RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 NEURL1BA8MQ27 555 aa23.16■■□□□ 1.3
H3F3B-206ENST00000587560 ALDH1L1O75891 902 aa23.16■■□□□ 1.3
H3F3B-206ENST00000587560 FKBP8Q14318 412 aa23.16■■□□□ 1.3
H3F3B-206ENST00000587560 DNAJC5GQ8N7S2 189 aa23.16■■□□□ 1.3
H3F3B-206ENST00000587560 ZNF652Q9Y2D9 606 aa23.16■■□□□ 1.3
H3F3B-206ENST00000587560 NRXN2Q9P2S2 1712 aa23.15■■□□□ 1.3
H3F3B-206ENST00000587560 TM4SF1P30408 202 aa23.14■■□□□ 1.29
H3F3B-206ENST00000587560 MVPQ14764 893 aaKnown RBP23.14■■□□□ 1.29
H3F3B-206ENST00000587560 CWF19L2Q2TBE0 894 aaKnown RBP23.14■■□□□ 1.29
H3F3B-206ENST00000587560 TBC1D9BQ66K14 1250 aa23.14■■□□□ 1.29
H3F3B-206ENST00000587560 SLC4A10Q6U841 1118 aa23.14■■□□□ 1.29
H3F3B-206ENST00000587560 FTSJ3Q8IY81 847 aaKnown RBP23.14■■□□□ 1.29
H3F3B-206ENST00000587560 TNS4Q8IZW8 715 aa23.14■■□□□ 1.29
H3F3B-206ENST00000587560 SRCIN1Q9C0H9 1055 aa23.14■■□□□ 1.29
H3F3B-206ENST00000587560 PCDH10Q9P2E7 1040 aa23.14■■□□□ 1.29
H3F3B-206ENST00000587560 ATP5J2-PTCD1G3V325 749 aa23.13■■□□□ 1.29
H3F3B-206ENST00000587560 NEXNQ0ZGT2 675 aa23.13■■□□□ 1.29
H3F3B-206ENST00000587560 NLRP10Q86W26 655 aa23.13■■□□□ 1.29
H3F3B-206ENST00000587560 PELP1Q8IZL8 1130 aaKnown RBP23.13■■□□□ 1.29
H3F3B-206ENST00000587560 CCDC191Q8NCU4 936 aa23.13■■□□□ 1.29
H3F3B-206ENST00000587560 UTYO14607 1347 aa23.12■■□□□ 1.29
H3F3B-206ENST00000587560 GCKRQ14397 625 aa23.12■■□□□ 1.29
H3F3B-206ENST00000587560 SLC16A10Q8TF71 515 aa23.12■■□□□ 1.29
H3F3B-206ENST00000587560 GPBP1L1Q9HC44 474 aaPredicted RBP23.12■■□□□ 1.29
H3F3B-206ENST00000587560 CASP7P55210 303 aa23.11■■□□□ 1.29
H3F3B-206ENST00000587560 NFIXQ14938 502 aa23.11■■□□□ 1.29
H3F3B-206ENST00000587560 USP44Q9H0E7 712 aa23.11■■□□□ 1.29
H3F3B-206ENST00000587560 COG6Q9Y2V7 657 aa23.11■■□□□ 1.29
H3F3B-206ENST00000587560 ZBTB7BO15156 539 aaPredicted RBP23.1■■□□□ 1.29
H3F3B-206ENST00000587560 PARP10Q53GL7 1025 aa23.1■■□□□ 1.29
H3F3B-206ENST00000587560 NLGN1Q8N2Q7 840 aa23.1■■□□□ 1.29
H3F3B-206ENST00000587560 NIP7Q9Y221 180 aaKnown RBP eCLIP23.1■■□□□ 1.29
H3F3B-206ENST00000587560 LAMB2P55268 1798 aa23.09■■□□□ 1.29
H3F3B-206ENST00000587560 H7C1W4 665 aa23.09■■□□□ 1.29
H3F3B-206ENST00000587560 GPTP24298 496 aa23.09■■□□□ 1.29
H3F3B-206ENST00000587560 CWC25Q9NXE8 425 aaPredicted RBP23.09■■□□□ 1.29
H3F3B-206ENST00000587560 PCNTO95613 3336 aa23.09■■□□□ 1.29
H3F3B-206ENST00000587560 NTSR2O95665 410 aa23.08■■□□□ 1.29
H3F3B-206ENST00000587560 DDR1Q08345 913 aa23.08■■□□□ 1.29
H3F3B-206ENST00000587560 SUSD4Q5VX71 490 aa23.08■■□□□ 1.29
H3F3B-206ENST00000587560 CRBNQ96SW2 442 aa23.08■■□□□ 1.29
H3F3B-206ENST00000587560 DDX60Q8IY21 1712 aaKnown RBP23.08■■□□□ 1.28
H3F3B-206ENST00000587560 ITPRIPQ8IWB1 547 aa23.07■■□□□ 1.28
H3F3B-206ENST00000587560 DDX19BQ9UMR2 479 aa23.07■■□□□ 1.28
H3F3B-206ENST00000587560 CARMIL3Q8ND23 1372 aa23.06■■□□□ 1.28
H3F3B-206ENST00000587560 GRM8O00222 908 aa23.06■■□□□ 1.28
H3F3B-206ENST00000587560 POLRMTO00411 1230 aaKnown RBP23.06■■□□□ 1.28
H3F3B-206ENST00000587560 MSH5O43196 834 aa23.06■■□□□ 1.28
H3F3B-206ENST00000587560 PCCAP05165 728 aaPredicted RBP23.06■■□□□ 1.28
H3F3B-206ENST00000587560 SETDB2Q96T68 719 aa23.06■■□□□ 1.28
H3F3B-206ENST00000587560 MEIS3Q99687 375 aa23.06■■□□□ 1.28
H3F3B-206ENST00000587560 ZBTB40Q9NUA8 1239 aa23.06■■□□□ 1.28
H3F3B-206ENST00000587560 APLP1P51693 650 aa23.05■■□□□ 1.28
H3F3B-206ENST00000587560 ZBTB38Q8NAP3 1195 aaPredicted RBP23.05■■□□□ 1.28
H3F3B-206ENST00000587560 NBPF7P0C2Y1 421 aaPredicted RBP23.04■■□□□ 1.28
H3F3B-206ENST00000587560 CDHR2Q9BYE9 1310 aa23.04■■□□□ 1.28
H3F3B-206ENST00000587560 RIC1Q4ADV7 1423 aa23.03■■□□□ 1.28
H3F3B-206ENST00000587560 YBX3P16989 372 aaKnown RBP eCLIP23.03■■□□□ 1.28
H3F3B-206ENST00000587560 BICDL1Q6ZP65 573 aa23.03■■□□□ 1.28
H3F3B-206ENST00000587560 PPP1R42Q7Z4L9 355 aa23.03■■□□□ 1.28
H3F3B-206ENST00000587560 EXOC6Q8TAG9 804 aa23.03■■□□□ 1.28
H3F3B-206ENST00000587560 KAZALD1Q96I82 304 aa23.03■■□□□ 1.28
H3F3B-206ENST00000587560 UTP14AQ9BVJ6 771 aaKnown RBP23.03■■□□□ 1.28
H3F3B-206ENST00000587560 MYH3P11055 1940 aa23.02■■□□□ 1.28
H3F3B-206ENST00000587560 IRX6P78412 446 aaPredicted RBP23.02■■□□□ 1.28
H3F3B-206ENST00000587560 MSL1Q68DK7 614 aa23.02■■□□□ 1.28
H3F3B-206ENST00000587560 ANKRD31Q8N7Z5 1873 aa23.02■■□□□ 1.28
H3F3B-206ENST00000587560 GNAI3P08754 354 aa23.01■■□□□ 1.27
H3F3B-206ENST00000587560 MMP10P09238 476 aa23.01■■□□□ 1.27
H3F3B-206ENST00000587560 SLC10A5Q5PT55 438 aa23.01■■□□□ 1.27
H3F3B-206ENST00000587560 SYNE4Q8N205 404 aa23.01■■□□□ 1.27
H3F3B-206ENST00000587560 ZNF526Q8TF50 670 aaPredicted RBP23.01■■□□□ 1.27
H3F3B-206ENST00000587560 PLA2G12BQ9BX93 195 aa23.01■■□□□ 1.27
H3F3B-206ENST00000587560 WDR90Q96KV7 1748 aa23.01■■□□□ 1.27
H3F3B-206ENST00000587560 SERPINB2P05120 415 aa23■■□□□ 1.27
H3F3B-206ENST00000587560 UBE3BQ7Z3V4 1068 aa23■■□□□ 1.27
H3F3B-206ENST00000587560 KLHL34Q8N239 644 aa23■■□□□ 1.27
H3F3B-206ENST00000587560 NLGN2Q8NFZ4 835 aa23■■□□□ 1.27
H3F3B-206ENST00000587560 FAM89AQ96GI7 184 aa23■■□□□ 1.27
H3F3B-206ENST00000587560 C9orf78Q9NZ63 289 aaPredicted RBP23■■□□□ 1.27
H3F3B-206ENST00000587560 TRMT112Q9UI30 125 aaKnown RBP23■■□□□ 1.27
H3F3B-206ENST00000587560 SH3TC1Q8TE82 1336 aa23■■□□□ 1.27
H3F3B-206ENST00000587560 KIF13BQ9NQT8 1826 aa22.99■■□□□ 1.27
H3F3B-206ENST00000587560 AAMPQ13685 434 aa22.99■■□□□ 1.27
H3F3B-206ENST00000587560 JARID2Q92833 1246 aaPredicted RBP22.99■■□□□ 1.27
H3F3B-206ENST00000587560 NYXQ9GZU5 481 aa22.99■■□□□ 1.27
H3F3B-206ENST00000587560 TNRC6CQ9HCJ0 1690 aaKnown RBP22.99■■□□□ 1.27
H3F3B-206ENST00000587560 ABCC12Q96J65 1359 aa22.99■■□□□ 1.27
H3F3B-206ENST00000587560 GRIN3BO60391 1043 aa22.98■■□□□ 1.27
H3F3B-206ENST00000587560 PRR5LQ6MZQ0 368 aa22.98■■□□□ 1.27
H3F3B-206ENST00000587560 TPTE2Q6XPS3 522 aa22.98■■□□□ 1.27
H3F3B-206ENST00000587560 NBPF5PQ86XG9 351 aaPredicted RBP22.98■■□□□ 1.27
H3F3B-206ENST00000587560 SUCLG2Q96I99 432 aa22.98■■□□□ 1.27
H3F3B-206ENST00000587560 CHMP4BQ9H444 224 aaKnown RBP22.98■■□□□ 1.27
H3F3B-206ENST00000587560 UBTFL1P0CB47 393 aaPredicted RBP22.97■■□□□ 1.27
H3F3B-206ENST00000587560 ERFEQ4G0M1 354 aa22.97■■□□□ 1.27
H3F3B-206ENST00000587560 NUTM1Q86Y26 1132 aa22.97■■□□□ 1.27
H3F3B-206ENST00000587560 FOXO4P98177 505 aa22.96■■□□□ 1.27
H3F3B-206ENST00000587560 RABL6Q3YEC7 729 aaPredicted RBP22.96■■□□□ 1.27
H3F3B-206ENST00000587560 EPHA10Q5JZY3 1008 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms