RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 CLEC4GQ6UXB4 293 aa18.79■□□□□ 0.6
NFIX-208ENST00000587260 FAM177BA6PVY3 158 aa18.79■□□□□ 0.6
NFIX-208ENST00000587260 ALDH1L1O75891 902 aa18.79■□□□□ 0.6
NFIX-208ENST00000587260 ZNF34Q8IZ26 560 aa18.79■□□□□ 0.6
NFIX-208ENST00000587260 CWC25Q9NXE8 425 aaPredicted RBP18.79■□□□□ 0.6
NFIX-208ENST00000587260 RGL2O15211 777 aa18.78■□□□□ 0.6
NFIX-208ENST00000587260 GCKRQ14397 625 aa18.78■□□□□ 0.6
NFIX-208ENST00000587260 NLRP10Q86W26 655 aa18.78■□□□□ 0.6
NFIX-208ENST00000587260 LAMB2P55268 1798 aa18.77■□□□□ 0.6
NFIX-208ENST00000587260 NFIXQ14938 502 aa18.77■□□□□ 0.6
NFIX-208ENST00000587260 MEIS3Q99687 375 aa18.77■□□□□ 0.6
NFIX-208ENST00000587260 RTL5Q5HYW3 569 aaPredicted RBP18.76■□□□□ 0.59
NFIX-208ENST00000587260 CCDC191Q8NCU4 936 aa18.76■□□□□ 0.59
NFIX-208ENST00000587260 CARMIL3Q8ND23 1372 aa18.76■□□□□ 0.59
NFIX-208ENST00000587260 JARID2Q92833 1246 aaPredicted RBP18.76■□□□□ 0.59
NFIX-208ENST00000587260 SETDB2Q96T68 719 aa18.76■□□□□ 0.59
NFIX-208ENST00000587260 DDX60Q8IY21 1712 aaKnown RBP18.76■□□□□ 0.59
NFIX-208ENST00000587260 SUSD4Q5VX71 490 aa18.75■□□□□ 0.59
NFIX-208ENST00000587260 CCDC136Q96JN2 1154 aa18.75■□□□□ 0.59
NFIX-208ENST00000587260 C9orf78Q9NZ63 289 aaPredicted RBP18.75■□□□□ 0.59
NFIX-208ENST00000587260 GRM8O00222 908 aa18.74■□□□□ 0.59
NFIX-208ENST00000587260 TRIM28Q13263 835 aaKnown RBP18.74■□□□□ 0.59
NFIX-208ENST00000587260 PARP10Q53GL7 1025 aa18.74■□□□□ 0.59
NFIX-208ENST00000587260 USP44Q9H0E7 712 aa18.74■□□□□ 0.59
NFIX-208ENST00000587260 GNAI3P08754 354 aa18.74■□□□□ 0.59
NFIX-208ENST00000587260 NBPF7P0C2Y1 421 aaPredicted RBP18.74■□□□□ 0.59
NFIX-208ENST00000587260 DDR1Q08345 913 aa18.74■□□□□ 0.59
NFIX-208ENST00000587260 UBE3BQ7Z3V4 1068 aa18.74■□□□□ 0.59
NFIX-208ENST00000587260 NLGN1Q8N2Q7 840 aa18.74■□□□□ 0.59
NFIX-208ENST00000587260 C1orf115Q9H7X2 142 aa18.74■□□□□ 0.59
NFIX-208ENST00000587260 NRXN2Q9P2S2 1712 aa18.73■□□□□ 0.59
NFIX-208ENST00000587260 MYH3P11055 1940 aa18.73■□□□□ 0.59
NFIX-208ENST00000587260 ZBTB7AO95365 584 aa18.73■□□□□ 0.59
NFIX-208ENST00000587260 NTSR2O95665 410 aa18.73■□□□□ 0.59
NFIX-208ENST00000587260 FAM89AQ96GI7 184 aa18.73■□□□□ 0.59
NFIX-208ENST00000587260 TRMT112Q9UI30 125 aaKnown RBP18.73■□□□□ 0.59
NFIX-208ENST00000587260 PCDHB15Q9Y5E8 787 aa18.73■□□□□ 0.59
NFIX-208ENST00000587260 TNRC6CQ9HCJ0 1690 aaKnown RBP18.72■□□□□ 0.59
NFIX-208ENST00000587260 UTYO14607 1347 aa18.72■□□□□ 0.59
NFIX-208ENST00000587260 MMP10P09238 476 aa18.72■□□□□ 0.59
NFIX-208ENST00000587260 UBTFL1P0CB47 393 aaPredicted RBP18.72■□□□□ 0.59
NFIX-208ENST00000587260 B4GALNT3Q6L9W6 998 aa18.72■□□□□ 0.59
NFIX-208ENST00000587260 PPP1R42Q7Z4L9 355 aa18.72■□□□□ 0.59
NFIX-208ENST00000587260 NBPF5PQ86XG9 351 aaPredicted RBP18.72■□□□□ 0.59
NFIX-208ENST00000587260 NUTM1Q86Y26 1132 aa18.72■□□□□ 0.59
NFIX-208ENST00000587260 UTP14AQ9BVJ6 771 aaKnown RBP18.72■□□□□ 0.59
NFIX-208ENST00000587260 SRCAPQ6ZRS2 3230 aa18.72■□□□□ 0.59
NFIX-208ENST00000587260 TM4SF1P30408 202 aa18.71■□□□□ 0.59
NFIX-208ENST00000587260 SYNE4Q8N205 404 aa18.71■□□□□ 0.59
NFIX-208ENST00000587260 ZBTB38Q8NAP3 1195 aaPredicted RBP18.71■□□□□ 0.59
NFIX-208ENST00000587260 ABCC12Q96J65 1359 aa18.71■□□□□ 0.59
NFIX-208ENST00000587260 POLRMTO00411 1230 aaKnown RBP18.7■□□□□ 0.58
NFIX-208ENST00000587260 NPHP1O15259 732 aa18.7■□□□□ 0.58
NFIX-208ENST00000587260 PCCAP05165 728 aaPredicted RBP18.7■□□□□ 0.58
NFIX-208ENST00000587260 CCDC24Q8N4L8 307 aa18.7■□□□□ 0.58
NFIX-208ENST00000587260 SLC16A10Q8TF71 515 aa18.7■□□□□ 0.58
NFIX-208ENST00000587260 SH3TC1Q8TE82 1336 aa18.7■□□□□ 0.58
NFIX-208ENST00000587260 H7C1W4 665 aa18.69■□□□□ 0.58
NFIX-208ENST00000587260 GTF2E1P29083 439 aaPredicted RBP18.69■□□□□ 0.58
NFIX-208ENST00000587260 CASP7P55210 303 aa18.69■□□□□ 0.58
NFIX-208ENST00000587260 SUCLG2Q96I99 432 aa18.69■□□□□ 0.58
NFIX-208ENST00000587260 LRRFIP2Q9Y608 721 aaKnown RBP18.69■□□□□ 0.58
NFIX-208ENST00000587260 ANKRD31Q8N7Z5 1873 aa18.69■□□□□ 0.58
NFIX-208ENST00000587260 GNAI2P04899 355 aa18.69■□□□□ 0.58
NFIX-208ENST00000587260 SERPINB2P05120 415 aa18.69■□□□□ 0.58
NFIX-208ENST00000587260 HDAC1Q13547 482 aaPredicted RBP18.69■□□□□ 0.58
NFIX-208ENST00000587260 ERFEQ4G0M1 354 aa18.69■□□□□ 0.58
NFIX-208ENST00000587260 CNBD1Q8NA66 436 aa18.69■□□□□ 0.58
NFIX-208ENST00000587260 NYXQ9GZU5 481 aa18.69■□□□□ 0.58
NFIX-208ENST00000587260 HDAC5Q9UQL6 1122 aa18.69■□□□□ 0.58
NFIX-208ENST00000587260 RPAP2Q8IXW5 612 aaPredicted RBP18.68■□□□□ 0.58
NFIX-208ENST00000587260 ATF5Q9Y2D1 282 aaPredicted RBP18.68■□□□□ 0.58
NFIX-208ENST00000587260 PARP3Q9Y6F1 533 aa18.68■□□□□ 0.58
NFIX-208ENST00000587260 KDM2BQ8NHM5 1336 aa18.67■□□□□ 0.58
NFIX-208ENST00000587260 CDHR2Q9BYE9 1310 aa18.67■□□□□ 0.58
NFIX-208ENST00000587260 PRR5LQ6MZQ0 368 aa18.67■□□□□ 0.58
NFIX-208ENST00000587260 TPTE2Q6XPS3 522 aa18.67■□□□□ 0.58
NFIX-208ENST00000587260 MTFR1LQ9H019 292 aa18.67■□□□□ 0.58
NFIX-208ENST00000587260 RWDD1Q9H446 243 aaPredicted RBP18.67■□□□□ 0.58
NFIX-208ENST00000587260 IRS4O14654 1257 aaPredicted RBP18.66■□□□□ 0.58
NFIX-208ENST00000587260 HCLS1P14317 486 aaPredicted RBP18.66■□□□□ 0.58
NFIX-208ENST00000587260 KAZALD1Q96I82 304 aa18.66■□□□□ 0.58
NFIX-208ENST00000587260 IGHDP01880 384 aa18.65■□□□□ 0.58
NFIX-208ENST00000587260 EPHA10Q5JZY3 1008 aa18.65■□□□□ 0.58
NFIX-208ENST00000587260 CENPQQ7L2Z9 268 aaPredicted RBP18.65■□□□□ 0.58
NFIX-208ENST00000587260 ANKRD44Q8N8A2 993 aa18.65■□□□□ 0.58
NFIX-208ENST00000587260 BICC1Q9H694 974 aaKnown RBP18.65■□□□□ 0.58
NFIX-208ENST00000587260 ST5P78524 1137 aa18.64■□□□□ 0.58
NFIX-208ENST00000587260 CEP85Q6P2H3 762 aa18.64■□□□□ 0.58
NFIX-208ENST00000587260 SIRT2Q8IXJ6 389 aa18.64■□□□□ 0.58
NFIX-208ENST00000587260 COL11A2P13942 1736 aaPredicted RBP18.64■□□□□ 0.58
NFIX-208ENST00000587260 SPEF2Q9C093 1822 aa18.64■□□□□ 0.57
NFIX-208ENST00000587260 CCDC85AQ96PX6 553 aaPredicted RBP18.64■□□□□ 0.57
NFIX-208ENST00000587260 POLD1P28340 1107 aa18.62■□□□□ 0.57
NFIX-208ENST00000587260 FOXO4P98177 505 aa18.62■□□□□ 0.57
NFIX-208ENST00000587260 ATP8B2P98198 1209 aa18.62■□□□□ 0.57
NFIX-208ENST00000587260 MTX1Q13505 466 aa18.62■□□□□ 0.57
NFIX-208ENST00000587260 C3orf67Q6ZVT6 689 aa18.62■□□□□ 0.57
NFIX-208ENST00000587260 CHMP3Q9Y3E7 222 aa18.62■□□□□ 0.57
NFIX-208ENST00000587260 PDE8AO60658 829 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms