RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 ELL2O00472 640 aaPredicted RBP11.15□□□□□ -0.62
ATG4D-202ENST00000585437 NPHP1O15259 732 aa11.15□□□□□ -0.62
ATG4D-202ENST00000585437 NPR1P16066 1061 aa11.15□□□□□ -0.62
ATG4D-202ENST00000585437 AIMP1Q12904 312 aaKnown RBP11.15□□□□□ -0.62
ATG4D-202ENST00000585437 TCIRG1Q13488 830 aa11.15□□□□□ -0.62
ATG4D-202ENST00000585437 TWISTNBQ3B726 338 aaPredicted RBP11.15□□□□□ -0.62
ATG4D-202ENST00000585437 CCDC30Q5VVM6 783 aa11.15□□□□□ -0.62
ATG4D-202ENST00000585437 PRPF40BQ6NWY9 871 aaKnown RBP11.15□□□□□ -0.62
ATG4D-202ENST00000585437 ANKRD13DQ6ZTN6 518 aa11.15□□□□□ -0.62
ATG4D-202ENST00000585437 NLRP10Q86W26 655 aa11.15□□□□□ -0.62
ATG4D-202ENST00000585437 NUTM1Q86Y26 1132 aa11.15□□□□□ -0.62
ATG4D-202ENST00000585437 CNKSR1Q969H4 720 aa11.15□□□□□ -0.62
ATG4D-202ENST00000585437 ISCA1Q9BUE6 129 aa11.15□□□□□ -0.62
ATG4D-202ENST00000585437 CHMP4AQ9BY43 222 aa11.15□□□□□ -0.62
ATG4D-202ENST00000585437 SPINK5Q9NQ38 1064 aaPredicted RBP11.15□□□□□ -0.62
ATG4D-202ENST00000585437 WDR90Q96KV7 1748 aa11.15□□□□□ -0.63
ATG4D-202ENST00000585437 LTBP3Q9NS15 1303 aa11.14□□□□□ -0.63
ATG4D-202ENST00000585437 A0A1B0GUL6 1792 aa11.14□□□□□ -0.63
ATG4D-202ENST00000585437 FAM177BA6PVY3 158 aa11.14□□□□□ -0.63
ATG4D-202ENST00000585437 HOXA10P31260 410 aaPredicted RBP11.14□□□□□ -0.63
ATG4D-202ENST00000585437 SLC10A5Q5PT55 438 aa11.14□□□□□ -0.63
ATG4D-202ENST00000585437 ARHGAP27Q6ZUM4 889 aa11.14□□□□□ -0.63
ATG4D-202ENST00000585437 PPP1R42Q7Z4L9 355 aa11.14□□□□□ -0.63
ATG4D-202ENST00000585437 C7orf43Q8WVR3 580 aa11.14□□□□□ -0.63
ATG4D-202ENST00000585437 PHAXQ9H814 394 aaKnown RBP11.14□□□□□ -0.63
ATG4D-202ENST00000585437 ZC3H4Q9UPT8 1303 aaKnown RBP11.13□□□□□ -0.63
ATG4D-202ENST00000585437 DUOX1Q9NRD9 1551 aa11.13□□□□□ -0.63
ATG4D-202ENST00000585437 PRELPP51888 382 aa11.13□□□□□ -0.63
ATG4D-202ENST00000585437 TRIM28Q13263 835 aaKnown RBP11.13□□□□□ -0.63
ATG4D-202ENST00000585437 ZNF622Q969S3 477 aaKnown RBP eCLIP11.13□□□□□ -0.63
ATG4D-202ENST00000585437 GTF2E1P29083 439 aaPredicted RBP11.12□□□□□ -0.63
ATG4D-202ENST00000585437 RASSF7Q02833 373 aa11.12□□□□□ -0.63
ATG4D-202ENST00000585437 C3orf67Q6ZVT6 689 aa11.12□□□□□ -0.63
ATG4D-202ENST00000585437 UTP14AQ9BVJ6 771 aaKnown RBP11.12□□□□□ -0.63
ATG4D-202ENST00000585437 SALL2Q9Y467 1007 aaPredicted RBP11.12□□□□□ -0.63
ATG4D-202ENST00000585437 SCN4AP35499 1836 aa11.12□□□□□ -0.63
ATG4D-202ENST00000585437 SH3TC1Q8TE82 1336 aa11.11□□□□□ -0.63
ATG4D-202ENST00000585437 C21orf2O43822 256 aa11.11□□□□□ -0.63
ATG4D-202ENST00000585437 VAMP4O75379 141 aa11.11□□□□□ -0.63
ATG4D-202ENST00000585437 EXOSC9Q06265 439 aaKnown RBP11.11□□□□□ -0.63
ATG4D-202ENST00000585437 GOLGA2Q08379 1002 aa11.11□□□□□ -0.63
ATG4D-202ENST00000585437 SOGA3Q5TF21 947 aa11.11□□□□□ -0.63
ATG4D-202ENST00000585437 C9orf131Q5VYM1 1079 aa11.11□□□□□ -0.63
ATG4D-202ENST00000585437 MYH16Q9H6N6 1097 aa11.11□□□□□ -0.63
ATG4D-202ENST00000585437 COL4A5P29400 1685 aa11.11□□□□□ -0.63
ATG4D-202ENST00000585437 PSME4Q14997 1843 aa11.1□□□□□ -0.63
ATG4D-202ENST00000585437 LMNB1P20700 586 aa11.1□□□□□ -0.63
ATG4D-202ENST00000585437 ALDH1B1P30837 517 aa11.1□□□□□ -0.63
ATG4D-202ENST00000585437 CRAMP1Q96RY5 1269 aa11.1□□□□□ -0.63
ATG4D-202ENST00000585437 STK31Q9BXU1 1019 aa11.1□□□□□ -0.63
ATG4D-202ENST00000585437 RNF181Q9P0P0 153 aa11.1□□□□□ -0.63
ATG4D-202ENST00000585437 TRMT112Q9UI30 125 aaKnown RBP11.1□□□□□ -0.63
ATG4D-202ENST00000585437 ATP5J2-PTCD1G3V325 749 aa11.09□□□□□ -0.63
ATG4D-202ENST00000585437 DDX58O95786 925 aaKnown RBP11.09□□□□□ -0.63
ATG4D-202ENST00000585437 CCDC93Q567U6 631 aa11.09□□□□□ -0.63
ATG4D-202ENST00000585437 KSR2Q6VAB6 950 aa11.09□□□□□ -0.63
ATG4D-202ENST00000585437 G2E3Q7L622 706 aa11.09□□□□□ -0.63
ATG4D-202ENST00000585437 RIC3Q7Z5B4 369 aa11.09□□□□□ -0.63
ATG4D-202ENST00000585437 SYNE4Q8N205 404 aa11.09□□□□□ -0.63
ATG4D-202ENST00000585437 RPGRQ92834 1020 aaKnown RBP11.09□□□□□ -0.63
ATG4D-202ENST00000585437 NLRP3Q96P20 1036 aa11.09□□□□□ -0.63
ATG4D-202ENST00000585437 METTL22Q9BUU2 404 aaPredicted RBP11.09□□□□□ -0.63
ATG4D-202ENST00000585437 TAOK3Q9H2K8 898 aa11.09□□□□□ -0.63
ATG4D-202ENST00000585437 GTF3C3Q9Y5Q9 886 aa11.09□□□□□ -0.63
ATG4D-202ENST00000585437 ZNF646O15015 1829 aaPredicted RBP11.09□□□□□ -0.63
ATG4D-202ENST00000585437 ABCC4O15439 1325 aa11.09□□□□□ -0.63
ATG4D-202ENST00000585437 FLIIQ13045 1269 aa11.08□□□□□ -0.64
ATG4D-202ENST00000585437 CCDC191Q8NCU4 936 aa11.08□□□□□ -0.64
ATG4D-202ENST00000585437 GPBP1L1Q9HC44 474 aaPredicted RBP11.08□□□□□ -0.64
ATG4D-202ENST00000585437 MAP3K2Q9Y2U5 619 aa11.08□□□□□ -0.64
ATG4D-202ENST00000585437 ADAMTSL1Q8N6G6 1762 aa11.08□□□□□ -0.64
ATG4D-202ENST00000585437 PI4KAP2A4QPH2 592 aa11.07□□□□□ -0.64
ATG4D-202ENST00000585437 TCERG1O14776 1098 aaKnown RBP11.07□□□□□ -0.64
ATG4D-202ENST00000585437 SLC4A2P04920 1241 aa11.07□□□□□ -0.64
ATG4D-202ENST00000585437 IGKV5-2P06315 115 aa11.07□□□□□ -0.64
ATG4D-202ENST00000585437 HCLS1P14317 486 aaPredicted RBP11.07□□□□□ -0.64
ATG4D-202ENST00000585437 FKBP4Q02790 459 aaKnown RBP eCLIP11.07□□□□□ -0.64
ATG4D-202ENST00000585437 SF3B3Q15393 1217 aaKnown RBP11.07□□□□□ -0.64
ATG4D-202ENST00000585437 CC2D2BQ6DHV5 1058 aa11.07□□□□□ -0.64
ATG4D-202ENST00000585437 OLFM4Q6UX06 510 aa11.07□□□□□ -0.64
ATG4D-202ENST00000585437 TRMT2AQ8IZ69 625 aaKnown RBP11.07□□□□□ -0.64
ATG4D-202ENST00000585437 PI4KAP1Q8N8J0 262 aa11.07□□□□□ -0.64
ATG4D-202ENST00000585437 ZBTB38Q8NAP3 1195 aaPredicted RBP11.07□□□□□ -0.64
ATG4D-202ENST00000585437 FAM89AQ96GI7 184 aa11.07□□□□□ -0.64
ATG4D-202ENST00000585437 RBM17Q96I25 401 aaKnown RBP11.07□□□□□ -0.64
ATG4D-202ENST00000585437 MYD88Q99836 296 aa11.07□□□□□ -0.64
ATG4D-202ENST00000585437 ZNF219Q9P2Y4 722 aaPredicted RBP11.07□□□□□ -0.64
ATG4D-202ENST00000585437 CDHR2Q9BYE9 1310 aa11.07□□□□□ -0.64
ATG4D-202ENST00000585437 E9PSI1 815 aa11.06□□□□□ -0.64
ATG4D-202ENST00000585437 KIF3CO14782 793 aa11.06□□□□□ -0.64
ATG4D-202ENST00000585437 PPEF1O14829 653 aaPredicted RBP11.06□□□□□ -0.64
ATG4D-202ENST00000585437 PCCAP05165 728 aaPredicted RBP11.06□□□□□ -0.64
ATG4D-202ENST00000585437 SLFN5Q08AF3 891 aa11.06□□□□□ -0.64
ATG4D-202ENST00000585437 GRIPAP1Q4V328 841 aa11.06□□□□□ -0.64
ATG4D-202ENST00000585437 SLC51AQ86UW1 340 aa11.06□□□□□ -0.64
ATG4D-202ENST00000585437 RTKN2Q8IZC4 609 aa11.06□□□□□ -0.64
ATG4D-202ENST00000585437 PSMD1Q99460 953 aa11.06□□□□□ -0.64
ATG4D-202ENST00000585437 CWC25Q9NXE8 425 aaPredicted RBP11.06□□□□□ -0.64
ATG4D-202ENST00000585437 NEURL1BA8MQ27 555 aa11.05□□□□□ -0.64
ATG4D-202ENST00000585437 ZNF526Q8TF50 670 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms