RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 SUCLG2Q96I99 432 aa10.6□□□□□ -0.71
NPC1-204ENST00000586718 PHF14O94880 888 aa10.59□□□□□ -0.71
NPC1-204ENST00000586718 PCCAP05165 728 aaPredicted RBP10.59□□□□□ -0.71
NPC1-204ENST00000586718 RFC4P35249 363 aa10.59□□□□□ -0.71
NPC1-204ENST00000586718 BAG6P46379 1132 aa10.59□□□□□ -0.71
NPC1-204ENST00000586718 HLFQ16534 295 aa10.59□□□□□ -0.71
NPC1-204ENST00000586718 TRAPPC3LQ5T215 181 aa10.59□□□□□ -0.71
NPC1-204ENST00000586718 PPP1R42Q7Z4L9 355 aa10.59□□□□□ -0.71
NPC1-204ENST00000586718 NLRP10Q86W26 655 aa10.59□□□□□ -0.71
NPC1-204ENST00000586718 SIRT2Q8IXJ6 389 aa10.59□□□□□ -0.71
NPC1-204ENST00000586718 BICC1Q9H694 974 aaKnown RBP10.59□□□□□ -0.71
NPC1-204ENST00000586718 NARFQ9UHQ1 456 aa10.59□□□□□ -0.71
NPC1-204ENST00000586718 NIP7Q9Y221 180 aaKnown RBP eCLIP10.59□□□□□ -0.71
NPC1-204ENST00000586718 CDHR2Q9BYE9 1310 aa10.58□□□□□ -0.71
NPC1-204ENST00000586718 USP42Q9H9J4 1324 aaKnown RBP10.58□□□□□ -0.71
NPC1-204ENST00000586718 DDX60Q8IY21 1712 aaKnown RBP10.58□□□□□ -0.72
NPC1-204ENST00000586718 CASZ1Q86V15 1759 aa10.58□□□□□ -0.72
NPC1-204ENST00000586718 H7C1W4 665 aa10.58□□□□□ -0.72
NPC1-204ENST00000586718 OS9Q13438 667 aaPredicted RBP10.58□□□□□ -0.72
NPC1-204ENST00000586718 ERC1Q8IUD2 1116 aa10.58□□□□□ -0.72
NPC1-204ENST00000586718 ZBTB38Q8NAP3 1195 aaPredicted RBP10.58□□□□□ -0.72
NPC1-204ENST00000586718 SSH3Q8TE77 659 aa10.58□□□□□ -0.72
NPC1-204ENST00000586718 DCTPP1Q9H773 170 aa10.58□□□□□ -0.72
NPC1-204ENST00000586718 LRRC4BQ9NT99 713 aa10.58□□□□□ -0.72
NPC1-204ENST00000586718 TRMT112Q9UI30 125 aaKnown RBP10.58□□□□□ -0.72
NPC1-204ENST00000586718 PDZRN3Q9UPQ7 1066 aa10.58□□□□□ -0.72
NPC1-204ENST00000586718 CHMP3Q9Y3E7 222 aa10.58□□□□□ -0.72
NPC1-204ENST00000586718 CARMIL3Q8ND23 1372 aa10.57□□□□□ -0.72
NPC1-204ENST00000586718 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.57□□□□□ -0.72
NPC1-204ENST00000586718 PNMA6EA0A0J9YXQ4 647 aa10.57□□□□□ -0.72
NPC1-204ENST00000586718 RGS3P49796 1198 aa10.57□□□□□ -0.72
NPC1-204ENST00000586718 CASP7P55210 303 aa10.57□□□□□ -0.72
NPC1-204ENST00000586718 NUCB1Q02818 461 aa10.57□□□□□ -0.72
NPC1-204ENST00000586718 POLA2Q14181 598 aa10.57□□□□□ -0.72
NPC1-204ENST00000586718 ANKRD45Q5TZF3 282 aa10.57□□□□□ -0.72
NPC1-204ENST00000586718 USPL1Q5W0Q7 1092 aa10.57□□□□□ -0.72
NPC1-204ENST00000586718 CHD1LQ86WJ1 897 aa10.57□□□□□ -0.72
NPC1-204ENST00000586718 ZNF34Q8IZ26 560 aa10.57□□□□□ -0.72
NPC1-204ENST00000586718 FLAD1Q8NFF5 587 aa10.57□□□□□ -0.72
NPC1-204ENST00000586718 UTP14AQ9BVJ6 771 aaKnown RBP10.57□□□□□ -0.72
NPC1-204ENST00000586718 NYXQ9GZU5 481 aa10.57□□□□□ -0.72
NPC1-204ENST00000586718 UBN2Q6ZU65 1347 aa10.57□□□□□ -0.72
NPC1-204ENST00000586718 SH3TC1Q8TE82 1336 aa10.57□□□□□ -0.72
NPC1-204ENST00000586718 RAB11FIP3O75154 756 aa10.56□□□□□ -0.72
NPC1-204ENST00000586718 SURF6O75683 361 aaKnown RBP10.56□□□□□ -0.72
NPC1-204ENST00000586718 RABL6Q3YEC7 729 aaPredicted RBP10.56□□□□□ -0.72
NPC1-204ENST00000586718 RTL5Q5HYW3 569 aaPredicted RBP10.56□□□□□ -0.72
NPC1-204ENST00000586718 LRRCC1Q9C099 1032 aa10.56□□□□□ -0.72
NPC1-204ENST00000586718 EXOC6BQ9Y2D4 811 aa10.56□□□□□ -0.72
NPC1-204ENST00000586718 LRP5O75197 1615 aa10.55□□□□□ -0.72
NPC1-204ENST00000586718 APBB1O00213 710 aa10.55□□□□□ -0.72
NPC1-204ENST00000586718 IRS4O14654 1257 aaPredicted RBP10.55□□□□□ -0.72
NPC1-204ENST00000586718 NPHP1O15259 732 aa10.55□□□□□ -0.72
NPC1-204ENST00000586718 TAF7LQ5H9L4 462 aa10.55□□□□□ -0.72
NPC1-204ENST00000586718 ARHGEF1Q92888 912 aaKnown RBP10.55□□□□□ -0.72
NPC1-204ENST00000586718 KIF1BPQ96EK5 621 aa10.55□□□□□ -0.72
NPC1-204ENST00000586718 FAM89AQ96GI7 184 aa10.55□□□□□ -0.72
NPC1-204ENST00000586718 SETDB2Q96T68 719 aa10.55□□□□□ -0.72
NPC1-204ENST00000586718 PLA2G12BQ9BX93 195 aa10.55□□□□□ -0.72
NPC1-204ENST00000586718 LNPKQ9C0E8 428 aa10.55□□□□□ -0.72
NPC1-204ENST00000586718 STK32BQ9NY57 414 aa10.55□□□□□ -0.72
NPC1-204ENST00000586718 TFCP2L1Q9NZI6 479 aa10.55□□□□□ -0.72
NPC1-204ENST00000586718 SRP68Q9UHB9 627 aaKnown RBP10.55□□□□□ -0.72
NPC1-204ENST00000586718 FAM177BA6PVY3 158 aa10.54□□□□□ -0.72
NPC1-204ENST00000586718 PDE8AO60658 829 aa10.54□□□□□ -0.72
NPC1-204ENST00000586718 NTSR2O95665 410 aa10.54□□□□□ -0.72
NPC1-204ENST00000586718 GTF2E1P29083 439 aaPredicted RBP10.54□□□□□ -0.72
NPC1-204ENST00000586718 CTSWP56202 376 aa10.54□□□□□ -0.72
NPC1-204ENST00000586718 G3BP1Q13283 466 aaKnown RBP eCLIP10.54□□□□□ -0.72
NPC1-204ENST00000586718 LMBR1LQ6UX01 489 aa10.54□□□□□ -0.72
NPC1-204ENST00000586718 JARID2Q92833 1246 aaPredicted RBP10.54□□□□□ -0.72
NPC1-204ENST00000586718 KAZALD1Q96I82 304 aa10.54□□□□□ -0.72
NPC1-204ENST00000586718 SPEF2Q9C093 1822 aa10.54□□□□□ -0.72
NPC1-204ENST00000586718 RIC1Q4ADV7 1423 aa10.53□□□□□ -0.72
NPC1-204ENST00000586718 FOXO4P98177 505 aa10.53□□□□□ -0.72
NPC1-204ENST00000586718 ZNF827Q17R98 1081 aa10.53□□□□□ -0.72
NPC1-204ENST00000586718 CCDC57Q2TAC2 916 aa10.53□□□□□ -0.72
NPC1-204ENST00000586718 EPHA10Q5JZY3 1008 aa10.53□□□□□ -0.72
NPC1-204ENST00000586718 SUSD4Q5VX71 490 aa10.53□□□□□ -0.72
NPC1-204ENST00000586718 BICDL1Q6ZP65 573 aa10.53□□□□□ -0.72
NPC1-204ENST00000586718 NBPF5PQ86XG9 351 aaPredicted RBP10.53□□□□□ -0.72
NPC1-204ENST00000586718 CCDC125Q86Z20 511 aa10.53□□□□□ -0.72
NPC1-204ENST00000586718 AKT1S1Q96B36 256 aa10.53□□□□□ -0.72
NPC1-204ENST00000586718 NOP58Q9Y2X3 529 aaKnown RBP10.53□□□□□ -0.72
NPC1-204ENST00000586718 MSH5O43196 834 aa10.52□□□□□ -0.73
NPC1-204ENST00000586718 EN1Q05925 392 aaPredicted RBP10.52□□□□□ -0.73
NPC1-204ENST00000586718 EZH2Q15910 746 aaKnown RBP10.52□□□□□ -0.73
NPC1-204ENST00000586718 FAM161AQ3B820 660 aa10.52□□□□□ -0.73
NPC1-204ENST00000586718 CCDC152Q4G0S7 254 aa10.52□□□□□ -0.73
NPC1-204ENST00000586718 TBC1D9BQ66K14 1250 aa10.52□□□□□ -0.73
NPC1-204ENST00000586718 PROM2Q8N271 834 aa10.52□□□□□ -0.73
NPC1-204ENST00000586718 GPATCH3Q96I76 525 aa10.52□□□□□ -0.73
NPC1-204ENST00000586718 BCL2L12Q9HB09 334 aa10.52□□□□□ -0.73
NPC1-204ENST00000586718 COPRSQ9NQ92 184 aa10.52□□□□□ -0.73
NPC1-204ENST00000586718 RTL9Q8NET4 1388 aa10.52□□□□□ -0.73
NPC1-204ENST00000586718 TNRC6CQ9HCJ0 1690 aaKnown RBP10.51□□□□□ -0.73
NPC1-204ENST00000586718 ANKRD18BA2A2Z9 1011 aa10.51□□□□□ -0.73
NPC1-204ENST00000586718 ST5P78524 1137 aa10.51□□□□□ -0.73
NPC1-204ENST00000586718 IFIT5Q13325 482 aaKnown RBP10.51□□□□□ -0.73
NPC1-204ENST00000586718 AMIGO3Q86WK7 504 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms