RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 TTLL7Q6ZT98 887 aa17.3■□□□□ 0.36
RANBP3-229ENST00000592771 ARXQ96QS3 562 aa17.3■□□□□ 0.36
RANBP3-229ENST00000592771 FOXD4L1Q9NU39 408 aa17.3■□□□□ 0.36
RANBP3-229ENST00000592771 DDX49Q9Y6V7 483 aaKnown RBP17.3■□□□□ 0.36
RANBP3-229ENST00000592771 SASH1O94885 1247 aa17.29■□□□□ 0.36
RANBP3-229ENST00000592771 CCDC173Q0VFZ6 552 aa17.29■□□□□ 0.36
RANBP3-229ENST00000592771 GAS2L3Q86XJ1 694 aa17.29■□□□□ 0.36
RANBP3-229ENST00000592771 RILPL2Q969X0 211 aa17.29■□□□□ 0.36
RANBP3-229ENST00000592771 TEX13AQ9BXU3 409 aaPredicted RBP17.29■□□□□ 0.36
RANBP3-229ENST00000592771 ATG3Q9NT62 314 aa17.29■□□□□ 0.36
RANBP3-229ENST00000592771 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.29■□□□□ 0.36
RANBP3-229ENST00000592771 H7C1W4 665 aa17.29■□□□□ 0.36
RANBP3-229ENST00000592771 GLRX3O76003 335 aaKnown RBP17.29■□□□□ 0.36
RANBP3-229ENST00000592771 RFX5P48382 616 aaPredicted RBP17.29■□□□□ 0.36
RANBP3-229ENST00000592771 ZNF445P59923 1031 aa17.29■□□□□ 0.36
RANBP3-229ENST00000592771 G3BP1Q13283 466 aaKnown RBP eCLIP17.29■□□□□ 0.36
RANBP3-229ENST00000592771 TRIM44Q96DX7 344 aaPredicted RBP17.29■□□□□ 0.36
RANBP3-229ENST00000592771 IL17RAQ96F46 866 aa17.29■□□□□ 0.36
RANBP3-229ENST00000592771 COPRSQ9NQ92 184 aa17.29■□□□□ 0.36
RANBP3-229ENST00000592771 ASAP1Q9ULH1 1129 aa17.29■□□□□ 0.36
RANBP3-229ENST00000592771 NWD2Q9ULI1 1742 aa17.28■□□□□ 0.36
RANBP3-229ENST00000592771 A0A087WZG4 1122 aa17.28■□□□□ 0.36
RANBP3-229ENST00000592771 ATP5J2-PTCD1G3V325 749 aa17.28■□□□□ 0.36
RANBP3-229ENST00000592771 ANAPC15P60006 121 aa17.28■□□□□ 0.36
RANBP3-229ENST00000592771 UBE3BQ7Z3V4 1068 aa17.28■□□□□ 0.36
RANBP3-229ENST00000592771 ESPNB1AK53 854 aa17.27■□□□□ 0.36
RANBP3-229ENST00000592771 ANP32BQ92688 251 aaKnown RBP17.27■□□□□ 0.36
RANBP3-229ENST00000592771 PPP1R9BQ96SB3 815 aa17.27■□□□□ 0.36
RANBP3-229ENST00000592771 CDCA7Q9BWT1 371 aaPredicted RBP17.27■□□□□ 0.36
RANBP3-229ENST00000592771 ECHDC1Q9NTX5 307 aa17.27■□□□□ 0.36
RANBP3-229ENST00000592771 MCCP23508 829 aa17.27■□□□□ 0.35
RANBP3-229ENST00000592771 THRAP3Q9Y2W1 955 aaKnown RBP17.27■□□□□ 0.35
RANBP3-229ENST00000592771 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.26■□□□□ 0.35
RANBP3-229ENST00000592771 EXOC5O00471 708 aa17.26■□□□□ 0.35
RANBP3-229ENST00000592771 CNTROBQ8N137 903 aa17.26■□□□□ 0.35
RANBP3-229ENST00000592771 CCDC191Q8NCU4 936 aa17.26■□□□□ 0.35
RANBP3-229ENST00000592771 GPATCH3Q96I76 525 aa17.26■□□□□ 0.35
RANBP3-229ENST00000592771 CWC25Q9NXE8 425 aaPredicted RBP17.26■□□□□ 0.35
RANBP3-229ENST00000592771 SPATA31A1Q5TZJ5 1347 aa17.26■□□□□ 0.35
RANBP3-229ENST00000592771 IFIT2P09913 472 aaKnown RBP17.25■□□□□ 0.35
RANBP3-229ENST00000592771 DNAJC10Q8IXB1 793 aa17.25■□□□□ 0.35
RANBP3-229ENST00000592771 LMBRD1Q9NUN5 540 aa17.25■□□□□ 0.35
RANBP3-229ENST00000592771 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.25■□□□□ 0.35
RANBP3-229ENST00000592771 DOT1LQ8TEK3 1739 aa17.25■□□□□ 0.35
RANBP3-229ENST00000592771 PTPN12Q05209 780 aaKnown RBP17.25■□□□□ 0.35
RANBP3-229ENST00000592771 AACSQ86V21 672 aa17.25■□□□□ 0.35
RANBP3-229ENST00000592771 EAF2Q96CJ1 260 aaPredicted RBP17.25■□□□□ 0.35
RANBP3-229ENST00000592771 FOXO4P98177 505 aa17.24■□□□□ 0.35
RANBP3-229ENST00000592771 JARID2Q92833 1246 aaPredicted RBP17.24■□□□□ 0.35
RANBP3-229ENST00000592771 ISCA1Q9BUE6 129 aa17.24■□□□□ 0.35
RANBP3-229ENST00000592771 SLIT2O94813 1529 aa17.24■□□□□ 0.35
RANBP3-229ENST00000592771 STARD3NLO95772 234 aa17.23■□□□□ 0.35
RANBP3-229ENST00000592771 NASPP49321 788 aaPredicted RBP17.23■□□□□ 0.35
RANBP3-229ENST00000592771 KLHDC4Q8TBB5 520 aa17.23■□□□□ 0.35
RANBP3-229ENST00000592771 ZBTB3Q9H5J0 574 aa17.23■□□□□ 0.35
RANBP3-229ENST00000592771 TRIM28Q13263 835 aaKnown RBP17.23■□□□□ 0.35
RANBP3-229ENST00000592771 SPATA31A6Q5VVP1 1343 aa17.23■□□□□ 0.35
RANBP3-229ENST00000592771 MCTP1Q6DN14 999 aa17.23■□□□□ 0.35
RANBP3-229ENST00000592771 INTS4Q96HW7 963 aaKnown RBP17.23■□□□□ 0.35
RANBP3-229ENST00000592771 IL25Q9H293 177 aa17.23■□□□□ 0.35
RANBP3-229ENST00000592771 SGSM2O43147 1006 aa17.22■□□□□ 0.35
RANBP3-229ENST00000592771 MAP4K4O95819 1239 aaPredicted RBP17.22■□□□□ 0.35
RANBP3-229ENST00000592771 FBXO41Q8TF61 875 aa17.22■□□□□ 0.35
RANBP3-229ENST00000592771 SLC4A9Q96Q91 983 aa17.22■□□□□ 0.35
RANBP3-229ENST00000592771 SIL1Q9H173 461 aa17.22■□□□□ 0.35
RANBP3-229ENST00000592771 KAT6BQ8WYB5 2073 aa17.22■□□□□ 0.35
RANBP3-229ENST00000592771 SPATA31A5Q5VU36 1347 aa17.21■□□□□ 0.35
RANBP3-229ENST00000592771 SPATA31A7Q8IWB4 1347 aa17.21■□□□□ 0.35
RANBP3-229ENST00000592771 TCIRG1Q13488 830 aa17.21■□□□□ 0.35
RANBP3-229ENST00000592771 CUL4AQ13619 759 aa17.21■□□□□ 0.35
RANBP3-229ENST00000592771 HS1BP3Q53T59 392 aa17.21■□□□□ 0.35
RANBP3-229ENST00000592771 ANO2Q9NQ90 1003 aa17.21■□□□□ 0.35
RANBP3-229ENST00000592771 LMBR1LQ6UX01 489 aa17.21■□□□□ 0.35
RANBP3-229ENST00000592771 CYP19A1P11511 503 aaPredicted RBP17.2■□□□□ 0.34
RANBP3-229ENST00000592771 MEX3CQ5U5Q3 659 aaKnown RBP17.2■□□□□ 0.34
RANBP3-229ENST00000592771 EVI5LQ96CN4 794 aa17.2■□□□□ 0.34
RANBP3-229ENST00000592771 C8orf37Q96NL8 207 aa17.2■□□□□ 0.34
RANBP3-229ENST00000592771 NGLY1Q96IV0 654 aa17.19■□□□□ 0.34
RANBP3-229ENST00000592771 CCDC8Q9H0W5 538 aaPredicted RBP17.19■□□□□ 0.34
RANBP3-229ENST00000592771 TLR7Q9NYK1 1049 aaKnown RBP17.19■□□□□ 0.34
RANBP3-229ENST00000592771 CICQ96RK0 1608 aaPredicted RBP17.19■□□□□ 0.34
RANBP3-229ENST00000592771 RAD50Q92878 1312 aa17.19■□□□□ 0.34
RANBP3-229ENST00000592771 MBD3O95983 291 aa17.19■□□□□ 0.34
RANBP3-229ENST00000592771 ZSCAN23Q3MJ62 389 aa17.19■□□□□ 0.34
RANBP3-229ENST00000592771 BARGINQ6ZT62 677 aa17.19■□□□□ 0.34
RANBP3-229ENST00000592771 ANKRD36CQ5JPF3 1778 aa17.18■□□□□ 0.34
RANBP3-229ENST00000592771 MAP3K15Q6ZN16 1313 aa17.18■□□□□ 0.34
RANBP3-229ENST00000592771 HSPA4P34932 840 aa17.18■□□□□ 0.34
RANBP3-229ENST00000592771 NEK4P51957 841 aa17.18■□□□□ 0.34
RANBP3-229ENST00000592771 KIF6Q6ZMV9 814 aa17.18■□□□□ 0.34
RANBP3-229ENST00000592771 ZGPATQ8N5A5 531 aaKnown RBP17.18■□□□□ 0.34
RANBP3-229ENST00000592771 TMX3Q96JJ7 454 aa17.18■□□□□ 0.34
RANBP3-229ENST00000592771 LSG1Q9H089 658 aaKnown RBP17.18■□□□□ 0.34
RANBP3-229ENST00000592771 PALD1Q9ULE6 856 aa17.18■□□□□ 0.34
RANBP3-229ENST00000592771 ZDHHC9Q9Y397 364 aa17.18■□□□□ 0.34
RANBP3-229ENST00000592771 PRIM1P49642 420 aaKnown RBP17.17■□□□□ 0.34
RANBP3-229ENST00000592771 DDB1Q16531 1140 aa17.17■□□□□ 0.34
RANBP3-229ENST00000592771 TNNI3KQ59H18 835 aa17.17■□□□□ 0.34
RANBP3-229ENST00000592771 FPGT-TNNI3KV9GXZ4 949 aa17.17■□□□□ 0.34
RANBP3-229ENST00000592771 TFCP2Q12800 502 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms