RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 PIK3C2GO75747 1445 aa11.02□□□□□ -0.64
VMP1-213ENST00000591877 KNDC1Q76NI1 1749 aa11.02□□□□□ -0.65
VMP1-213ENST00000591877 GRM5P41594 1212 aa11.02□□□□□ -0.65
VMP1-213ENST00000591877 GPAT2Q6NUI2 795 aa11.02□□□□□ -0.65
VMP1-213ENST00000591877 MEIOBQ8N635 442 aa11.02□□□□□ -0.65
VMP1-213ENST00000591877 LRRN4Q8WUT4 740 aa11.02□□□□□ -0.65
VMP1-213ENST00000591877 COL25A1Q9BXS0 654 aaPredicted RBP11.02□□□□□ -0.65
VMP1-213ENST00000591877 MAP10Q9P2G4 905 aa11.02□□□□□ -0.65
VMP1-213ENST00000591877 C1orf167Q5SNV9 1468 aa11.01□□□□□ -0.65
VMP1-213ENST00000591877 PATL2C9JE40 543 aaKnown RBP11.01□□□□□ -0.65
VMP1-213ENST00000591877 AGERQ15109 404 aa11.01□□□□□ -0.65
VMP1-213ENST00000591877 C4orf48Q5BLP8 95 aa11.01□□□□□ -0.65
VMP1-213ENST00000591877 LYPD8Q6UX82 237 aa11.01□□□□□ -0.65
VMP1-213ENST00000591877 USTQ9Y2C2 406 aa11.01□□□□□ -0.65
VMP1-213ENST00000591877 LAMC1P11047 1609 aa11.01□□□□□ -0.65
VMP1-213ENST00000591877 NRXN1Q9ULB1 1477 aa11□□□□□ -0.65
VMP1-213ENST00000591877 ZNF385CQ66K41 422 aaPredicted RBP11□□□□□ -0.65
VMP1-213ENST00000591877 TMEM132EQ6IEE7 984 aa11□□□□□ -0.65
VMP1-213ENST00000591877 TSC1Q92574 1164 aa11□□□□□ -0.65
VMP1-213ENST00000591877 DDX17Q92841 729 aaKnown RBP11□□□□□ -0.65
VMP1-213ENST00000591877 ALG2Q9H553 416 aa11□□□□□ -0.65
VMP1-213ENST00000591877 TECPR2O15040 1411 aa11□□□□□ -0.65
VMP1-213ENST00000591877 CFAP70Q5T0N1 1121 aa10.99□□□□□ -0.65
VMP1-213ENST00000591877 POTEAQ6S8J7 498 aa10.99□□□□□ -0.65
VMP1-213ENST00000591877 SVOPQ8N4V2 548 aa10.99□□□□□ -0.65
VMP1-213ENST00000591877 PNMA1Q8ND90 353 aa10.99□□□□□ -0.65
VMP1-213ENST00000591877 LRPPRCP42704 1394 aaKnown RBP10.99□□□□□ -0.65
VMP1-213ENST00000591877 MYOM2P54296 1465 aa10.99□□□□□ -0.65
VMP1-213ENST00000591877 CDC42BPGQ6DT37 1551 aa10.99□□□□□ -0.65
VMP1-213ENST00000591877 IRS1P35568 1242 aa10.98□□□□□ -0.65
VMP1-213ENST00000591877 PTSQ03393 145 aa10.98□□□□□ -0.65
VMP1-213ENST00000591877 WAPLQ7Z5K2 1190 aa10.98□□□□□ -0.65
VMP1-213ENST00000591877 WHAMMQ8TF30 809 aa10.98□□□□□ -0.65
VMP1-213ENST00000591877 ORAI2Q96SN7 254 aa10.98□□□□□ -0.65
VMP1-213ENST00000591877 PPP1R12CQ9BZL4 782 aa10.98□□□□□ -0.65
VMP1-213ENST00000591877 STK26Q9P289 416 aa10.98□□□□□ -0.65
VMP1-213ENST00000591877 SPATA31A6Q5VVP1 1343 aa10.98□□□□□ -0.65
VMP1-213ENST00000591877 ABCC11Q96J66 1382 aa10.98□□□□□ -0.65
VMP1-213ENST00000591877 PLEKHH1Q9ULM0 1364 aa10.98□□□□□ -0.65
VMP1-213ENST00000591877 VAC14Q08AM6 782 aa10.97□□□□□ -0.65
VMP1-213ENST00000591877 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.97□□□□□ -0.65
VMP1-213ENST00000591877 RNFT1Q5M7Z0 435 aa10.97□□□□□ -0.65
VMP1-213ENST00000591877 NPM2Q86SE8 214 aaKnown RBP10.97□□□□□ -0.65
VMP1-213ENST00000591877 C14orf93Q9H972 538 aaKnown RBP10.97□□□□□ -0.65
VMP1-213ENST00000591877 YTHDC2Q9H6S0 1430 aaKnown RBP10.97□□□□□ -0.65
VMP1-213ENST00000591877 FIGNL2A6NMB9 653 aa10.96□□□□□ -0.65
VMP1-213ENST00000591877 SRPK2P78362 688 aaKnown RBP10.96□□□□□ -0.65
VMP1-213ENST00000591877 AEBP1Q8IUX7 1158 aa10.96□□□□□ -0.65
VMP1-213ENST00000591877 RGPD8O14715 1765 aaPredicted RBP10.95□□□□□ -0.66
VMP1-213ENST00000591877 FMN2Q9NZ56 1722 aa10.95□□□□□ -0.66
VMP1-213ENST00000591877 F12P00748 615 aaPredicted RBP10.95□□□□□ -0.66
VMP1-213ENST00000591877 PNPLA6Q8IY17 1366 aa10.94□□□□□ -0.66
VMP1-213ENST00000591877 TTLL8A6PVC2 850 aa10.94□□□□□ -0.66
VMP1-213ENST00000591877 FSHRP23945 695 aa10.94□□□□□ -0.66
VMP1-213ENST00000591877 LRRC59Q96AG4 307 aaKnown RBP10.94□□□□□ -0.66
VMP1-213ENST00000591877 TSEN34Q9BSV6 310 aaKnown RBP10.94□□□□□ -0.66
VMP1-213ENST00000591877 DNMT3AQ9Y6K1 912 aaPredicted RBP10.94□□□□□ -0.66
VMP1-213ENST00000591877 ADGRB1O14514 1584 aa10.94□□□□□ -0.66
VMP1-213ENST00000591877 DHX57Q6P158 1386 aaKnown RBP10.93□□□□□ -0.66
VMP1-213ENST00000591877 CSB-PGBD3P0DP91 1061 aa10.93□□□□□ -0.66
VMP1-213ENST00000591877 BPHLQ86WA6 291 aaPredicted RBP10.93□□□□□ -0.66
VMP1-213ENST00000591877 EPS8L1Q8TE68 723 aa10.93□□□□□ -0.66
VMP1-213ENST00000591877 SIRT1Q96EB6 747 aa10.93□□□□□ -0.66
VMP1-213ENST00000591877 PALM3A6NDB9 673 aaPredicted RBP10.92□□□□□ -0.66
VMP1-213ENST00000591877 NANOS1Q8WY41 292 aaKnown RBP10.92□□□□□ -0.66
VMP1-213ENST00000591877 PXDNQ92626 1479 aa10.92□□□□□ -0.66
VMP1-213ENST00000591877 COL22A1Q8NFW1 1626 aaPredicted RBP10.91□□□□□ -0.66
VMP1-213ENST00000591877 DLC1Q96QB1 1528 aa10.91□□□□□ -0.66
VMP1-213ENST00000591877 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.91□□□□□ -0.66
VMP1-213ENST00000591877 BRD1O95696 1058 aa10.91□□□□□ -0.66
VMP1-213ENST00000591877 EIF4G2P78344 907 aaKnown RBP eCLIP10.91□□□□□ -0.665e-10■■■■■ 27.7
VMP1-213ENST00000591877 KCNA1Q09470 495 aa10.91□□□□□ -0.66
VMP1-213ENST00000591877 NR6A1Q15406 480 aa10.91□□□□□ -0.66
VMP1-213ENST00000591877 ESCO1Q5FWF5 840 aa10.91□□□□□ -0.66
VMP1-213ENST00000591877 MEX3CQ5U5Q3 659 aaKnown RBP10.91□□□□□ -0.66
VMP1-213ENST00000591877 CCDC155Q8N6L0 562 aa10.91□□□□□ -0.66
VMP1-213ENST00000591877 PER1O15534 1290 aaPredicted RBP10.9□□□□□ -0.66
VMP1-213ENST00000591877 ARHGEF15O94989 841 aa10.9□□□□□ -0.66
VMP1-213ENST00000591877 IGHA1P01876 353 aa10.9□□□□□ -0.66
VMP1-213ENST00000591877 MARSP56192 900 aaKnown RBP10.9□□□□□ -0.66
VMP1-213ENST00000591877 SEMA3FQ13275 785 aa10.9□□□□□ -0.66
VMP1-213ENST00000591877 DCAF11Q8TEB1 546 aa10.9□□□□□ -0.66
VMP1-213ENST00000591877 UCN2Q96RP3 112 aa10.9□□□□□ -0.66
VMP1-213ENST00000591877 USP32Q8NFA0 1604 aa10.89□□□□□ -0.67
VMP1-213ENST00000591877 FOXO3O43524 673 aa10.89□□□□□ -0.67
VMP1-213ENST00000591877 VASH1Q7L8A9 365 aaPredicted RBP10.89□□□□□ -0.67
VMP1-213ENST00000591877 VWA5B2Q8N398 1253 aa10.89□□□□□ -0.67
VMP1-213ENST00000591877 PRAM1Q96QH2 718 aa10.89□□□□□ -0.67
VMP1-213ENST00000591877 KIF1AQ12756 1690 aa10.89□□□□□ -0.67
VMP1-213ENST00000591877 ZC3H4Q9UPT8 1303 aaKnown RBP10.88□□□□□ -0.67
VMP1-213ENST00000591877 ADGRB2O60241 1585 aa10.88□□□□□ -0.67
VMP1-213ENST00000591877 XPCQ01831 940 aaPredicted RBP10.88□□□□□ -0.67
VMP1-213ENST00000591877 ZNF772Q68DY9 489 aaPredicted RBP10.88□□□□□ -0.67
VMP1-213ENST00000591877 MARF1Q9Y4F3 1742 aaKnown RBP10.88□□□□□ -0.67
VMP1-213ENST00000591877 AFF2P51816 1311 aa10.87□□□□□ -0.67
VMP1-213ENST00000591877 NPHP3Q7Z494 1330 aa10.87□□□□□ -0.67
VMP1-213ENST00000591877 ARHGEF28Q8N1W1 1705 aaKnown RBP10.87□□□□□ -0.67
VMP1-213ENST00000591877 CDC14CA4D256 554 aa10.87□□□□□ -0.67
VMP1-213ENST00000591877 ATG7O95352 703 aa10.87□□□□□ -0.67
VMP1-213ENST00000591877 SLURP2P0DP57 97 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms