RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 JARID2Q92833 1246 aaPredicted RBP28.4■■■□□ 2.14
SPTBN4-210ENST00000596900 EPHA10Q5JZY3 1008 aa28.39■■■□□ 2.14
SPTBN4-210ENST00000596900 ZBTB38Q8NAP3 1195 aaPredicted RBP28.39■■■□□ 2.14
SPTBN4-210ENST00000596900 BCORQ6W2J9 1755 aa28.38■■■□□ 2.13
SPTBN4-210ENST00000596900 NLRP10Q86W26 655 aa28.38■■■□□ 2.13
SPTBN4-210ENST00000596900 BCL11AQ9H165 835 aa28.38■■■□□ 2.13
SPTBN4-210ENST00000596900 ZNF652Q9Y2D9 606 aa28.38■■■□□ 2.13
SPTBN4-210ENST00000596900 RHPN1Q8TCX5 695 aa28.38■■■□□ 2.13
SPTBN4-210ENST00000596900 GPTP24298 496 aa28.37■■■□□ 2.13
SPTBN4-210ENST00000596900 CAMTA2O94983 1202 aa28.36■■■□□ 2.13
SPTBN4-210ENST00000596900 HMGB2P26583 209 aaKnown RBP28.36■■■□□ 2.13
SPTBN4-210ENST00000596900 KCNQ4P56696 695 aa28.36■■■□□ 2.13
SPTBN4-210ENST00000596900 G3BP1Q13283 466 aaKnown RBP eCLIP28.36■■■□□ 2.13
SPTBN4-210ENST00000596900 RTL5Q5HYW3 569 aaPredicted RBP28.36■■■□□ 2.13
SPTBN4-210ENST00000596900 C16orf71Q8IYS4 520 aaPredicted RBP28.36■■■□□ 2.13
SPTBN4-210ENST00000596900 CDHR2Q9BYE9 1310 aa28.35■■■□□ 2.13
SPTBN4-210ENST00000596900 RGL2O15211 777 aa28.35■■■□□ 2.13
SPTBN4-210ENST00000596900 FOXO4P98177 505 aa28.35■■■□□ 2.13
SPTBN4-210ENST00000596900 ZNF34Q8IZ26 560 aa28.35■■■□□ 2.13
SPTBN4-210ENST00000596900 RPS6KA4O75676 772 aa28.34■■■□□ 2.13
SPTBN4-210ENST00000596900 LMBR1LQ6UX01 489 aa28.34■■■□□ 2.13
SPTBN4-210ENST00000596900 COPRSQ9NQ92 184 aa28.34■■■□□ 2.13
SPTBN4-210ENST00000596900 PA2G4Q9UQ80 394 aaKnown RBP28.34■■■□□ 2.13
SPTBN4-210ENST00000596900 C4BP0C0L5 1744 aa28.33■■■□□ 2.13
SPTBN4-210ENST00000596900 TRIM37O94972 964 aa28.33■■■□□ 2.13
SPTBN4-210ENST00000596900 PARP10Q53GL7 1025 aa28.33■■■□□ 2.13
SPTBN4-210ENST00000596900 CLEC4GQ6UXB4 293 aa28.33■■■□□ 2.13
SPTBN4-210ENST00000596900 PLA2G12BQ9BX93 195 aa28.33■■■□□ 2.13
SPTBN4-210ENST00000596900 OSBPL3Q9H4L5 887 aa28.33■■■□□ 2.13
SPTBN4-210ENST00000596900 RTCBQ9Y3I0 505 aaKnown RBP28.32■■■□□ 2.12
SPTBN4-210ENST00000596900 SLC27A3Q5K4L6 730 aa28.32■■■□□ 2.12
SPTBN4-210ENST00000596900 TTC22Q5TAA0 569 aa28.32■■■□□ 2.12
SPTBN4-210ENST00000596900 FAM89AQ96GI7 184 aa28.32■■■□□ 2.12
SPTBN4-210ENST00000596900 IL1RAPL2Q9NP60 686 aa28.32■■■□□ 2.12
SPTBN4-210ENST00000596900 TRMT112Q9UI30 125 aaKnown RBP28.32■■■□□ 2.12
SPTBN4-210ENST00000596900 CHMP3Q9Y3E7 222 aa28.32■■■□□ 2.12
SPTBN4-210ENST00000596900 SCN7AQ01118 1682 aa28.31■■■□□ 2.12
SPTBN4-210ENST00000596900 GNPATO15228 680 aa28.31■■■□□ 2.12
SPTBN4-210ENST00000596900 CLASRPQ8N2M8 674 aaKnown RBP28.31■■■□□ 2.12
SPTBN4-210ENST00000596900 OTUD7AQ8TE49 926 aaPredicted RBP28.31■■■□□ 2.12
SPTBN4-210ENST00000596900 MX1P20591 662 aa28.3■■■□□ 2.12
SPTBN4-210ENST00000596900 PDE1AP54750 535 aa28.3■■■□□ 2.12
SPTBN4-210ENST00000596900 UBN2Q6ZU65 1347 aa28.3■■■□□ 2.12
SPTBN4-210ENST00000596900 RFX5P48382 616 aaPredicted RBP28.29■■■□□ 2.12
SPTBN4-210ENST00000596900 SALL3Q9BXA9 1300 aa28.29■■■□□ 2.12
SPTBN4-210ENST00000596900 MYH3P11055 1940 aa28.29■■■□□ 2.12
SPTBN4-210ENST00000596900 PTPN12Q05209 780 aaKnown RBP28.28■■■□□ 2.12
SPTBN4-210ENST00000596900 AK7Q96M32 723 aa28.28■■■□□ 2.12
SPTBN4-210ENST00000596900 SIL1Q9H173 461 aa28.27■■■□□ 2.12
SPTBN4-210ENST00000596900 AOX1Q06278 1338 aa28.27■■■□□ 2.12
SPTBN4-210ENST00000596900 HSP90B1P14625 803 aaKnown RBP28.27■■■□□ 2.12
SPTBN4-210ENST00000596900 NIP7Q9Y221 180 aaKnown RBP eCLIP28.27■■■□□ 2.12
SPTBN4-210ENST00000596900 STAP2Q9UGK3 403 aa28.26■■■□□ 2.11
SPTBN4-210ENST00000596900 NARFQ9UHQ1 456 aa28.26■■■□□ 2.11
SPTBN4-210ENST00000596900 IRS4O14654 1257 aaPredicted RBP28.25■■■□□ 2.11
SPTBN4-210ENST00000596900 GSPT1P15170 499 aaKnown RBP28.25■■■□□ 2.11
SPTBN4-210ENST00000596900 UTP14AQ9BVJ6 771 aaKnown RBP28.25■■■□□ 2.11
SPTBN4-210ENST00000596900 SH3TC1Q8TE82 1336 aa28.25■■■□□ 2.11
SPTBN4-210ENST00000596900 CCDC57Q2TAC2 916 aa28.25■■■□□ 2.11
SPTBN4-210ENST00000596900 KLHDC4Q8TBB5 520 aa28.25■■■□□ 2.11
SPTBN4-210ENST00000596900 EP400Q96L91 3159 aa28.24■■■□□ 2.11
SPTBN4-210ENST00000596900 ZPR1O75312 459 aa28.24■■■□□ 2.11
SPTBN4-210ENST00000596900 UPF2Q9HAU5 1272 aaKnown RBP28.24■■■□□ 2.11
SPTBN4-210ENST00000596900 RGS17Q9UGC6 210 aaPredicted RBP28.24■■■□□ 2.11
SPTBN4-210ENST00000596900 PDE8AO60658 829 aa28.23■■■□□ 2.11
SPTBN4-210ENST00000596900 SASH1O94885 1247 aa28.23■■■□□ 2.11
SPTBN4-210ENST00000596900 LRRC4BQ9NT99 713 aa28.23■■■□□ 2.11
SPTBN4-210ENST00000596900 CSF1RP07333 972 aa28.23■■■□□ 2.11
SPTBN4-210ENST00000596900 SUSD4Q5VX71 490 aa28.23■■■□□ 2.11
SPTBN4-210ENST00000596900 GPATCH3Q96I76 525 aa28.23■■■□□ 2.11
SPTBN4-210ENST00000596900 ADRA2BP18089 450 aa28.22■■■□□ 2.11
SPTBN4-210ENST00000596900 NUTM1Q86Y26 1132 aa28.22■■■□□ 2.11
SPTBN4-210ENST00000596900 EIF5BO60841 1220 aaKnown RBP28.21■■■□□ 2.11
SPTBN4-210ENST00000596900 IFIT2P09913 472 aaKnown RBP28.21■■■□□ 2.11
SPTBN4-210ENST00000596900 ANP32AP39687 249 aaKnown RBP28.21■■■□□ 2.11
SPTBN4-210ENST00000596900 CTSWP56202 376 aa28.21■■■□□ 2.11
SPTBN4-210ENST00000596900 FBXO3Q9UK99 471 aa28.21■■■□□ 2.11
SPTBN4-210ENST00000596900 C4AP0C0L4 1744 aa28.21■■■□□ 2.11
SPTBN4-210ENST00000596900 TTC41PQ6P2S7 1318 aa28.21■■■□□ 2.11
SPTBN4-210ENST00000596900 LAMB2P55268 1798 aa28.21■■■□□ 2.11
SPTBN4-210ENST00000596900 TRAPPC3LQ5T215 181 aa28.21■■■□□ 2.11
SPTBN4-210ENST00000596900 CDC45O75419 566 aa28.2■■■□□ 2.1
SPTBN4-210ENST00000596900 IFIT5Q13325 482 aaKnown RBP28.2■■■□□ 2.1
SPTBN4-210ENST00000596900 POTEAQ6S8J7 498 aa28.2■■■□□ 2.1
SPTBN4-210ENST00000596900 PLSCR1O15162 318 aa28.19■■■□□ 2.1
SPTBN4-210ENST00000596900 USPL1Q5W0Q7 1092 aa28.19■■■□□ 2.1
SPTBN4-210ENST00000596900 USP42Q9H9J4 1324 aaKnown RBP28.19■■■□□ 2.1
SPTBN4-210ENST00000596900 UBR3Q6ZT12 1888 aa28.19■■■□□ 2.1
SPTBN4-210ENST00000596900 RFC4P35249 363 aa28.19■■■□□ 2.1
SPTBN4-210ENST00000596900 AACSQ86V21 672 aa28.19■■■□□ 2.1
SPTBN4-210ENST00000596900 SYNE4Q8N205 404 aa28.19■■■□□ 2.1
SPTBN4-210ENST00000596900 TTLL11Q8NHH1 800 aa28.19■■■□□ 2.1
SPTBN4-210ENST00000596900 ARHGEF1Q92888 912 aaKnown RBP28.19■■■□□ 2.1
SPTBN4-210ENST00000596900 TUBGCP6Q96RT7 1819 aa28.19■■■□□ 2.1
SPTBN4-210ENST00000596900 CIAO1O76071 339 aa28.18■■■□□ 2.1
SPTBN4-210ENST00000596900 NTSR2O95665 410 aa28.18■■■□□ 2.1
SPTBN4-210ENST00000596900 IL15P40933 162 aaPredicted RBP28.18■■■□□ 2.1
SPTBN4-210ENST00000596900 TXNRD1Q16881 649 aa28.18■■■□□ 2.1
SPTBN4-210ENST00000596900 TAF7LQ5H9L4 462 aa28.18■■■□□ 2.1
SPTBN4-210ENST00000596900 ERC2O15083 957 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms