RNA–Protein interactions for RNA: ENST00000588892.1

U2AF1L4-210, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 2

Gene U2AF1L4, Length 2,582 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-210	ENST00000588892	ZDHHC9	Q9Y397	364 aa		13.63	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	IGKV5-2	P06315	115 aa		13.62	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	NUCB2	P80303	420 aa		13.62	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	DNAJC10	Q8IXB1	793 aa		13.62	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.62	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	DCTPP1	Q9H773	170 aa		13.62	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	ZKSCAN5	Q9Y2L8	839 aa		13.62	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	RABEP1	Q15276	862 aa		13.62	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	TTLL7	Q6ZT98	887 aa		13.62	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	PTF1A	Q7RTS3	328 aa		13.62	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	RIC3	Q7Z5B4	369 aa		13.62	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	PLEKHM2	Q8IWE5	1019 aa		13.62	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	EXOC6B	Q9Y2D4	811 aa		13.62	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	LAMB4	A4D0S4	1761 aa		13.62	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	PXDNL	A1KZ92	1463 aa		13.61	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	KCNQ2	O43526	872 aa		13.61	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	TERF1	P54274	439 aa		13.61	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.61	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	BCL9	O00512	1426 aa		13.61	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	UBTFL1	P0CB47	393 aa	Predicted RBP	13.61	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	HS1BP3	Q53T59	392 aa		13.61	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	USP26	Q9BXU7	913 aa		13.61	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.61	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	ATP5J2-PTCD1	G3V325	749 aa		13.6	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	MYD88	Q99836	296 aa		13.6	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	USP21	Q9UK80	565 aa		13.6	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.6	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	THRAP3	Q9Y2W1	955 aa	Known RBP	13.6	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	GNAI3	P08754	354 aa		13.59	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.59	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.59	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	ANKRD13D	Q6ZTN6	518 aa		13.59	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	TSC1	Q92574	1164 aa		13.59	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.59	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	KAZALD1	Q96I82	304 aa		13.59	□□□□□ -0.23
U2AF1L4-210	ENST00000588892	LRSAM1	Q6UWE0	723 aa		13.58	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	BARGIN	Q6ZT62	677 aa		13.58	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	ARFGEF2	Q9Y6D5	1785 aa		13.58	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	ATP8B2	P98198	1209 aa		13.58	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	VPS72	Q15906	364 aa		13.58	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	PPP1R42	Q7Z4L9	355 aa		13.58	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	ZBTB3	Q9H5J0	574 aa		13.58	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	KCNQ4	P56696	695 aa		13.57	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	TTC22	Q5TAA0	569 aa		13.57	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	CHMP4A	Q9BY43	222 aa		13.57	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.57	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	NEURL1B	A8MQ27	555 aa		13.57	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	LINS1	Q8NG48	757 aa		13.57	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	SUCLG2	Q96I99	432 aa		13.57	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	MAP7D2	Q96T17	732 aa		13.57	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.57	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	SPATA31A6	Q5VVP1	1343 aa		13.56	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	DDX58	O95786	925 aa	Known RBP	13.56	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	TPRN	Q4KMQ1	711 aa		13.56	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	MEX3C	Q5U5Q3	659 aa	Known RBP	13.56	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	METTL22	Q9BUU2	404 aa	Predicted RBP	13.56	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	SDS	P20132	328 aa		13.56	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	EPHA10	Q5JZY3	1008 aa		13.56	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	TSHZ3	Q63HK5	1081 aa		13.56	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	NOL8	Q76FK4	1167 aa	Known RBP	13.56	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	ZNF830	Q96NB3	372 aa	Predicted RBP	13.56	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	AFDN	P55196	1824 aa	Known RBP	13.55	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	FAM177B	A6PVY3	158 aa		13.55	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	DYNC1I1	O14576	645 aa		13.55	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	SRGAP3	O43295	1099 aa		13.55	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	PTMA	P06454	111 aa	Known RBP	13.55	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.55	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	AFF2	P51816	1311 aa		13.55	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	GRM8	O00222	908 aa		13.55	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	ST18	O60284	1047 aa		13.55	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.55	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	SASS6	Q6UVJ0	657 aa		13.55	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	CCDC39	Q9UFE4	941 aa		13.55	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	ALDH1L1	O75891	902 aa		13.54	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	GCKR	Q14397	625 aa		13.54	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	CSPP1	Q1MSJ5	1256 aa		13.54	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	BICC1	Q9H694	974 aa	Known RBP	13.54	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	CWC22	Q9HCG8	908 aa	Known RBP	13.54	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	PA2G4	Q9UQ80	394 aa	Known RBP	13.54	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	ZBTB1	Q9Y2K1	713 aa		13.54	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	GDPD2	Q9HCC8	539 aa		13.54	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.54	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	CYP19A1	P11511	503 aa	Predicted RBP	13.53	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.53	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	PLBD2	Q8NHP8	589 aa		13.53	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	KLHDC4	Q8TBB5	520 aa		13.53	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	SSH3	Q8TE77	659 aa		13.53	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	IL1RAPL2	Q9NP60	686 aa		13.53	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	NUP188	Q5SRE5	1749 aa		13.53	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	SMIM5	Q71RC9	77 aa		13.53	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	TJP1	Q07157	1748 aa		13.52	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	HMMR	O75330	724 aa		13.52	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	POLA2	Q14181	598 aa		13.52	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	UBE3B	Q7Z3V4	1068 aa		13.52	□□□□□ -0.24
U2AF1L4-210	ENST00000588892	SURF6	O75683	361 aa	Known RBP	13.52	□□□□□ -0.25
U2AF1L4-210	ENST00000588892	NEXN	Q0ZGT2	675 aa		13.52	□□□□□ -0.25
U2AF1L4-210	ENST00000588892	ITPK1	Q13572	414 aa		13.52	□□□□□ -0.25
U2AF1L4-210	ENST00000588892	MYH14	Q7Z406	1995 aa	Known RBP	13.51	□□□□□ -0.25
U2AF1L4-210	ENST00000588892	NEK4	P51957	841 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms