RNA–Protein interactions for RNA: ENST00000595770.1

ARHGEF1-212, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-212ENST00000595770 LTBP3Q9NS15 1303 aa18.73■□□□□ 0.59
ARHGEF1-212ENST00000595770 ZC3H4Q9UPT8 1303 aaKnown RBP18.73■□□□□ 0.59
ARHGEF1-212ENST00000595770 ALDH1B1P30837 517 aa18.72■□□□□ 0.59
ARHGEF1-212ENST00000595770 PLBD2Q8NHP8 589 aa18.72■□□□□ 0.59
ARHGEF1-212ENST00000595770 NMRK2Q9NPI5 230 aa18.72■□□□□ 0.59
ARHGEF1-212ENST00000595770 ANKRD36CQ5JPF3 1778 aa18.72■□□□□ 0.59
ARHGEF1-212ENST00000595770 HOXA10P31260 410 aaPredicted RBP18.71■□□□□ 0.59
ARHGEF1-212ENST00000595770 SLC10A5Q5PT55 438 aa18.71■□□□□ 0.59
ARHGEF1-212ENST00000595770 ANKRD13DQ6ZTN6 518 aa18.71■□□□□ 0.59
ARHGEF1-212ENST00000595770 NLRP10Q86W26 655 aa18.71■□□□□ 0.59
ARHGEF1-212ENST00000595770 TAOK3Q9H2K8 898 aa18.71■□□□□ 0.59
ARHGEF1-212ENST00000595770 C3orf67Q6ZVT6 689 aa18.7■□□□□ 0.58
ARHGEF1-212ENST00000595770 TSR2Q969E8 191 aaKnown RBP18.7■□□□□ 0.58
ARHGEF1-212ENST00000595770 RNF123Q5XPI4 1314 aa18.7■□□□□ 0.58
ARHGEF1-212ENST00000595770 KDM2BQ8NHM5 1336 aa18.7■□□□□ 0.58
ARHGEF1-212ENST00000595770 CCDC93Q567U6 631 aa18.69■□□□□ 0.58
ARHGEF1-212ENST00000595770 TSPYL6Q8N831 410 aa18.69■□□□□ 0.58
ARHGEF1-212ENST00000595770 RPGRQ92834 1020 aaKnown RBP18.69■□□□□ 0.58
ARHGEF1-212ENST00000595770 IL16Q14005 1332 aa18.69■□□□□ 0.58
ARHGEF1-212ENST00000595770 OLFM4Q6UX06 510 aa18.68■□□□□ 0.58
ARHGEF1-212ENST00000595770 NLRP3Q96P20 1036 aa18.68■□□□□ 0.58
ARHGEF1-212ENST00000595770 DICER1Q9UPY3 1922 aaKnown RBP18.68■□□□□ 0.58
ARHGEF1-212ENST00000595770 TIAM2Q8IVF5 1701 aa18.68■□□□□ 0.58
ARHGEF1-212ENST00000595770 GLTPD2A6NH11 291 aa18.67■□□□□ 0.58
ARHGEF1-212ENST00000595770 CCDC30Q5VVM6 783 aa18.67■□□□□ 0.58
ARHGEF1-212ENST00000595770 RTKN2Q8IZC4 609 aa18.67■□□□□ 0.58
ARHGEF1-212ENST00000595770 RBM17Q96I25 401 aaKnown RBP18.67■□□□□ 0.58
ARHGEF1-212ENST00000595770 CRAMP1Q96RY5 1269 aa18.67■□□□□ 0.58
ARHGEF1-212ENST00000595770 ISCA1Q9BUE6 129 aa18.67■□□□□ 0.58
ARHGEF1-212ENST00000595770 CHMP4AQ9BY43 222 aa18.67■□□□□ 0.58
ARHGEF1-212ENST00000595770 PHAXQ9H814 394 aaKnown RBP18.67■□□□□ 0.58
ARHGEF1-212ENST00000595770 TRMT112Q9UI30 125 aaKnown RBP18.67■□□□□ 0.58
ARHGEF1-212ENST00000595770 FAM9BQ8IZU0 186 aa18.66■□□□□ 0.58
ARHGEF1-212ENST00000595770 SYNE4Q8N205 404 aa18.66■□□□□ 0.58
ARHGEF1-212ENST00000595770 RRAGCQ9HB90 399 aa18.66■□□□□ 0.58
ARHGEF1-212ENST00000595770 SH3TC1Q8TE82 1336 aa18.66■□□□□ 0.58
ARHGEF1-212ENST00000595770 TOMM70O94826 608 aa18.65■□□□□ 0.58
ARHGEF1-212ENST00000595770 FKBP4Q02790 459 aaKnown RBP eCLIP18.65■□□□□ 0.58
ARHGEF1-212ENST00000595770 WDR63Q8IWG1 891 aa18.65■□□□□ 0.58
ARHGEF1-212ENST00000595770 SALL2Q9Y467 1007 aaPredicted RBP18.65■□□□□ 0.58
ARHGEF1-212ENST00000595770 SNED1Q8TER0 1413 aa18.65■□□□□ 0.58
ARHGEF1-212ENST00000595770 ATP5J2-PTCD1G3V325 749 aa18.64■□□□□ 0.57
ARHGEF1-212ENST00000595770 HCLS1P14317 486 aaPredicted RBP18.64■□□□□ 0.57
ARHGEF1-212ENST00000595770 GOLGA2Q08379 1002 aa18.64■□□□□ 0.57
ARHGEF1-212ENST00000595770 TRIM28Q13263 835 aaKnown RBP18.64■□□□□ 0.57
ARHGEF1-212ENST00000595770 RIC3Q7Z5B4 369 aa18.64■□□□□ 0.57
ARHGEF1-212ENST00000595770 TWISTNBQ3B726 338 aaPredicted RBP18.63■□□□□ 0.57
ARHGEF1-212ENST00000595770 CC2D2BQ6DHV5 1058 aa18.63■□□□□ 0.57
ARHGEF1-212ENST00000595770 ZNF428Q96B54 188 aa18.63■□□□□ 0.57
ARHGEF1-212ENST00000595770 LAMB2P55268 1798 aa18.63■□□□□ 0.57
ARHGEF1-212ENST00000595770 DPY19L2Q6NUT2 758 aa18.62■□□□□ 0.57
ARHGEF1-212ENST00000595770 ZNF277Q9NRM2 450 aaPredicted RBP18.62■□□□□ 0.57
ARHGEF1-212ENST00000595770 ABCC4O15439 1325 aa18.61■□□□□ 0.57
ARHGEF1-212ENST00000595770 FANCIQ9NVI1 1328 aa18.61■□□□□ 0.57
ARHGEF1-212ENST00000595770 PPEF1O14829 653 aaPredicted RBP18.61■□□□□ 0.57
ARHGEF1-212ENST00000595770 RBM46Q8TBY0 533 aaKnown RBP18.61■□□□□ 0.57
ARHGEF1-212ENST00000595770 FAM89AQ96GI7 184 aa18.61■□□□□ 0.57
ARHGEF1-212ENST00000595770 PSMD1Q99460 953 aa18.61■□□□□ 0.57
ARHGEF1-212ENST00000595770 VEGFAP15692 232 aaPredicted RBP18.6■□□□□ 0.57
ARHGEF1-212ENST00000595770 HSPA6P17066 643 aa18.6■□□□□ 0.57
ARHGEF1-212ENST00000595770 GRIPAP1Q4V328 841 aa18.6■□□□□ 0.57
ARHGEF1-212ENST00000595770 SLC51AQ86UW1 340 aa18.6■□□□□ 0.57
ARHGEF1-212ENST00000595770 C16orf71Q8IYS4 520 aaPredicted RBP18.6■□□□□ 0.57
ARHGEF1-212ENST00000595770 POTECB2RU33 542 aa18.59■□□□□ 0.57
ARHGEF1-212ENST00000595770 TCERG1O14776 1098 aaKnown RBP18.59■□□□□ 0.57
ARHGEF1-212ENST00000595770 DDX58O95786 925 aaKnown RBP18.59■□□□□ 0.57
ARHGEF1-212ENST00000595770 IARSP41252 1262 aaKnown RBP18.59■□□□□ 0.57
ARHGEF1-212ENST00000595770 MYD88Q99836 296 aa18.59■□□□□ 0.57
ARHGEF1-212ENST00000595770 STK31Q9BXU1 1019 aa18.59■□□□□ 0.57
ARHGEF1-212ENST00000595770 DDX60Q8IY21 1712 aaKnown RBP18.59■□□□□ 0.57
ARHGEF1-212ENST00000595770 WDR90Q96KV7 1748 aa18.59■□□□□ 0.57
ARHGEF1-212ENST00000595770 BBOX1O75936 387 aa18.58■□□□□ 0.56
ARHGEF1-212ENST00000595770 METTL22Q9BUU2 404 aaPredicted RBP18.58■□□□□ 0.56
ARHGEF1-212ENST00000595770 SPINK5Q9NQ38 1064 aaPredicted RBP18.58■□□□□ 0.56
ARHGEF1-212ENST00000595770 ATP6V0A2Q9Y487 856 aa18.58■□□□□ 0.56
ARHGEF1-212ENST00000595770 VAMP4O75379 141 aa18.57■□□□□ 0.56
ARHGEF1-212ENST00000595770 DDNO94850 711 aaPredicted RBP18.57■□□□□ 0.56
ARHGEF1-212ENST00000595770 SLC4A2P04920 1241 aa18.57■□□□□ 0.56
ARHGEF1-212ENST00000595770 SF3B3Q15393 1217 aaKnown RBP18.57■□□□□ 0.56
ARHGEF1-212ENST00000595770 RTL5Q5HYW3 569 aaPredicted RBP18.57■□□□□ 0.56
ARHGEF1-212ENST00000595770 KSR2Q6VAB6 950 aa18.57■□□□□ 0.56
ARHGEF1-212ENST00000595770 DDX46Q7L014 1031 aaKnown RBP18.57■□□□□ 0.56
ARHGEF1-212ENST00000595770 ZBTB38Q8NAP3 1195 aaPredicted RBP18.57■□□□□ 0.56
ARHGEF1-212ENST00000595770 CCDC191Q8NCU4 936 aa18.57■□□□□ 0.56
ARHGEF1-212ENST00000595770 MAP3K2Q9Y2U5 619 aa18.57■□□□□ 0.56
ARHGEF1-212ENST00000595770 PI4KAP2A4QPH2 592 aa18.56■□□□□ 0.56
ARHGEF1-212ENST00000595770 IRS4O14654 1257 aaPredicted RBP18.56■□□□□ 0.56
ARHGEF1-212ENST00000595770 EXOSC9Q06265 439 aaKnown RBP18.56■□□□□ 0.56
ARHGEF1-212ENST00000595770 GRAPQ13588 217 aa18.56■□□□□ 0.56
ARHGEF1-212ENST00000595770 G2E3Q7L622 706 aa18.56■□□□□ 0.56
ARHGEF1-212ENST00000595770 SP8Q8IXZ3 490 aa18.56■□□□□ 0.56
ARHGEF1-212ENST00000595770 PI4KAP1Q8N8J0 262 aa18.56■□□□□ 0.56
ARHGEF1-212ENST00000595770 GRAPLQ8TC17 118 aaPredicted RBP18.56■□□□□ 0.56
ARHGEF1-212ENST00000595770 TAF1P21675 1872 aa18.55■□□□□ 0.56
ARHGEF1-212ENST00000595770 FZD9O00144 591 aa18.55■□□□□ 0.56
ARHGEF1-212ENST00000595770 FSTL1Q12841 308 aa18.55■□□□□ 0.56
ARHGEF1-212ENST00000595770 TMX4Q9H1E5 349 aaPredicted RBP18.55■□□□□ 0.56
ARHGEF1-212ENST00000595770 ZNF541Q9H0D2 1346 aa18.54■□□□□ 0.56
ARHGEF1-212ENST00000595770 PCCAP05165 728 aaPredicted RBP18.54■□□□□ 0.56
ARHGEF1-212ENST00000595770 MYH16Q9H6N6 1097 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms