RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 DZIP3Q86Y13 1208 aaKnown RBP20.32■□□□□ 0.84
NFIX-210ENST00000588228 ARXQ96QS3 562 aa20.32■□□□□ 0.84
NFIX-210ENST00000588228 NUTM1Q86Y26 1132 aa20.32■□□□□ 0.84
NFIX-210ENST00000588228 ZNF831Q5JPB2 1677 aa20.31■□□□□ 0.84
NFIX-210ENST00000588228 RREB1Q92766 1687 aa20.31■□□□□ 0.84
NFIX-210ENST00000588228 KAT6BQ8WYB5 2073 aa20.31■□□□□ 0.84
NFIX-210ENST00000588228 PCCAP05165 728 aaPredicted RBP20.31■□□□□ 0.84
NFIX-210ENST00000588228 HLFQ16534 295 aa20.31■□□□□ 0.84
NFIX-210ENST00000588228 C22orf23Q9BZE7 217 aa20.31■□□□□ 0.84
NFIX-210ENST00000588228 USP42Q9H9J4 1324 aaKnown RBP20.3■□□□□ 0.84
NFIX-210ENST00000588228 PTPN12Q05209 780 aaKnown RBP20.3■□□□□ 0.84
NFIX-210ENST00000588228 TSHZ3Q63HK5 1081 aa20.3■□□□□ 0.84
NFIX-210ENST00000588228 CASC1Q6TDU7 716 aa20.3■□□□□ 0.84
NFIX-210ENST00000588228 LMBR1LQ6UX01 489 aa20.3■□□□□ 0.84
NFIX-210ENST00000588228 SASH1O94885 1247 aa20.29■□□□□ 0.84
NFIX-210ENST00000588228 TTC41PQ6P2S7 1318 aa20.29■□□□□ 0.84
NFIX-210ENST00000588228 ZBTB38Q8NAP3 1195 aaPredicted RBP20.29■□□□□ 0.84
NFIX-210ENST00000588228 NHSQ6T4R5 1651 aa20.28■□□□□ 0.84
NFIX-210ENST00000588228 RTL5Q5HYW3 569 aaPredicted RBP20.28■□□□□ 0.84
NFIX-210ENST00000588228 NLRP10Q86W26 655 aa20.28■□□□□ 0.84
NFIX-210ENST00000588228 KLHDC4Q8TBB5 520 aa20.28■□□□□ 0.84
NFIX-210ENST00000588228 PLA2G12BQ9BX93 195 aa20.28■□□□□ 0.84
NFIX-210ENST00000588228 SIL1Q9H173 461 aa20.28■□□□□ 0.84
NFIX-210ENST00000588228 TBC1D2BQ9UPU7 963 aa20.28■□□□□ 0.84
NFIX-210ENST00000588228 SEPT12Q8IYM1 358 aa20.27■□□□□ 0.84
NFIX-210ENST00000588228 PI4K2BQ8TCG2 481 aa20.27■□□□□ 0.84
NFIX-210ENST00000588228 QTRT2Q9H974 415 aaKnown RBP20.27■□□□□ 0.84
NFIX-210ENST00000588228 CDHR2Q9BYE9 1310 aa20.27■□□□□ 0.84
NFIX-210ENST00000588228 IFIT2P09913 472 aaKnown RBP20.26■□□□□ 0.83
NFIX-210ENST00000588228 GPATCH3Q96I76 525 aa20.26■□□□□ 0.83
NFIX-210ENST00000588228 RBM25P49756 843 aaKnown RBP20.26■□□□□ 0.83
NFIX-210ENST00000588228 ERC2O15083 957 aa20.25■□□□□ 0.83
NFIX-210ENST00000588228 GPTP24298 496 aa20.25■□□□□ 0.83
NFIX-210ENST00000588228 PTF1AQ7RTS3 328 aa20.25■□□□□ 0.83
NFIX-210ENST00000588228 AACSQ86V21 672 aa20.25■□□□□ 0.83
NFIX-210ENST00000588228 ZNF34Q8IZ26 560 aa20.25■□□□□ 0.83
NFIX-210ENST00000588228 CHMP3Q9Y3E7 222 aa20.25■□□□□ 0.83
NFIX-210ENST00000588228 CNTNAP4Q9C0A0 1308 aa20.25■□□□□ 0.83
NFIX-210ENST00000588228 COL5A3P25940 1745 aaPredicted RBP20.24■□□□□ 0.83
NFIX-210ENST00000588228 TRIM6-TRIM34B2RNG4 842 aa20.24■□□□□ 0.83
NFIX-210ENST00000588228 GLRX3O76003 335 aaKnown RBP20.24■□□□□ 0.83
NFIX-210ENST00000588228 LINC00116Q8NCU8 138 aa20.24■□□□□ 0.83
NFIX-210ENST00000588228 FAM89AQ96GI7 184 aa20.24■□□□□ 0.83
NFIX-210ENST00000588228 ECHDC1Q9NTX5 307 aa20.24■□□□□ 0.83
NFIX-210ENST00000588228 CAMTA2O94983 1202 aa20.23■□□□□ 0.83
NFIX-210ENST00000588228 EAF2Q96CJ1 260 aaPredicted RBP20.23■□□□□ 0.83
NFIX-210ENST00000588228 ANKRD36CQ5JPF3 1778 aa20.23■□□□□ 0.83
NFIX-210ENST00000588228 FAM182BQ5T319 152 aa20.22■□□□□ 0.83
NFIX-210ENST00000588228 RILPL2Q969X0 211 aa20.22■□□□□ 0.83
NFIX-210ENST00000588228 TUBGCP6Q96RT7 1819 aa20.22■□□□□ 0.83
NFIX-210ENST00000588228 ERICH6Q7L0X2 663 aa20.22■□□□□ 0.83
NFIX-210ENST00000588228 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.22■□□□□ 0.83
NFIX-210ENST00000588228 UBN2Q6ZU65 1347 aa20.22■□□□□ 0.83
NFIX-210ENST00000588228 BTAF1O14981 1849 aa20.21■□□□□ 0.83
NFIX-210ENST00000588228 CSF1RP07333 972 aa20.21■□□□□ 0.83
NFIX-210ENST00000588228 RC3H1Q5TC82 1133 aaKnown RBP20.21■□□□□ 0.83
NFIX-210ENST00000588228 DAXXQ9UER7 740 aaPredicted RBP20.21■□□□□ 0.83
NFIX-210ENST00000588228 TRMT112Q9UI30 125 aaKnown RBP20.21■□□□□ 0.83
NFIX-210ENST00000588228 CIAO1O76071 339 aa20.2■□□□□ 0.82
NFIX-210ENST00000588228 CNTROBQ8N137 903 aa20.2■□□□□ 0.82
NFIX-210ENST00000588228 FBXO3Q9UK99 471 aa20.2■□□□□ 0.82
NFIX-210ENST00000588228 IL15P40933 162 aaPredicted RBP20.19■□□□□ 0.82
NFIX-210ENST00000588228 TFCP2Q12800 502 aa20.19■□□□□ 0.82
NFIX-210ENST00000588228 CCDC57Q2TAC2 916 aa20.19■□□□□ 0.82
NFIX-210ENST00000588228 PARP10Q53GL7 1025 aa20.19■□□□□ 0.82
NFIX-210ENST00000588228 TNNI3KQ59H18 835 aa20.19■□□□□ 0.82
NFIX-210ENST00000588228 FPGT-TNNI3KV9GXZ4 949 aa20.19■□□□□ 0.82
NFIX-210ENST00000588228 EYA2O00167 538 aa20.19■□□□□ 0.82
NFIX-210ENST00000588228 IRS4O14654 1257 aaPredicted RBP20.19■□□□□ 0.82
NFIX-210ENST00000588228 RGL2O15211 777 aa20.19■□□□□ 0.82
NFIX-210ENST00000588228 REC8O95072 547 aa20.19■□□□□ 0.82
NFIX-210ENST00000588228 CHMLP26374 656 aa20.19■□□□□ 0.82
NFIX-210ENST00000588228 NUP98P52948 1817 aa20.19■□□□□ 0.82
NFIX-210ENST00000588228 BECN1Q14457 450 aa20.19■□□□□ 0.82
NFIX-210ENST00000588228 ATG9AQ7Z3C6 839 aa20.19■□□□□ 0.82
NFIX-210ENST00000588228 MYH14Q7Z406 1995 aaKnown RBP20.19■□□□□ 0.82
NFIX-210ENST00000588228 CCDC8Q9H0W5 538 aaPredicted RBP20.19■□□□□ 0.82
NFIX-210ENST00000588228 ZNF652Q9Y2D9 606 aa20.19■□□□□ 0.82
NFIX-210ENST00000588228 AK7Q96M32 723 aa20.18■□□□□ 0.82
NFIX-210ENST00000588228 BCL11BQ9C0K0 894 aaPredicted RBP20.18■□□□□ 0.82
NFIX-210ENST00000588228 CCNL1Q9UK58 526 aaPredicted RBP20.18■□□□□ 0.82
NFIX-210ENST00000588228 CTSWP56202 376 aa20.17■□□□□ 0.82
NFIX-210ENST00000588228 CLEC4GQ6UXB4 293 aa20.17■□□□□ 0.82
NFIX-210ENST00000588228 SYNE4Q8N205 404 aa20.17■□□□□ 0.82
NFIX-210ENST00000588228 GPR108Q9NPR9 543 aa20.17■□□□□ 0.82
NFIX-210ENST00000588228 TLR7Q9NYK1 1049 aaKnown RBP20.17■□□□□ 0.82
NFIX-210ENST00000588228 PDE8AO60658 829 aa20.16■□□□□ 0.82
NFIX-210ENST00000588228 KCNQ4P56696 695 aa20.16■□□□□ 0.82
NFIX-210ENST00000588228 IFIT5Q13325 482 aaKnown RBP20.16■□□□□ 0.82
NFIX-210ENST00000588228 SUSD4Q5VX71 490 aa20.16■□□□□ 0.82
NFIX-210ENST00000588228 ESYT1Q9BSJ8 1104 aa20.16■□□□□ 0.82
NFIX-210ENST00000588228 USP26Q9BXU7 913 aa20.16■□□□□ 0.82
NFIX-210ENST00000588228 SH3TC1Q8TE82 1336 aa20.16■□□□□ 0.82
NFIX-210ENST00000588228 RPS6KA4O75676 772 aa20.16■□□□□ 0.82
NFIX-210ENST00000588228 TTLL11Q8NHH1 800 aa20.16■□□□□ 0.82
NFIX-210ENST00000588228 ZNF594Q96JF6 807 aaPredicted RBP20.16■□□□□ 0.82
NFIX-210ENST00000588228 UTP14AQ9BVJ6 771 aaKnown RBP20.16■□□□□ 0.82
NFIX-210ENST00000588228 MAP4K4O95819 1239 aaPredicted RBP20.15■□□□□ 0.82
NFIX-210ENST00000588228 FAM196AQ6ZSG2 479 aa20.15■□□□□ 0.82
NFIX-210ENST00000588228 LRRC24Q50LG9 513 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms