RNA–Protein interactions for RNA: ENST00000586287.1

TREM1-203, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

TSL 2

Gene TREM1, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-203ENST00000586287 CCDC191Q8NCU4 936 aa10.38□□□□□ -0.75
TREM1-203ENST00000586287 ZBTB40Q9NUA8 1239 aa10.38□□□□□ -0.75
TREM1-203ENST00000586287 ZNF652Q9Y2D9 606 aa10.38□□□□□ -0.75
TREM1-203ENST00000586287 N4BP2Q86UW6 1770 aaPredicted RBP10.37□□□□□ -0.75
TREM1-203ENST00000586287 H7C1W4 665 aa10.37□□□□□ -0.75
TREM1-203ENST00000586287 GPTP24298 496 aa10.37□□□□□ -0.75
TREM1-203ENST00000586287 CASP7P55210 303 aa10.37□□□□□ -0.75
TREM1-203ENST00000586287 NFIXQ14938 502 aa10.37□□□□□ -0.75
TREM1-203ENST00000586287 QSER1Q2KHR3 1735 aa10.37□□□□□ -0.75
TREM1-203ENST00000586287 SUSD4Q5VX71 490 aa10.37□□□□□ -0.75
TREM1-203ENST00000586287 CWC25Q9NXE8 425 aaPredicted RBP10.37□□□□□ -0.75
TREM1-203ENST00000586287 NIP7Q9Y221 180 aaKnown RBP eCLIP10.37□□□□□ -0.75
TREM1-203ENST00000586287 GRM8O00222 908 aa10.36□□□□□ -0.75
TREM1-203ENST00000586287 CACNB1Q02641 598 aaPredicted RBP10.36□□□□□ -0.75
TREM1-203ENST00000586287 BICDL1Q6ZP65 573 aa10.36□□□□□ -0.75
TREM1-203ENST00000586287 SYNE4Q8N205 404 aa10.36□□□□□ -0.75
TREM1-203ENST00000586287 JARID2Q92833 1246 aaPredicted RBP10.36□□□□□ -0.75
TREM1-203ENST00000586287 KAZALD1Q96I82 304 aa10.36□□□□□ -0.75
TREM1-203ENST00000586287 RNF216Q9NWF9 866 aaPredicted RBP10.36□□□□□ -0.75
TREM1-203ENST00000586287 ANKRD36CQ5JPF3 1778 aa10.35□□□□□ -0.75
TREM1-203ENST00000586287 NTSR2O95665 410 aa10.35□□□□□ -0.75
TREM1-203ENST00000586287 PCCAP05165 728 aaPredicted RBP10.35□□□□□ -0.75
TREM1-203ENST00000586287 NEFLP07196 543 aa10.35□□□□□ -0.75
TREM1-203ENST00000586287 DDR1Q08345 913 aa10.35□□□□□ -0.75
TREM1-203ENST00000586287 R3HDM1Q15032 1099 aaKnown RBP10.35□□□□□ -0.75
TREM1-203ENST00000586287 PARP10Q53GL7 1025 aa10.35□□□□□ -0.75
TREM1-203ENST00000586287 NLGN1Q8N2Q7 840 aa10.35□□□□□ -0.75
TREM1-203ENST00000586287 ZBTB38Q8NAP3 1195 aaPredicted RBP10.35□□□□□ -0.75
TREM1-203ENST00000586287 C9orf78Q9NZ63 289 aaPredicted RBP10.35□□□□□ -0.75
TREM1-203ENST00000586287 POLRMTO00411 1230 aaKnown RBP10.34□□□□□ -0.75
TREM1-203ENST00000586287 GNAI3P08754 354 aa10.34□□□□□ -0.75
TREM1-203ENST00000586287 UBE3BQ7Z3V4 1068 aa10.34□□□□□ -0.75
TREM1-203ENST00000586287 SLC16A10Q8TF71 515 aa10.34□□□□□ -0.75
TREM1-203ENST00000586287 FAM89AQ96GI7 184 aa10.34□□□□□ -0.75
TREM1-203ENST00000586287 SUCLG2Q96I99 432 aa10.34□□□□□ -0.75
TREM1-203ENST00000586287 SETDB2Q96T68 719 aa10.34□□□□□ -0.75
TREM1-203ENST00000586287 UTP14AQ9BVJ6 771 aaKnown RBP10.34□□□□□ -0.75
TREM1-203ENST00000586287 PCDHB15Q9Y5E8 787 aa10.34□□□□□ -0.75
TREM1-203ENST00000586287 FAM177BA6PVY3 158 aa10.33□□□□□ -0.76
TREM1-203ENST00000586287 UBTFL1P0CB47 393 aaPredicted RBP10.33□□□□□ -0.76
TREM1-203ENST00000586287 RTL5Q5HYW3 569 aaPredicted RBP10.33□□□□□ -0.76
TREM1-203ENST00000586287 EPHA10Q5JZY3 1008 aa10.33□□□□□ -0.76
TREM1-203ENST00000586287 ERICH6BQ5W0A0 696 aa10.33□□□□□ -0.76
TREM1-203ENST00000586287 MSL1Q68DK7 614 aa10.33□□□□□ -0.76
TREM1-203ENST00000586287 PPP1R42Q7Z4L9 355 aa10.33□□□□□ -0.76
TREM1-203ENST00000586287 CHMP4BQ9H444 224 aaKnown RBP10.33□□□□□ -0.76
TREM1-203ENST00000586287 C1orf115Q9H7X2 142 aa10.33□□□□□ -0.76
TREM1-203ENST00000586287 TRMT112Q9UI30 125 aaKnown RBP10.33□□□□□ -0.76
TREM1-203ENST00000586287 LRRFIP2Q9Y608 721 aaKnown RBP10.33□□□□□ -0.76
TREM1-203ENST00000586287 AFDNP55196 1824 aaKnown RBP10.33□□□□□ -0.76
TREM1-203ENST00000586287 COL24A1Q17RW2 1714 aa10.33□□□□□ -0.76
TREM1-203ENST00000586287 CDHR2Q9BYE9 1310 aa10.33□□□□□ -0.76
TREM1-203ENST00000586287 CARMIL3Q8ND23 1372 aa10.32□□□□□ -0.76
TREM1-203ENST00000586287 PSDA5PKW4 1024 aaPredicted RBP10.32□□□□□ -0.76
TREM1-203ENST00000586287 GNAI2P04899 355 aa10.32□□□□□ -0.76
TREM1-203ENST00000586287 SERPINB2P05120 415 aa10.32□□□□□ -0.76
TREM1-203ENST00000586287 MMP10P09238 476 aa10.32□□□□□ -0.76
TREM1-203ENST00000586287 FOXO4P98177 505 aa10.32□□□□□ -0.76
TREM1-203ENST00000586287 AAMPQ13685 434 aa10.32□□□□□ -0.76
TREM1-203ENST00000586287 ERFEQ4G0M1 354 aa10.32□□□□□ -0.76
TREM1-203ENST00000586287 SLC10A5Q5PT55 438 aa10.32□□□□□ -0.76
TREM1-203ENST00000586287 NUTM1Q86Y26 1132 aa10.32□□□□□ -0.76
TREM1-203ENST00000586287 SIRT2Q8IXJ6 389 aa10.32□□□□□ -0.76
TREM1-203ENST00000586287 PLA2G12BQ9BX93 195 aa10.32□□□□□ -0.76
TREM1-203ENST00000586287 GTF3C3Q9Y5Q9 886 aa10.32□□□□□ -0.76
TREM1-203ENST00000586287 SH3TC1Q8TE82 1336 aa10.32□□□□□ -0.76
TREM1-203ENST00000586287 CASZ1Q86V15 1759 aa10.31□□□□□ -0.76
TREM1-203ENST00000586287 ABCC12Q96J65 1359 aa10.31□□□□□ -0.76
TREM1-203ENST00000586287 IRS4O14654 1257 aaPredicted RBP10.31□□□□□ -0.76
TREM1-203ENST00000586287 RABL6Q3YEC7 729 aaPredicted RBP10.31□□□□□ -0.76
TREM1-203ENST00000586287 PRR5LQ6MZQ0 368 aa10.31□□□□□ -0.76
TREM1-203ENST00000586287 CEP85Q6P2H3 762 aa10.31□□□□□ -0.76
TREM1-203ENST00000586287 TPTE2Q6XPS3 522 aa10.31□□□□□ -0.76
TREM1-203ENST00000586287 NBPF5PQ86XG9 351 aaPredicted RBP10.31□□□□□ -0.76
TREM1-203ENST00000586287 ANKRD44Q8N8A2 993 aa10.31□□□□□ -0.76
TREM1-203ENST00000586287 NYXQ9GZU5 481 aa10.31□□□□□ -0.76
TREM1-203ENST00000586287 BICC1Q9H694 974 aaKnown RBP10.31□□□□□ -0.76
TREM1-203ENST00000586287 CSF1RP07333 972 aa10.3□□□□□ -0.76
TREM1-203ENST00000586287 HCLS1P14317 486 aaPredicted RBP10.3□□□□□ -0.76
TREM1-203ENST00000586287 ATP8B2P98198 1209 aa10.3□□□□□ -0.76
TREM1-203ENST00000586287 MTX1Q13505 466 aa10.3□□□□□ -0.76
TREM1-203ENST00000586287 RPAP2Q8IXW5 612 aaPredicted RBP10.3□□□□□ -0.76
TREM1-203ENST00000586287 CCDC24Q8N4L8 307 aa10.3□□□□□ -0.76
TREM1-203ENST00000586287 MTFR1LQ9H019 292 aa10.3□□□□□ -0.76
TREM1-203ENST00000586287 PNMA6EA0A0J9YXQ4 647 aa10.29□□□□□ -0.76
TREM1-203ENST00000586287 PDE8AO60658 829 aa10.29□□□□□ -0.76
TREM1-203ENST00000586287 ZBTB7AO95365 584 aa10.29□□□□□ -0.76
TREM1-203ENST00000586287 C3orf67Q6ZVT6 689 aa10.29□□□□□ -0.76
TREM1-203ENST00000586287 TTLL11Q8NHH1 800 aa10.29□□□□□ -0.76
TREM1-203ENST00000586287 SGIP1Q9BQI5 828 aa10.29□□□□□ -0.76
TREM1-203ENST00000586287 HDAC5Q9UQL6 1122 aa10.29□□□□□ -0.76
TREM1-203ENST00000586287 PARP3Q9Y6F1 533 aa10.29□□□□□ -0.76
TREM1-203ENST00000586287 NRXN2Q9P2S2 1712 aa10.29□□□□□ -0.76
TREM1-203ENST00000586287 IGHDP01880 384 aa10.28□□□□□ -0.76
TREM1-203ENST00000586287 RFX5P48382 616 aaPredicted RBP10.28□□□□□ -0.76
TREM1-203ENST00000586287 CTSWP56202 376 aa10.28□□□□□ -0.76
TREM1-203ENST00000586287 SF3B3Q15393 1217 aaKnown RBP10.28□□□□□ -0.76
TREM1-203ENST00000586287 LMBR1LQ6UX01 489 aa10.28□□□□□ -0.76
TREM1-203ENST00000586287 CNBD1Q8NA66 436 aa10.28□□□□□ -0.76
TREM1-203ENST00000586287 SSH3Q8TE77 659 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms