RNA–Protein interactions for RNA: ENST00000589419.1

CCBE1-204, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 4

Gene CCBE1, Length 587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-204ENST00000589419 CDHR2Q9BYE9 1310 aa17.25■□□□□ 0.35
CCBE1-204ENST00000589419 SSFA2P28290 1259 aa17.25■□□□□ 0.35
CCBE1-204ENST00000589419 POLA2Q14181 598 aa17.25■□□□□ 0.35
CCBE1-204ENST00000589419 RABL6Q3YEC7 729 aaPredicted RBP17.25■□□□□ 0.35
CCBE1-204ENST00000589419 MYH3P11055 1940 aa17.25■□□□□ 0.35
CCBE1-204ENST00000589419 TUBGCP6Q96RT7 1819 aa17.24■□□□□ 0.35
CCBE1-204ENST00000589419 PNMA6EA0A0J9YXQ4 647 aa17.24■□□□□ 0.35
CCBE1-204ENST00000589419 PPP1R42Q7Z4L9 355 aa17.24■□□□□ 0.35
CCBE1-204ENST00000589419 PROM2Q8N271 834 aa17.24■□□□□ 0.35
CCBE1-204ENST00000589419 ZBTB38Q8NAP3 1195 aaPredicted RBP17.24■□□□□ 0.35
CCBE1-204ENST00000589419 KAZALD1Q96I82 304 aa17.24■□□□□ 0.35
CCBE1-204ENST00000589419 QSER1Q2KHR3 1735 aa17.24■□□□□ 0.35
CCBE1-204ENST00000589419 SRGAP3O43295 1099 aa17.23■□□□□ 0.35
CCBE1-204ENST00000589419 NUCB1Q02818 461 aa17.23■□□□□ 0.35
CCBE1-204ENST00000589419 PLA2G12BQ9BX93 195 aa17.23■□□□□ 0.35
CCBE1-204ENST00000589419 BICC1Q9H694 974 aaKnown RBP17.23■□□□□ 0.35
CCBE1-204ENST00000589419 PDZRN3Q9UPQ7 1066 aa17.23■□□□□ 0.35
CCBE1-204ENST00000589419 UBN2Q6ZU65 1347 aa17.22■□□□□ 0.35
CCBE1-204ENST00000589419 USP42Q9H9J4 1324 aaKnown RBP17.22■□□□□ 0.35
CCBE1-204ENST00000589419 ZPR1O75312 459 aa17.22■□□□□ 0.35
CCBE1-204ENST00000589419 TRAPPC3LQ5T215 181 aa17.22■□□□□ 0.35
CCBE1-204ENST00000589419 GPTP24298 496 aa17.21■□□□□ 0.35
CCBE1-204ENST00000589419 ARHGEF1Q92888 912 aaKnown RBP17.21■□□□□ 0.35
CCBE1-204ENST00000589419 DDX60Q8IY21 1712 aaKnown RBP17.21■□□□□ 0.35
CCBE1-204ENST00000589419 HSP90B1P14625 803 aaKnown RBP17.2■□□□□ 0.34
CCBE1-204ENST00000589419 RFC4P35249 363 aa17.2■□□□□ 0.34
CCBE1-204ENST00000589419 HSP90AB4PQ58FF6 505 aa17.2■□□□□ 0.34
CCBE1-204ENST00000589419 CHD1LQ86WJ1 897 aa17.2■□□□□ 0.34
CCBE1-204ENST00000589419 AKT1S1Q96B36 256 aa17.2■□□□□ 0.34
CCBE1-204ENST00000589419 BCL2L12Q9HB09 334 aa17.2■□□□□ 0.34
CCBE1-204ENST00000589419 NIP7Q9Y221 180 aaKnown RBP eCLIP17.2■□□□□ 0.34
CCBE1-204ENST00000589419 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.19■□□□□ 0.34
CCBE1-204ENST00000589419 RAB11FIP3O75154 756 aa17.19■□□□□ 0.34
CCBE1-204ENST00000589419 FOXO4P98177 505 aa17.19■□□□□ 0.34
CCBE1-204ENST00000589419 SF3B2Q13435 895 aaKnown RBP17.19■□□□□ 0.34
CCBE1-204ENST00000589419 EPHA10Q5JZY3 1008 aa17.19■□□□□ 0.34
CCBE1-204ENST00000589419 USPL1Q5W0Q7 1092 aa17.19■□□□□ 0.34
CCBE1-204ENST00000589419 UTP14AQ9BVJ6 771 aaKnown RBP17.19■□□□□ 0.34
CCBE1-204ENST00000589419 TRMT112Q9UI30 125 aaKnown RBP17.19■□□□□ 0.34
CCBE1-204ENST00000589419 NOP58Q9Y2X3 529 aaKnown RBP17.19■□□□□ 0.34
CCBE1-204ENST00000589419 SH3TC1Q8TE82 1336 aa17.19■□□□□ 0.34
CCBE1-204ENST00000589419 BAG6P46379 1132 aa17.18■□□□□ 0.34
CCBE1-204ENST00000589419 AMIGO3Q86WK7 504 aa17.18■□□□□ 0.34
CCBE1-204ENST00000589419 FLAD1Q8NFF5 587 aa17.18■□□□□ 0.34
CCBE1-204ENST00000589419 CAMKK2Q96RR4 588 aa17.18■□□□□ 0.34
CCBE1-204ENST00000589419 ZBTB47Q9UFB7 747 aaPredicted RBP17.18■□□□□ 0.34
CCBE1-204ENST00000589419 PHF14O94880 888 aa17.17■□□□□ 0.34
CCBE1-204ENST00000589419 NTSR2O95665 410 aa17.17■□□□□ 0.34
CCBE1-204ENST00000589419 ANKRD45Q5TZF3 282 aa17.17■□□□□ 0.34
CCBE1-204ENST00000589419 SUSD4Q5VX71 490 aa17.17■□□□□ 0.34
CCBE1-204ENST00000589419 CCDC125Q86Z20 511 aa17.17■□□□□ 0.34
CCBE1-204ENST00000589419 ERC1Q8IUD2 1116 aa17.17■□□□□ 0.34
CCBE1-204ENST00000589419 FAM89AQ96GI7 184 aa17.17■□□□□ 0.34
CCBE1-204ENST00000589419 SRP68Q9UHB9 627 aaKnown RBP17.17■□□□□ 0.34
CCBE1-204ENST00000589419 IRS4O14654 1257 aaPredicted RBP17.16■□□□□ 0.34
CCBE1-204ENST00000589419 ZNF827Q17R98 1081 aa17.16■□□□□ 0.34
CCBE1-204ENST00000589419 LMBR1LQ6UX01 489 aa17.16■□□□□ 0.34
CCBE1-204ENST00000589419 JARID2Q92833 1246 aaPredicted RBP17.16■□□□□ 0.34
CCBE1-204ENST00000589419 NYXQ9GZU5 481 aa17.16■□□□□ 0.34
CCBE1-204ENST00000589419 COPRSQ9NQ92 184 aa17.16■□□□□ 0.34
CCBE1-204ENST00000589419 EP400Q96L91 3159 aa17.16■□□□□ 0.34
CCBE1-204ENST00000589419 CARMIL3Q8ND23 1372 aa17.15■□□□□ 0.34
CCBE1-204ENST00000589419 LRP5O75197 1615 aa17.15■□□□□ 0.34
CCBE1-204ENST00000589419 PDE8AO60658 829 aa17.15■□□□□ 0.34
CCBE1-204ENST00000589419 SURF6O75683 361 aaKnown RBP17.15■□□□□ 0.34
CCBE1-204ENST00000589419 RFX5P48382 616 aaPredicted RBP17.15■□□□□ 0.34
CCBE1-204ENST00000589419 TBC1D9BQ66K14 1250 aa17.15■□□□□ 0.34
CCBE1-204ENST00000589419 SETDB2Q96T68 719 aa17.15■□□□□ 0.34
CCBE1-204ENST00000589419 LRRCC1Q9C099 1032 aa17.15■□□□□ 0.34
CCBE1-204ENST00000589419 LNPKQ9C0E8 428 aa17.15■□□□□ 0.34
CCBE1-204ENST00000589419 EXOC6BQ9Y2D4 811 aa17.15■□□□□ 0.34
CCBE1-204ENST00000589419 CASZ1Q86V15 1759 aa17.15■□□□□ 0.34
CCBE1-204ENST00000589419 RIC1Q4ADV7 1423 aa17.14■□□□□ 0.33
CCBE1-204ENST00000589419 CSF1RP07333 972 aa17.14■□□□□ 0.33
CCBE1-204ENST00000589419 RGS3P49796 1198 aa17.14■□□□□ 0.33
CCBE1-204ENST00000589419 CTSWP56202 376 aa17.14■□□□□ 0.33
CCBE1-204ENST00000589419 KIF1BPQ96EK5 621 aa17.14■□□□□ 0.33
CCBE1-204ENST00000589419 RTL9Q8NET4 1388 aa17.14■□□□□ 0.33
CCBE1-204ENST00000589419 PDE4AP27815 886 aa17.13■□□□□ 0.33
CCBE1-204ENST00000589419 EN1Q05925 392 aaPredicted RBP17.13■□□□□ 0.33
CCBE1-204ENST00000589419 RTL5Q5HYW3 569 aaPredicted RBP17.13■□□□□ 0.33
CCBE1-204ENST00000589419 SMIM5Q71RC9 77 aa17.13■□□□□ 0.33
CCBE1-204ENST00000589419 TFCP2L1Q9NZI6 479 aa17.13■□□□□ 0.33
CCBE1-204ENST00000589419 GYS1P13807 737 aa17.12■□□□□ 0.33
CCBE1-204ENST00000589419 EZH2Q15910 746 aaKnown RBP17.12■□□□□ 0.33
CCBE1-204ENST00000589419 SKAP1Q86WV1 359 aa17.12■□□□□ 0.33
CCBE1-204ENST00000589419 FBXO3Q9UK99 471 aa17.12■□□□□ 0.33
CCBE1-204ENST00000589419 PTPN12Q05209 780 aaKnown RBP17.11■□□□□ 0.33
CCBE1-204ENST00000589419 G3BP1Q13283 466 aaKnown RBP eCLIP17.11■□□□□ 0.33
CCBE1-204ENST00000589419 OS9Q13438 667 aaPredicted RBP17.11■□□□□ 0.33
CCBE1-204ENST00000589419 SLC10A5Q5PT55 438 aa17.11■□□□□ 0.33
CCBE1-204ENST00000589419 RHPN1Q8TCX5 695 aa17.11■□□□□ 0.33
CCBE1-204ENST00000589419 CHMP3Q9Y3E7 222 aa17.11■□□□□ 0.33
CCBE1-204ENST00000589419 NFIXQ14938 502 aa17.1■□□□□ 0.33
CCBE1-204ENST00000589419 NBPF5PQ86XG9 351 aaPredicted RBP17.1■□□□□ 0.33
CCBE1-204ENST00000589419 TTLL11Q8NHH1 800 aa17.1■□□□□ 0.33
CCBE1-204ENST00000589419 STK32BQ9NY57 414 aa17.1■□□□□ 0.33
CCBE1-204ENST00000589419 PA2G4Q9UQ80 394 aaKnown RBP17.1■□□□□ 0.33
CCBE1-204ENST00000589419 PNPLA7Q6ZV29 1317 aa17.1■□□□□ 0.33
CCBE1-204ENST00000589419 NRXN2Q9P2S2 1712 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms