RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 UTYO14607 1347 aa31.04■■■□□ 2.56
RFX1-205ENST00000589239 UBN2Q6ZU65 1347 aa31.04■■■□□ 2.56
RFX1-205ENST00000589239 CLEC4GQ6UXB4 293 aa31.04■■■□□ 2.56
RFX1-205ENST00000589239 NLRP10Q86W26 655 aa31.04■■■□□ 2.56
RFX1-205ENST00000589239 ANO8Q9HCE9 1232 aaPredicted RBP31.04■■■□□ 2.56
RFX1-205ENST00000589239 SCN7AQ01118 1682 aa31.03■■■□□ 2.56
RFX1-205ENST00000589239 ANKRD36CQ5JPF3 1778 aa31.02■■■□□ 2.56
RFX1-205ENST00000589239 RTL5Q5HYW3 569 aaPredicted RBP31.02■■■□□ 2.56
RFX1-205ENST00000589239 UBE3BQ7Z3V4 1068 aa31.02■■■□□ 2.56
RFX1-205ENST00000589239 NIP7Q9Y221 180 aaKnown RBP eCLIP31.01■■■□□ 2.56
RFX1-205ENST00000589239 UPF1Q92900 1129 aaKnown RBP eCLIP31■■■□□ 2.55
RFX1-205ENST00000589239 IGHDP01880 384 aa31■■■□□ 2.55
RFX1-205ENST00000589239 H7C1W4 665 aa30.99■■■□□ 2.55
RFX1-205ENST00000589239 RGL2O15211 777 aa30.99■■■□□ 2.55
RFX1-205ENST00000589239 CEP85Q6P2H3 762 aa30.99■■■□□ 2.55
RFX1-205ENST00000589239 CASP7P55210 303 aa30.98■■■□□ 2.55
RFX1-205ENST00000589239 SLC15A2Q16348 729 aa30.98■■■□□ 2.55
RFX1-205ENST00000589239 TBC1D9BQ66K14 1250 aa30.98■■■□□ 2.55
RFX1-205ENST00000589239 SIRT2Q8IXJ6 389 aa30.98■■■□□ 2.55
RFX1-205ENST00000589239 SUCLG2Q96I99 432 aa30.98■■■□□ 2.55
RFX1-205ENST00000589239 BICDL1Q6ZP65 573 aa30.98■■■□□ 2.55
RFX1-205ENST00000589239 COL23A1Q86Y22 540 aaPredicted RBP30.97■■■□□ 2.55
RFX1-205ENST00000589239 KAZALD1Q96I82 304 aa30.97■■■□□ 2.55
RFX1-205ENST00000589239 TUBGCP6Q96RT7 1819 aa30.97■■■□□ 2.55
RFX1-205ENST00000589239 FAM89AQ96GI7 184 aa30.97■■■□□ 2.55
RFX1-205ENST00000589239 STK32BQ9NY57 414 aa30.97■■■□□ 2.55
RFX1-205ENST00000589239 PNPLA7Q6ZV29 1317 aa30.96■■■□□ 2.55
RFX1-205ENST00000589239 FAM177BA6PVY3 158 aa30.96■■■□□ 2.55
RFX1-205ENST00000589239 SUSD4Q5VX71 490 aa30.96■■■□□ 2.55
RFX1-205ENST00000589239 ANKRD44Q8N8A2 993 aa30.95■■■□□ 2.55
RFX1-205ENST00000589239 ZBTB38Q8NAP3 1195 aaPredicted RBP30.95■■■□□ 2.55
RFX1-205ENST00000589239 MSH5O43196 834 aa30.95■■■□□ 2.54
RFX1-205ENST00000589239 RPAP2Q8IXW5 612 aaPredicted RBP30.95■■■□□ 2.54
RFX1-205ENST00000589239 TRMT112Q9UI30 125 aaKnown RBP30.95■■■□□ 2.54
RFX1-205ENST00000589239 GYS1P13807 737 aa30.94■■■□□ 2.54
RFX1-205ENST00000589239 PARP10Q53GL7 1025 aa30.94■■■□□ 2.54
RFX1-205ENST00000589239 PCCAP05165 728 aaPredicted RBP30.94■■■□□ 2.54
RFX1-205ENST00000589239 SYNE4Q8N205 404 aa30.94■■■□□ 2.54
RFX1-205ENST00000589239 FLAD1Q8NFF5 587 aa30.94■■■□□ 2.54
RFX1-205ENST00000589239 RWDD1Q9H446 243 aaPredicted RBP30.94■■■□□ 2.54
RFX1-205ENST00000589239 HDAC5Q9UQL6 1122 aa30.94■■■□□ 2.54
RFX1-205ENST00000589239 HDAC1Q13547 482 aaPredicted RBP30.93■■■□□ 2.54
RFX1-205ENST00000589239 BICC1Q9H694 974 aaKnown RBP30.93■■■□□ 2.54
RFX1-205ENST00000589239 EPHA10Q5JZY3 1008 aa30.92■■■□□ 2.54
RFX1-205ENST00000589239 SETDB2Q96T68 719 aa30.92■■■□□ 2.54
RFX1-205ENST00000589239 KDM2BQ8NHM5 1336 aa30.92■■■□□ 2.54
RFX1-205ENST00000589239 UTP14AQ9BVJ6 771 aaKnown RBP30.91■■■□□ 2.54
RFX1-205ENST00000589239 PNMA6EA0A0J9YXQ4 647 aa30.91■■■□□ 2.54
RFX1-205ENST00000589239 ILDR2Q71H61 639 aa30.91■■■□□ 2.54
RFX1-205ENST00000589239 PPP1R42Q7Z4L9 355 aa30.9■■■□□ 2.54
RFX1-205ENST00000589239 ATP8B2P98198 1209 aa30.89■■■□□ 2.54
RFX1-205ENST00000589239 NTSR2O95665 410 aa30.89■■■□□ 2.54
RFX1-205ENST00000589239 NFIXQ14938 502 aa30.89■■■□□ 2.54
RFX1-205ENST00000589239 SH3TC1Q8TE82 1336 aa30.87■■■□□ 2.53
RFX1-205ENST00000589239 CENPQQ7L2Z9 268 aaPredicted RBP30.87■■■□□ 2.53
RFX1-205ENST00000589239 NUTM1Q86Y26 1132 aa30.87■■■□□ 2.53
RFX1-205ENST00000589239 SRGAP3O43295 1099 aa30.86■■■□□ 2.53
RFX1-205ENST00000589239 CDHR2Q9BYE9 1310 aa30.86■■■□□ 2.53
RFX1-205ENST00000589239 IRS4O14654 1257 aaPredicted RBP30.86■■■□□ 2.53
RFX1-205ENST00000589239 FOXO4P98177 505 aa30.86■■■□□ 2.53
RFX1-205ENST00000589239 MTX1Q13505 466 aa30.85■■■□□ 2.53
RFX1-205ENST00000589239 HMMRO75330 724 aa30.85■■■□□ 2.53
RFX1-205ENST00000589239 RABL6Q3YEC7 729 aaPredicted RBP30.84■■■□□ 2.53
RFX1-205ENST00000589239 NBPF5PQ86XG9 351 aaPredicted RBP30.83■■■□□ 2.53
RFX1-205ENST00000589239 CARMIL3Q8ND23 1372 aa30.83■■■□□ 2.53
RFX1-205ENST00000589239 LMBR1LQ6UX01 489 aa30.83■■■□□ 2.53
RFX1-205ENST00000589239 SSH3Q8TE77 659 aa30.83■■■□□ 2.53
RFX1-205ENST00000589239 COL24A1Q17RW2 1714 aa30.83■■■□□ 2.53
RFX1-205ENST00000589239 PLA2G12BQ9BX93 195 aa30.82■■■□□ 2.52
RFX1-205ENST00000589239 HCLS1P14317 486 aaPredicted RBP30.82■■■□□ 2.52
RFX1-205ENST00000589239 TM4SF1P30408 202 aa30.82■■■□□ 2.52
RFX1-205ENST00000589239 POLA2Q14181 598 aa30.82■■■□□ 2.52
RFX1-205ENST00000589239 ERFEQ4G0M1 354 aa30.81■■■□□ 2.52
RFX1-205ENST00000589239 NLGN1Q8N2Q7 840 aa30.81■■■□□ 2.52
RFX1-205ENST00000589239 PDGFDQ9GZP0 370 aaPredicted RBP30.81■■■□□ 2.52
RFX1-205ENST00000589239 NYXQ9GZU5 481 aa30.8■■■□□ 2.52
RFX1-205ENST00000589239 QSER1Q2KHR3 1735 aa30.8■■■□□ 2.52
RFX1-205ENST00000589239 GTF2E1P29083 439 aaPredicted RBP30.8■■■□□ 2.52
RFX1-205ENST00000589239 CHMP3Q9Y3E7 222 aa30.8■■■□□ 2.52
RFX1-205ENST00000589239 MSL1Q68DK7 614 aa30.79■■■□□ 2.52
RFX1-205ENST00000589239 TPTE2Q6XPS3 522 aa30.79■■■□□ 2.52
RFX1-205ENST00000589239 SMC5Q8IY18 1101 aa30.79■■■□□ 2.52
RFX1-205ENST00000589239 DCTPP1Q9H773 170 aa30.79■■■□□ 2.52
RFX1-205ENST00000589239 PDE8AO60658 829 aa30.78■■■□□ 2.52
RFX1-205ENST00000589239 DDR1Q08345 913 aa30.78■■■□□ 2.52
RFX1-205ENST00000589239 CCDC85AQ96PX6 553 aaPredicted RBP30.78■■■□□ 2.52
RFX1-205ENST00000589239 CCDC24Q8N4L8 307 aa30.77■■■□□ 2.52
RFX1-205ENST00000589239 NPHP1O15259 732 aa30.76■■■□□ 2.52
RFX1-205ENST00000589239 CTSWP56202 376 aa30.76■■■□□ 2.52
RFX1-205ENST00000589239 GCC1Q96CN9 775 aa30.76■■■□□ 2.52
RFX1-205ENST00000589239 ABCC12Q96J65 1359 aa30.76■■■□□ 2.51
RFX1-205ENST00000589239 EXOC6BQ9Y2D4 811 aa30.76■■■□□ 2.51
RFX1-205ENST00000589239 POLRMTO00411 1230 aaKnown RBP30.75■■■□□ 2.51
RFX1-205ENST00000589239 SERPINB2P05120 415 aa30.75■■■□□ 2.51
RFX1-205ENST00000589239 CSF1RP07333 972 aa30.75■■■□□ 2.51
RFX1-205ENST00000589239 TTLL11Q8NHH1 800 aa30.75■■■□□ 2.51
RFX1-205ENST00000589239 CNBD1Q8NA66 436 aa30.74■■■□□ 2.51
RFX1-205ENST00000589239 KLHDC4Q8TBB5 520 aa30.74■■■□□ 2.51
RFX1-205ENST00000589239 PA2G4Q9UQ80 394 aaKnown RBP30.74■■■□□ 2.51
RFX1-205ENST00000589239 FAM161AQ3B820 660 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms