RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 MFAP1P55081 439 aaKnown RBP24.41■■□□□ 1.5
TRIM47-204ENST00000587339 TBC1D9Q6ZT07 1266 aa24.41■■□□□ 1.5
TRIM47-204ENST00000587339 NUTM1Q86Y26 1132 aa24.41■■□□□ 1.5
TRIM47-204ENST00000587339 CLASRPQ8N2M8 674 aaKnown RBP24.41■■□□□ 1.5
TRIM47-204ENST00000587339 ZNF831Q5JPB2 1677 aa24.41■■□□□ 1.5
TRIM47-204ENST00000587339 NHSQ6T4R5 1651 aa24.41■■□□□ 1.5
TRIM47-204ENST00000587339 SDSP20132 328 aa24.41■■□□□ 1.5
TRIM47-204ENST00000587339 TSHZ3Q63HK5 1081 aa24.41■■□□□ 1.5
TRIM47-204ENST00000587339 KLHDC4Q8TBB5 520 aa24.41■■□□□ 1.5
TRIM47-204ENST00000587339 SIL1Q9H173 461 aa24.41■■□□□ 1.5
TRIM47-204ENST00000587339 COPRSQ9NQ92 184 aa24.41■■□□□ 1.5
TRIM47-204ENST00000587339 RREB1Q92766 1687 aa24.4■■□□□ 1.5
TRIM47-204ENST00000587339 PCCAP05165 728 aaPredicted RBP24.39■■□□□ 1.5
TRIM47-204ENST00000587339 GPTP24298 496 aa24.39■■□□□ 1.5
TRIM47-204ENST00000587339 RFX5P48382 616 aaPredicted RBP24.39■■□□□ 1.5
TRIM47-204ENST00000587339 ZBTB38Q8NAP3 1195 aaPredicted RBP24.39■■□□□ 1.5
TRIM47-204ENST00000587339 AOX1Q06278 1338 aa24.39■■□□□ 1.5
TRIM47-204ENST00000587339 NLRP10Q86W26 655 aa24.39■■□□□ 1.49
TRIM47-204ENST00000587339 CHMP3Q9Y3E7 222 aa24.39■■□□□ 1.49
TRIM47-204ENST00000587339 PTPN12Q05209 780 aaKnown RBP24.38■■□□□ 1.49
TRIM47-204ENST00000587339 TBC1D32Q96NH3 1257 aa24.38■■□□□ 1.49
TRIM47-204ENST00000587339 BTAF1O14981 1849 aa24.38■■□□□ 1.49
TRIM47-204ENST00000587339 COL5A3P25940 1745 aaPredicted RBP24.37■■□□□ 1.49
TRIM47-204ENST00000587339 SASH1O94885 1247 aa24.37■■□□□ 1.49
TRIM47-204ENST00000587339 FAM89AQ96GI7 184 aa24.37■■□□□ 1.49
TRIM47-204ENST00000587339 DDRGK1Q96HY6 314 aa24.37■■□□□ 1.49
TRIM47-204ENST00000587339 LINC00116Q8NCU8 138 aa24.37■■□□□ 1.49
TRIM47-204ENST00000587339 MYH14Q7Z406 1995 aaKnown RBP24.36■■□□□ 1.49
TRIM47-204ENST00000587339 ANKRD36CQ5JPF3 1778 aa24.35■■□□□ 1.49
TRIM47-204ENST00000587339 KCNQ4P56696 695 aa24.35■■□□□ 1.49
TRIM47-204ENST00000587339 CASC1Q6TDU7 716 aa24.35■■□□□ 1.49
TRIM47-204ENST00000587339 MSH5O43196 834 aa24.35■■□□□ 1.49
TRIM47-204ENST00000587339 NUP98P52948 1817 aa24.34■■□□□ 1.49
TRIM47-204ENST00000587339 IFIT2P09913 472 aaKnown RBP24.34■■□□□ 1.49
TRIM47-204ENST00000587339 ZNF34Q8IZ26 560 aa24.34■■□□□ 1.49
TRIM47-204ENST00000587339 C22orf23Q9BZE7 217 aa24.34■■□□□ 1.49
TRIM47-204ENST00000587339 EIF5BO60841 1220 aaKnown RBP24.33■■□□□ 1.49
TRIM47-204ENST00000587339 AACSQ86V21 672 aa24.33■■□□□ 1.49
TRIM47-204ENST00000587339 PLA2G12BQ9BX93 195 aa24.33■■□□□ 1.49
TRIM47-204ENST00000587339 CNTNAP4Q9C0A0 1308 aa24.33■■□□□ 1.49
TRIM47-204ENST00000587339 CAMTA2O94983 1202 aa24.33■■□□□ 1.49
TRIM47-204ENST00000587339 TRMT112Q9UI30 125 aaKnown RBP24.33■■□□□ 1.49
TRIM47-204ENST00000587339 TTC41PQ6P2S7 1318 aa24.33■■□□□ 1.48
TRIM47-204ENST00000587339 CDHR2Q9BYE9 1310 aa24.33■■□□□ 1.48
TRIM47-204ENST00000587339 TRIM6-TRIM34B2RNG4 842 aa24.32■■□□□ 1.48
TRIM47-204ENST00000587339 PI4K2BQ8TCG2 481 aa24.32■■□□□ 1.48
TRIM47-204ENST00000587339 GPATCH3Q96I76 525 aa24.32■■□□□ 1.48
TRIM47-204ENST00000587339 USP42Q9H9J4 1324 aaKnown RBP24.32■■□□□ 1.48
TRIM47-204ENST00000587339 CCNL1Q9UK58 526 aaPredicted RBP24.32■■□□□ 1.48
TRIM47-204ENST00000587339 UBN2Q6ZU65 1347 aa24.31■■□□□ 1.48
TRIM47-204ENST00000587339 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.31■■□□□ 1.48
TRIM47-204ENST00000587339 EAF2Q96CJ1 260 aaPredicted RBP24.31■■□□□ 1.48
TRIM47-204ENST00000587339 SBF2Q86WG5 1849 aa24.31■■□□□ 1.48
TRIM47-204ENST00000587339 ZNF772Q68DY9 489 aaPredicted RBP24.3■■□□□ 1.48
TRIM47-204ENST00000587339 RILPL2Q969X0 211 aa24.3■■□□□ 1.48
TRIM47-204ENST00000587339 BCL11BQ9C0K0 894 aaPredicted RBP24.3■■□□□ 1.48
TRIM47-204ENST00000587339 ECHDC1Q9NTX5 307 aa24.3■■□□□ 1.48
TRIM47-204ENST00000587339 ERC2O15083 957 aa24.29■■□□□ 1.48
TRIM47-204ENST00000587339 CCDC57Q2TAC2 916 aa24.29■■□□□ 1.48
TRIM47-204ENST00000587339 RC3H1Q5TC82 1133 aaKnown RBP24.29■■□□□ 1.48
TRIM47-204ENST00000587339 KRT27Q7Z3Y8 459 aa24.29■■□□□ 1.48
TRIM47-204ENST00000587339 SYNE4Q8N205 404 aa24.29■■□□□ 1.48
TRIM47-204ENST00000587339 GLRX3O76003 335 aaKnown RBP24.29■■□□□ 1.48
TRIM47-204ENST00000587339 ZNF652Q9Y2D9 606 aa24.29■■□□□ 1.48
TRIM47-204ENST00000587339 IRS4O14654 1257 aaPredicted RBP24.28■■□□□ 1.48
TRIM47-204ENST00000587339 CSF1RP07333 972 aa24.28■■□□□ 1.48
TRIM47-204ENST00000587339 FAM196AQ6ZSG2 479 aa24.28■■□□□ 1.48
TRIM47-204ENST00000587339 TUBGCP6Q96RT7 1819 aa24.28■■□□□ 1.48
TRIM47-204ENST00000587339 TFCP2Q12800 502 aa24.27■■□□□ 1.48
TRIM47-204ENST00000587339 CCDC8Q9H0W5 538 aaPredicted RBP24.27■■□□□ 1.48
TRIM47-204ENST00000587339 PARP10Q53GL7 1025 aa24.27■■□□□ 1.48
TRIM47-204ENST00000587339 RBM6P78332 1123 aaKnown RBP24.26■■□□□ 1.47
TRIM47-204ENST00000587339 CLEC4GQ6UXB4 293 aa24.26■■□□□ 1.47
TRIM47-204ENST00000587339 RBM25P49756 843 aaKnown RBP24.25■■□□□ 1.47
TRIM47-204ENST00000587339 SUSD4Q5VX71 490 aa24.25■■□□□ 1.47
TRIM47-204ENST00000587339 NIP7Q9Y221 180 aaKnown RBP eCLIP24.25■■□□□ 1.47
TRIM47-204ENST00000587339 LY75O60449 1722 aa24.25■■□□□ 1.47
TRIM47-204ENST00000587339 EYA2O00167 538 aa24.25■■□□□ 1.47
TRIM47-204ENST00000587339 RPS6KA4O75676 772 aa24.25■■□□□ 1.47
TRIM47-204ENST00000587339 IL15P40933 162 aaPredicted RBP24.25■■□□□ 1.47
TRIM47-204ENST00000587339 CTSWP56202 376 aa24.25■■□□□ 1.47
TRIM47-204ENST00000587339 IFIT5Q13325 482 aaKnown RBP24.25■■□□□ 1.47
TRIM47-204ENST00000587339 TNNI3KQ59H18 835 aa24.25■■□□□ 1.47
TRIM47-204ENST00000587339 ATG9AQ7Z3C6 839 aa24.25■■□□□ 1.47
TRIM47-204ENST00000587339 ZNF594Q96JF6 807 aaPredicted RBP24.25■■□□□ 1.47
TRIM47-204ENST00000587339 CCDC85AQ96PX6 553 aaPredicted RBP24.25■■□□□ 1.47
TRIM47-204ENST00000587339 FPGT-TNNI3KV9GXZ4 949 aa24.25■■□□□ 1.47
TRIM47-204ENST00000587339 GNPATO15228 680 aa24.24■■□□□ 1.47
TRIM47-204ENST00000587339 PDE8AO60658 829 aa24.24■■□□□ 1.47
TRIM47-204ENST00000587339 CIAO1O76071 339 aa24.24■■□□□ 1.47
TRIM47-204ENST00000587339 CNTROBQ8N137 903 aa24.24■■□□□ 1.47
TRIM47-204ENST00000587339 TTLL11Q8NHH1 800 aa24.24■■□□□ 1.47
TRIM47-204ENST00000587339 UTP14AQ9BVJ6 771 aaKnown RBP24.24■■□□□ 1.47
TRIM47-204ENST00000587339 TLR7Q9NYK1 1049 aaKnown RBP24.24■■□□□ 1.47
TRIM47-204ENST00000587339 SH3TC1Q8TE82 1336 aa24.24■■□□□ 1.47
TRIM47-204ENST00000587339 MAP4K4O95819 1239 aaPredicted RBP24.23■■□□□ 1.47
TRIM47-204ENST00000587339 AK7Q96M32 723 aa24.23■■□□□ 1.47
TRIM47-204ENST00000587339 DAXXQ9UER7 740 aaPredicted RBP24.23■■□□□ 1.47
TRIM47-204ENST00000587339 BRWD3Q6RI45 1802 aa24.22■■□□□ 1.47
TRIM47-204ENST00000587339 FAM177BA6PVY3 158 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 182.4 ms