RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 CNTROBQ8N137 903 aa20.62■□□□□ 0.89
SHKBP1-205ENST00000594973 ZBTB3Q9H5J0 574 aa20.62■□□□□ 0.89
SHKBP1-205ENST00000594973 FAM13BQ9NYF5 915 aa20.62■□□□□ 0.89
SHKBP1-205ENST00000594973 ZNF330Q9Y3S2 320 aaPredicted RBP20.62■□□□□ 0.89
SHKBP1-205ENST00000594973 ASAP1Q9ULH1 1129 aa20.61■□□□□ 0.89
SHKBP1-205ENST00000594973 TTC41PQ6P2S7 1318 aa20.61■□□□□ 0.89
SHKBP1-205ENST00000594973 GLRX3O76003 335 aaKnown RBP20.61■□□□□ 0.89
SHKBP1-205ENST00000594973 PIGBQ92521 554 aa20.61■□□□□ 0.89
SHKBP1-205ENST00000594973 ECHDC1Q9NTX5 307 aa20.61■□□□□ 0.89
SHKBP1-205ENST00000594973 UTP14CQ5TAP6 766 aaKnown RBP20.6■□□□□ 0.89
SHKBP1-205ENST00000594973 CCDC8Q9H0W5 538 aaPredicted RBP20.6■□□□□ 0.89
SHKBP1-205ENST00000594973 NOL7Q9UMY1 257 aaKnown RBP20.6■□□□□ 0.89
SHKBP1-205ENST00000594973 LAMB4A4D0S4 1761 aa20.6■□□□□ 0.89
SHKBP1-205ENST00000594973 CLEC17AQ6ZS10 378 aa20.6■□□□□ 0.89
SHKBP1-205ENST00000594973 EAF2Q96CJ1 260 aaPredicted RBP20.6■□□□□ 0.89
SHKBP1-205ENST00000594973 GPATCH3Q96I76 525 aa20.6■□□□□ 0.89
SHKBP1-205ENST00000594973 USP42Q9H9J4 1324 aaKnown RBP20.6■□□□□ 0.89
SHKBP1-205ENST00000594973 CSPP1Q1MSJ5 1256 aa20.59■□□□□ 0.89
SHKBP1-205ENST00000594973 R3HCC1Q9Y3T6 440 aaKnown RBP20.59■□□□□ 0.89
SHKBP1-205ENST00000594973 ST18O60284 1047 aa20.59■□□□□ 0.89
SHKBP1-205ENST00000594973 ADAMTS2O95450 1211 aa20.59■□□□□ 0.89
SHKBP1-205ENST00000594973 PALD1Q9ULE6 856 aa20.59■□□□□ 0.89
SHKBP1-205ENST00000594973 TNS2Q63HR2 1409 aa20.58■□□□□ 0.89
SHKBP1-205ENST00000594973 UBR2Q8IWV8 1755 aa20.58■□□□□ 0.89
SHKBP1-205ENST00000594973 ARFGEF2Q9Y6D5 1785 aa20.58■□□□□ 0.89
SHKBP1-205ENST00000594973 MCCP23508 829 aa20.58■□□□□ 0.89
SHKBP1-205ENST00000594973 TLR7Q9NYK1 1049 aaKnown RBP20.58■□□□□ 0.89
SHKBP1-205ENST00000594973 GOLGA6L22H0YM25 854 aa20.58■□□□□ 0.88
SHKBP1-205ENST00000594973 TOGARAM1Q9Y4F4 1720 aa20.57■□□□□ 0.88
SHKBP1-205ENST00000594973 KLHL40Q2TBA0 621 aa20.57■□□□□ 0.88
SHKBP1-205ENST00000594973 CWC27Q6UX04 472 aaKnown RBP20.57■□□□□ 0.88
SHKBP1-205ENST00000594973 UQCRHLA0A096LP55 91 aa20.56■□□□□ 0.88
SHKBP1-205ENST00000594973 UQCRHP07919 91 aa20.56■□□□□ 0.88
SHKBP1-205ENST00000594973 MCM5P33992 734 aa20.56■□□□□ 0.88
SHKBP1-205ENST00000594973 SYTL4Q96C24 671 aaPredicted RBP20.56■□□□□ 0.88
SHKBP1-205ENST00000594973 CHMP3Q9Y3E7 222 aa20.56■□□□□ 0.88
SHKBP1-205ENST00000594973 DNAJC10Q8IXB1 793 aa20.56■□□□□ 0.88
SHKBP1-205ENST00000594973 ATG3Q9NT62 314 aa20.56■□□□□ 0.88
SHKBP1-205ENST00000594973 CWC25Q9NXE8 425 aaPredicted RBP20.56■□□□□ 0.88
SHKBP1-205ENST00000594973 AFDNP55196 1824 aaKnown RBP20.56■□□□□ 0.88
SHKBP1-205ENST00000594973 PAPPAQ13219 1627 aa20.55■□□□□ 0.88
SHKBP1-205ENST00000594973 NEK4P51957 841 aa20.55■□□□□ 0.88
SHKBP1-205ENST00000594973 CASP7P55210 303 aa20.55■□□□□ 0.88
SHKBP1-205ENST00000594973 RFX5P48382 616 aaPredicted RBP20.55■□□□□ 0.88
SHKBP1-205ENST00000594973 ZNF445P59923 1031 aa20.55■□□□□ 0.88
SHKBP1-205ENST00000594973 FGD1P98174 961 aa20.55■□□□□ 0.88
SHKBP1-205ENST00000594973 PTPN12Q05209 780 aaKnown RBP20.55■□□□□ 0.88
SHKBP1-205ENST00000594973 RABL6Q3YEC7 729 aaPredicted RBP20.55■□□□□ 0.88
SHKBP1-205ENST00000594973 LMBR1LQ6UX01 489 aa20.55■□□□□ 0.88
SHKBP1-205ENST00000594973 EXOC5O00471 708 aa20.54■□□□□ 0.88
SHKBP1-205ENST00000594973 SGSM2O43147 1006 aa20.54■□□□□ 0.88
SHKBP1-205ENST00000594973 COPRSQ9NQ92 184 aa20.54■□□□□ 0.88
SHKBP1-205ENST00000594973 COL14A1Q05707 1796 aaKnown RBP20.54■□□□□ 0.88
SHKBP1-205ENST00000594973 PDLIM2Q96JY6 352 aa20.54■□□□□ 0.88
SHKBP1-205ENST00000594973 DIAPH3Q9NSV4 1193 aa20.54■□□□□ 0.88
SHKBP1-205ENST00000594973 A0A0U1RQG5 324 aaPredicted RBP20.53■□□□□ 0.88
SHKBP1-205ENST00000594973 KAT6BQ8WYB5 2073 aa20.53■□□□□ 0.88
SHKBP1-205ENST00000594973 DISP2A7MBM2 1401 aa20.53■□□□□ 0.88
SHKBP1-205ENST00000594973 H7C1W4 665 aa20.53■□□□□ 0.88
SHKBP1-205ENST00000594973 AK9Q5TCS8 1911 aa20.52■□□□□ 0.88
SHKBP1-205ENST00000594973 TFCP2Q12800 502 aa20.52■□□□□ 0.88
SHKBP1-205ENST00000594973 BOLA2Q9H3K6 86 aa20.52■□□□□ 0.88
SHKBP1-205ENST00000594973 AHDC1Q5TGY3 1603 aaPredicted RBP20.52■□□□□ 0.88
SHKBP1-205ENST00000594973 FOXO4P98177 505 aa20.52■□□□□ 0.87
SHKBP1-205ENST00000594973 DMTNQ08495 405 aa20.52■□□□□ 0.87
SHKBP1-205ENST00000594973 NUTM2BA6NNL0 878 aaPredicted RBP20.51■□□□□ 0.87
SHKBP1-205ENST00000594973 NUTM2EB1AL46 878 aaPredicted RBP20.51■□□□□ 0.87
SHKBP1-205ENST00000594973 NCLP19338 710 aaKnown RBP20.51■□□□□ 0.87
SHKBP1-205ENST00000594973 PIP4K2BP78356 416 aa20.51■□□□□ 0.87
SHKBP1-205ENST00000594973 NUTM2AQ8IVF1 878 aaPredicted RBP20.51■□□□□ 0.87
SHKBP1-205ENST00000594973 COL16A1Q07092 1604 aaPredicted RBP20.51■□□□□ 0.87
SHKBP1-205ENST00000594973 A0A0G2JS52 829 aa20.5■□□□□ 0.87
SHKBP1-205ENST00000594973 STARD3NLO95772 234 aa20.5■□□□□ 0.87
SHKBP1-205ENST00000594973 ANAPC15P60006 121 aa20.5■□□□□ 0.87
SHKBP1-205ENST00000594973 CCDC191Q8NCU4 936 aa20.5■□□□□ 0.87
SHKBP1-205ENST00000594973 EVI5LQ96CN4 794 aa20.5■□□□□ 0.87
SHKBP1-205ENST00000594973 UPF3BQ9BZI7 483 aaKnown RBP20.5■□□□□ 0.87
SHKBP1-205ENST00000594973 SASS6Q6UVJ0 657 aa20.5■□□□□ 0.87
SHKBP1-205ENST00000594973 TEX13AQ9BXU3 409 aaPredicted RBP20.5■□□□□ 0.87
SHKBP1-205ENST00000594973 COL15A1P39059 1388 aa20.5■□□□□ 0.87
SHKBP1-205ENST00000594973 NOL8Q76FK4 1167 aaKnown RBP20.49■□□□□ 0.87
SHKBP1-205ENST00000594973 CCDC94Q9BW85 323 aaPredicted RBP20.49■□□□□ 0.87
SHKBP1-205ENST00000594973 LSG1Q9H089 658 aaKnown RBP20.49■□□□□ 0.87
SHKBP1-205ENST00000594973 RAD50Q92878 1312 aa20.49■□□□□ 0.87
SHKBP1-205ENST00000594973 HSPA4P34932 840 aa20.49■□□□□ 0.87
SHKBP1-205ENST00000594973 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.49■□□□□ 0.87
SHKBP1-205ENST00000594973 ZKSCAN5Q9Y2L8 839 aa20.49■□□□□ 0.87
SHKBP1-205ENST00000594973 TNNI3KQ59H18 835 aa20.48■□□□□ 0.87
SHKBP1-205ENST00000594973 KIF6Q6ZMV9 814 aa20.48■□□□□ 0.87
SHKBP1-205ENST00000594973 DDX49Q9Y6V7 483 aaKnown RBP20.48■□□□□ 0.87
SHKBP1-205ENST00000594973 FPGT-TNNI3KV9GXZ4 949 aa20.48■□□□□ 0.87
SHKBP1-205ENST00000594973 PRIM1P49642 420 aaKnown RBP20.48■□□□□ 0.87
SHKBP1-205ENST00000594973 ZGPATQ8N5A5 531 aaKnown RBP20.48■□□□□ 0.87
SHKBP1-205ENST00000594973 SLC4A9Q96Q91 983 aa20.48■□□□□ 0.87
SHKBP1-205ENST00000594973 DBNLQ9UJU6 430 aaKnown RBP20.48■□□□□ 0.87
SHKBP1-205ENST00000594973 CCDC9Q9Y3X0 531 aaKnown RBP20.48■□□□□ 0.87
SHKBP1-205ENST00000594973 LTBP4Q8N2S1 1624 aa20.48■□□□□ 0.87
SHKBP1-205ENST00000594973 BCL9O00512 1426 aa20.48■□□□□ 0.87
SHKBP1-205ENST00000594973 COL22A1Q8NFW1 1626 aaPredicted RBP20.47■□□□□ 0.87
SHKBP1-205ENST00000594973 SSFA2P28290 1259 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms