RNA–Protein interactions for RNA: ENST00000588736.1

SRP68-208, Transcript of signal recognition particle 68, human

TSL 2

Gene SRP68, Length 2,532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRP68-208	ENST00000588736	CASP7	P55210	303 aa		11.8	□□□□□ -0.52
SRP68-208	ENST00000588736	PKP1	Q13835	747 aa		11.8	□□□□□ -0.52
SRP68-208	ENST00000588736	MARCH10	Q8NA82	808 aa	Predicted RBP	11.8	□□□□□ -0.52
SRP68-208	ENST00000588736	BTAF1	O14981	1849 aa		11.79	□□□□□ -0.52
SRP68-208	ENST00000588736	ATRN	O75882	1429 aa		11.79	□□□□□ -0.52
SRP68-208	ENST00000588736	APBB1	O00213	710 aa		11.79	□□□□□ -0.52
SRP68-208	ENST00000588736	PDE1A	P54750	535 aa		11.79	□□□□□ -0.52
SRP68-208	ENST00000588736	TRIM28	Q13263	835 aa	Known RBP	11.79	□□□□□ -0.52
SRP68-208	ENST00000588736	CCDC191	Q8NCU4	936 aa		11.79	□□□□□ -0.52
SRP68-208	ENST00000588736	GBP4	Q96PP9	640 aa		11.79	□□□□□ -0.52
SRP68-208	ENST00000588736	LY75	O60449	1722 aa		11.79	□□□□□ -0.52
SRP68-208	ENST00000588736	A1BG	P04217	495 aa		11.79	□□□□□ -0.52
SRP68-208	ENST00000588736	CYP19A1	P11511	503 aa	Predicted RBP	11.79	□□□□□ -0.52
SRP68-208	ENST00000588736	DNAJC10	Q8IXB1	793 aa		11.79	□□□□□ -0.52
SRP68-208	ENST00000588736		H7C1W4	665 aa		11.78	□□□□□ -0.52
SRP68-208	ENST00000588736	SMARCA5	O60264	1052 aa	Predicted RBP	11.78	□□□□□ -0.52
SRP68-208	ENST00000588736	RHPN1	Q8TCX5	695 aa		11.78	□□□□□ -0.52
SRP68-208	ENST00000588736	SMARCC1	Q92922	1105 aa	Predicted RBP	11.78	□□□□□ -0.52
SRP68-208	ENST00000588736	ISCA1	Q9BUE6	129 aa		11.78	□□□□□ -0.52
SRP68-208	ENST00000588736	SURF6	O75683	361 aa	Known RBP	11.78	□□□□□ -0.52
SRP68-208	ENST00000588736	MX1	P20591	662 aa		11.78	□□□□□ -0.52
SRP68-208	ENST00000588736	NGLY1	Q96IV0	654 aa		11.78	□□□□□ -0.52
SRP68-208	ENST00000588736	BICC1	Q9H694	974 aa	Known RBP	11.78	□□□□□ -0.52
SRP68-208	ENST00000588736	CWC25	Q9NXE8	425 aa	Predicted RBP	11.78	□□□□□ -0.52
SRP68-208	ENST00000588736	PRIM1	P49642	420 aa	Known RBP	11.77	□□□□□ -0.53
SRP68-208	ENST00000588736	TTLL7	Q6ZT98	887 aa		11.77	□□□□□ -0.53
SRP68-208	ENST00000588736	C8orf37	Q96NL8	207 aa		11.77	□□□□□ -0.53
SRP68-208	ENST00000588736	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.77	□□□□□ -0.53
SRP68-208	ENST00000588736	SCN7A	Q01118	1682 aa		11.77	□□□□□ -0.53
SRP68-208	ENST00000588736	MAP3K15	Q6ZN16	1313 aa		11.77	□□□□□ -0.53
SRP68-208	ENST00000588736	BAG4	O95429	457 aa	Known RBP	11.77	□□□□□ -0.53
SRP68-208	ENST00000588736	HSP90AB3P	Q58FF7	597 aa		11.77	□□□□□ -0.53
SRP68-208	ENST00000588736	KIF6	Q6ZMV9	814 aa		11.77	□□□□□ -0.53
SRP68-208	ENST00000588736	TRIM44	Q96DX7	344 aa	Predicted RBP	11.77	□□□□□ -0.53
SRP68-208	ENST00000588736	SLC4A9	Q96Q91	983 aa		11.77	□□□□□ -0.53
SRP68-208	ENST00000588736	TTC41P	Q6P2S7	1318 aa		11.76	□□□□□ -0.53
SRP68-208	ENST00000588736	IL6ST	P40189	918 aa	Predicted RBP	11.76	□□□□□ -0.53
SRP68-208	ENST00000588736	COPRS	Q9NQ92	184 aa		11.76	□□□□□ -0.53
SRP68-208	ENST00000588736	ERVV-1	B6SEH8	477 aa		11.76	□□□□□ -0.53
SRP68-208	ENST00000588736	NCL	P19338	710 aa	Known RBP	11.76	□□□□□ -0.53
SRP68-208	ENST00000588736	PIP4K2A	P48426	406 aa	Predicted RBP	11.76	□□□□□ -0.53
SRP68-208	ENST00000588736	TCIRG1	Q13488	830 aa		11.76	□□□□□ -0.53
SRP68-208	ENST00000588736	MCTP1	Q6DN14	999 aa		11.76	□□□□□ -0.53
SRP68-208	ENST00000588736	CCDC9	Q9Y3X0	531 aa	Known RBP	11.76	□□□□□ -0.53
SRP68-208	ENST00000588736	DDX49	Q9Y6V7	483 aa	Known RBP	11.76	□□□□□ -0.53
SRP68-208	ENST00000588736	MYH14	Q7Z406	1995 aa	Known RBP	11.75	□□□□□ -0.53
SRP68-208	ENST00000588736	TAF1L	Q8IZX4	1826 aa		11.75	□□□□□ -0.53
SRP68-208	ENST00000588736	RGL2	O15211	777 aa		11.75	□□□□□ -0.53
SRP68-208	ENST00000588736	CASC1	Q6TDU7	716 aa		11.75	□□□□□ -0.53
SRP68-208	ENST00000588736	PLA2G12B	Q9BX93	195 aa		11.75	□□□□□ -0.53
SRP68-208	ENST00000588736	USP21	Q9UK80	565 aa		11.75	□□□□□ -0.53
SRP68-208	ENST00000588736	KAT6B	Q8WYB5	2073 aa		11.75	□□□□□ -0.53
SRP68-208	ENST00000588736	PALLD	Q8WX93	1383 aa		11.75	□□□□□ -0.53
SRP68-208	ENST00000588736		A0A087WZG4	1122 aa		11.75	□□□□□ -0.53
SRP68-208	ENST00000588736	SDS	P20132	328 aa		11.75	□□□□□ -0.53
SRP68-208	ENST00000588736	RFX5	P48382	616 aa	Predicted RBP	11.75	□□□□□ -0.53
SRP68-208	ENST00000588736	CDHR2	Q9BYE9	1310 aa		11.74	□□□□□ -0.53
SRP68-208	ENST00000588736	LRP5	O75197	1615 aa		11.74	□□□□□ -0.53
SRP68-208	ENST00000588736	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.74	□□□□□ -0.53
SRP68-208	ENST00000588736	ZGPAT	Q8N5A5	531 aa	Known RBP	11.74	□□□□□ -0.53
SRP68-208	ENST00000588736	NASP	P49321	788 aa	Predicted RBP	11.74	□□□□□ -0.53
SRP68-208	ENST00000588736	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.74	□□□□□ -0.53
SRP68-208	ENST00000588736	UBE3B	Q7Z3V4	1068 aa		11.74	□□□□□ -0.53
SRP68-208	ENST00000588736	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.74	□□□□□ -0.53
SRP68-208	ENST00000588736	RBM27	Q9P2N5	1060 aa	Known RBP	11.74	□□□□□ -0.53
SRP68-208	ENST00000588736	EPB41L2	O43491	1005 aa	Known RBP	11.73	□□□□□ -0.53
SRP68-208	ENST00000588736	ONECUT3	O60422	494 aa	Predicted RBP	11.73	□□□□□ -0.53
SRP68-208	ENST00000588736	PCCA	P05165	728 aa	Predicted RBP	11.73	□□□□□ -0.53
SRP68-208	ENST00000588736	FOXO4	P98177	505 aa		11.73	□□□□□ -0.53
SRP68-208	ENST00000588736	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.73	□□□□□ -0.53
SRP68-208	ENST00000588736	FAM98C	Q17RN3	349 aa	Known RBP	11.73	□□□□□ -0.53
SRP68-208	ENST00000588736	EPHA10	Q5JZY3	1008 aa		11.73	□□□□□ -0.53
SRP68-208	ENST00000588736	CAVIN1	Q6NZI2	390 aa	Known RBP	11.73	□□□□□ -0.53
SRP68-208	ENST00000588736	SPEF2	Q9C093	1822 aa		11.73	□□□□□ -0.53
SRP68-208	ENST00000588736	HSPA1L	P34931	641 aa		11.73	□□□□□ -0.53
SRP68-208	ENST00000588736	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.73	□□□□□ -0.53	3e-7	■□□□□ 8.1
SRP68-208	ENST00000588736	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.73	□□□□□ -0.53
SRP68-208	ENST00000588736	CLASRP	Q8N2M8	674 aa	Known RBP	11.73	□□□□□ -0.53
SRP68-208	ENST00000588736	ZBTB3	Q9H5J0	574 aa		11.73	□□□□□ -0.53
SRP68-208	ENST00000588736	CCDC87	Q9NVE4	849 aa		11.73	□□□□□ -0.53
SRP68-208	ENST00000588736	LOC102724428	A0A0B4J2F2	783 aa		11.72	□□□□□ -0.53
SRP68-208	ENST00000588736	ATP5J2-PTCD1	G3V325	749 aa		11.72	□□□□□ -0.53
SRP68-208	ENST00000588736	SIK1	P57059	783 aa		11.72	□□□□□ -0.53
SRP68-208	ENST00000588736	PI4K2B	Q8TCG2	481 aa		11.72	□□□□□ -0.53
SRP68-208	ENST00000588736	SYTL4	Q96C24	671 aa	Predicted RBP	11.72	□□□□□ -0.53
SRP68-208	ENST00000588736	GPATCH3	Q96I76	525 aa		11.72	□□□□□ -0.53
SRP68-208	ENST00000588736	FBXO3	Q9UK99	471 aa		11.72	□□□□□ -0.53
SRP68-208	ENST00000588736	COL24A1	Q17RW2	1714 aa		11.72	□□□□□ -0.53
SRP68-208	ENST00000588736	DDX60	Q8IY21	1712 aa	Known RBP	11.72	□□□□□ -0.53
SRP68-208	ENST00000588736	EIF5	P55010	431 aa	Known RBP	11.71	□□□□□ -0.53
SRP68-208	ENST00000588736	OS9	Q13438	667 aa	Predicted RBP	11.71	□□□□□ -0.53
SRP68-208	ENST00000588736	USP26	Q9BXU7	913 aa		11.71	□□□□□ -0.53
SRP68-208	ENST00000588736	ZBTB1	Q9Y2K1	713 aa		11.71	□□□□□ -0.53
SRP68-208	ENST00000588736	CNTNAP4	Q9C0A0	1308 aa		11.71	□□□□□ -0.53
SRP68-208	ENST00000588736	INTS5	Q6P9B9	1019 aa	Known RBP	11.71	□□□□□ -0.53
SRP68-208	ENST00000588736	ISY1	Q9ULR0	285 aa	Known RBP	11.71	□□□□□ -0.53
SRP68-208	ENST00000588736	ERC2	O15083	957 aa		11.7	□□□□□ -0.54
SRP68-208	ENST00000588736	GLRX3	O76003	335 aa	Known RBP	11.7	□□□□□ -0.54
SRP68-208	ENST00000588736	PTPN12	Q05209	780 aa	Known RBP	11.7	□□□□□ -0.54
SRP68-208	ENST00000588736	KLHL40	Q2TBA0	621 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms