.93
LIG1-214ENST00000597146 RPGRQ92834 1020 aaKnown RBP20.83■□□□□ 0.93
LIG1-214ENST00000597146 PPEF1O14829 653 aaPredicted RBP20.82■□□□□ 0.92
LIG1-214ENST00000597146 SNRPA1P09661 255 aaKnown RBP20.82■□□□□ 0.92
LIG1-214ENST00000597146 EIF4G2P78344 907 aaKnown RBP eCLIP20.82■□□□□ 0.92
LIG1-214ENST00000597146 NOGQ13253 232 aa20.82■□□□□ 0.92
LIG1-214ENST00000597146 POLR2AP24928 1970 aaKnown RBP20.81■□□□□ 0.92
LIG1-214ENST00000597146 CXCL9Q07325 125 aa20.81■□□□□ 0.92
LIG1-214ENST00000597146 LAMB2P55268 1798 aa20.8■□□□□ 0.92
LIG1-214ENST00000597146 HOXA10P31260 410 aaPredicted RBP20.8■□□□□ 0.92
LIG1-214ENST00000597146 HIRAP54198 1017 aaPredicted RBP20.8■□□□□ 0.92
LIG1-214ENST00000597146 DLK2Q6UY11 383 aa20.8■□□□□ 0.92
LIG1-214ENST00000597146 TRPM4Q8TD43 1214 aa20.8■□□□□ 0.92
LIG1-214ENST00000597146 PGAP2Q9UHJ9 254 aa20.8■□□□□ 0.92
LIG1-214ENST00000597146 SHTN1A0MZ66 631 aa20.79■□□□□ 0.92
LIG1-214ENST00000597146 HUNKP57058 714 aa20.79■□□□□ 0.92
LIG1-214ENST00000597146 C3orf67Q6ZVT6 689 aa20.79■□□□□ 0.92
LIG1-214ENST00000597146 NYXQ9GZU5 481 aa20.79■□□□□ 0.92
LIG1-214ENST00000597146 KIF7Q2M1P5 1343 aa20.78■□□□□ 0.92
LIG1-214ENST00000597146 GRIPAP1Q4V328 841 aa20.78■□□□□ 0.92
LIG1-214ENST00000597146 CC2D1BQ5T0F9 858 aaKnown RBP20.78■□□□□ 0.92
LIG1-214ENST00000597146 PHACTR3Q96KR7 559 aa20.78■□□□□ 0.92
LIG1-214ENST00000597146 UBN2Q6ZU65 1347 aa20.78■□□□□ 0.92
LIG1-214ENST00000597146 NGEFQ8N5V2 710 aa20.77■□□□□ 0.92
LIG1-214ENST00000597146 RBM17Q96I25 401 aaKnown RBP20.77■□□□□ 0.92
LIG1-214ENST00000597146 ZNRF3Q9ULT6 936 aa20.77■□□□□ 0.92
LIG1-214ENST00000597146 IBTKQ9P2D0 1353 aaPredicted RBP20.76■□□□□ 0.91
LIG1-214ENST00000597146 FAM155AB1AL88 458 aaPredicted RBP20.76■□□□□ 0.91
LIG1-214ENST00000597146 GPTP24298 496 aa20.76■□□□□ 0.91
LIG1-214ENST00000597146 CDC37L1Q7L3B6 337 aa20.76■□□□□ 0.91
LIG1-214ENST00000597146 MCM10Q7L590 875 aa20.76■□□□□ 0.91
LIG1-214ENST00000597146 CRAMP1Q96RY5 1269 aa20.76■□□□□ 0.91
LIG1-214ENST00000597146 USP48Q86UV5 1035 aa20.75■□□□□ 0.91
LIG1-214ENST00000597146 BCL2L13Q9BXK5 485 aa20.75■□□□□ 0.91
LIG1-214ENST00000597146 SAGE1Q9NXZ1 904 aa20.75■□□□□ 0.91
LIG1-214ENST00000597146 TAF1P21675 1872 aa20.75■□□□□ 0.91
LIG1-214ENST00000597146 CDHR2Q9BYE9 1310 aa20.75■□□□□ 0.91
LIG1-214ENST00000597146 RAD17O75943 681 aa20.74■□□□□ 0.91
LIG1-214ENST00000597146 PRKAR2BP31323 418 aa20.74■□□□□ 0.91
LIG1-214ENST00000597146 SUSD4Q5VX71 490 aa20.74■□□□□ 0.91
LIG1-214ENST00000597146 ZC3H15Q8WU90 426 aaKnown RBP20.74■□□□□ 0.91
LIG1-214ENST00000597146 RNF186Q9NXI6 227 aa20.74■□□□□ 0.91
LIG1-214ENST00000597146 KDM3BQ7LBC6 1761 aa20.74■□□□□ 0.91
LIG1-214ENST00000597146 TRPA1O75762 1119 aa20.73■□□□□ 0.91
LIG1-214ENST00000597146 KIF23Q02241 960 aaPredicted RBP20.73■□□□□ 0.91
LIG1-214ENST00000597146 RGMBQ6NW40 437 aa20.73■□□□□ 0.91
LIG1-214ENST00000597146 MAP3K15Q6ZN16 1313 aa20.73■□□□□ 0.91
LIG1-214ENST00000597146 DUOX1Q9NRD9 1551 aa20.72■□□□□ 0.91
LIG1-214ENST00000597146 DCTN1Q14203 1278 aa20.72■□□□□ 0.91
LIG1-214ENST00000597146 TTLL7Q6ZT98 887 aa20.72■□□□□ 0.91
LIG1-214ENST00000597146 ATP6V0A2Q9Y487 856 aa20.72■□□□□ 0.91
LIG1-214ENST00000597146 ANKRD36CQ5JPF3 1778 aa20.72■□□□□ 0.91
LIG1-214ENST00000597146 NTSR2O95665 410 aa20.71■□□□□ 0.91
LIG1-214ENST00000597146 CTU1Q7Z7A3 348 aaKnown RBP20.71■□□□□ 0.91
LIG1-214ENST00000597146 RSPH6AQ9H0K4 717 aa20.71■□□□□ 0.91
LIG1-214ENST00000597146 CNOT7Q9UIV1 285 aaKnown RBP20.71■□□□□ 0.91
LIG1-214ENST00000597146 ERVV-1B6SEH8 477 aa20.7■□□□□ 0.9
LIG1-214ENST00000597146 CNGB1Q14028 1251 aaPredicted RBP20.7■□□□□ 0.9
LIG1-214ENST00000597146 MICALL2Q8IY33 904 aa20.7■□□□□ 0.9
LIG1-214ENST00000597146 RTFDC1Q9BY42 306 aaPredicted RBP20.7■□□□□ 0.9
LIG1-214ENST00000597146 VPS33BQ9H267 617 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms