RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 FRAT1Q92837 279 aaPredicted RBP17.61■□□□□ 0.41
TRAF4-215ENST00000584944 PTPRCP08575 1304 aa17.61■□□□□ 0.41
TRAF4-215ENST00000584944 SCN7AQ01118 1682 aa17.61■□□□□ 0.41
TRAF4-215ENST00000584944 TCIRG1Q13488 830 aa17.6■□□□□ 0.41
TRAF4-215ENST00000584944 C9orf131Q5VYM1 1079 aa17.6■□□□□ 0.41
TRAF4-215ENST00000584944 SLC4A10Q6U841 1118 aa17.6■□□□□ 0.41
TRAF4-215ENST00000584944 MRPL50Q8N5N7 158 aaKnown RBP17.6■□□□□ 0.41
TRAF4-215ENST00000584944 MYD88Q99836 296 aa17.6■□□□□ 0.41
TRAF4-215ENST00000584944 DNAAF4Q8WXU2 420 aa17.59■□□□□ 0.41
TRAF4-215ENST00000584944 METTL22Q9BUU2 404 aaPredicted RBP17.59■□□□□ 0.41
TRAF4-215ENST00000584944 AFDNP55196 1824 aaKnown RBP17.58■□□□□ 0.41
TRAF4-215ENST00000584944 ATP5J2-PTCD1G3V325 749 aa17.58■□□□□ 0.4
TRAF4-215ENST00000584944 TOMM70O94826 608 aa17.58■□□□□ 0.4
TRAF4-215ENST00000584944 UTP14AQ9BVJ6 771 aaKnown RBP17.58■□□□□ 0.4
TRAF4-215ENST00000584944 API5Q9BZZ5 524 aaKnown RBP17.58■□□□□ 0.4
TRAF4-215ENST00000584944 NMRK2Q9NPI5 230 aa17.58■□□□□ 0.4
TRAF4-215ENST00000584944 TRMT112Q9UI30 125 aaKnown RBP17.58■□□□□ 0.4
TRAF4-215ENST00000584944 NRXN2Q9P2S2 1712 aa17.58■□□□□ 0.4
TRAF4-215ENST00000584944 HSP90B1P14625 803 aaKnown RBP17.57■□□□□ 0.4
TRAF4-215ENST00000584944 ZNF34Q8IZ26 560 aa17.57■□□□□ 0.4
TRAF4-215ENST00000584944 RCAN3Q9UKA8 241 aa17.57■□□□□ 0.4
TRAF4-215ENST00000584944 NOB1Q9ULX3 412 aaKnown RBP17.57■□□□□ 0.4
TRAF4-215ENST00000584944 BCORQ6W2J9 1755 aa17.57■□□□□ 0.4
TRAF4-215ENST00000584944 CWC25Q9NXE8 425 aaPredicted RBP17.56■□□□□ 0.4
TRAF4-215ENST00000584944 SBF1O95248 1867 aa17.56■□□□□ 0.4
TRAF4-215ENST00000584944 F6X3S4 739 aa17.55■□□□□ 0.4
TRAF4-215ENST00000584944 NLRP10Q86W26 655 aa17.55■□□□□ 0.4
TRAF4-215ENST00000584944 RNF181Q9P0P0 153 aa17.55■□□□□ 0.4
TRAF4-215ENST00000584944 CACNA1FO60840 1977 aa17.55■□□□□ 0.4
TRAF4-215ENST00000584944 BCAR3O75815 825 aa17.54■□□□□ 0.4
TRAF4-215ENST00000584944 PDE6BP35913 854 aa17.54■□□□□ 0.4
TRAF4-215ENST00000584944 FTSJ3Q8IY81 847 aaKnown RBP17.54■□□□□ 0.4
TRAF4-215ENST00000584944 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.54■□□□□ 0.4
TRAF4-215ENST00000584944 CCDC191Q8NCU4 936 aa17.54■□□□□ 0.4
TRAF4-215ENST00000584944 RNF123Q5XPI4 1314 aa17.53■□□□□ 0.4
TRAF4-215ENST00000584944 SH3TC1Q8TE82 1336 aa17.53■□□□□ 0.4
TRAF4-215ENST00000584944 APLP1P51693 650 aa17.53■□□□□ 0.4
TRAF4-215ENST00000584944 SUSD4Q5VX71 490 aa17.53■□□□□ 0.4
TRAF4-215ENST00000584944 ZKSCAN2Q63HK3 967 aa17.53■□□□□ 0.4
TRAF4-215ENST00000584944 PRR5LQ6MZQ0 368 aa17.53■□□□□ 0.4
TRAF4-215ENST00000584944 LINS1Q8NG48 757 aa17.53■□□□□ 0.4
TRAF4-215ENST00000584944 SRCIN1Q9C0H9 1055 aa17.53■□□□□ 0.4
TRAF4-215ENST00000584944 UBN2Q6ZU65 1347 aa17.52■□□□□ 0.4
TRAF4-215ENST00000584944 BRPF1P55201 1214 aaPredicted RBP17.52■□□□□ 0.4
TRAF4-215ENST00000584944 TRIM28Q13263 835 aaKnown RBP17.52■□□□□ 0.4
TRAF4-215ENST00000584944 RTL5Q5HYW3 569 aaPredicted RBP17.52■□□□□ 0.4
TRAF4-215ENST00000584944 NUTM1Q86Y26 1132 aa17.52■□□□□ 0.4
TRAF4-215ENST00000584944 CCDC24Q8N4L8 307 aa17.52■□□□□ 0.4
TRAF4-215ENST00000584944 ARHGAP45Q92619 1136 aa17.52■□□□□ 0.4
TRAF4-215ENST00000584944 ISCA1Q9BUE6 129 aa17.52■□□□□ 0.4
TRAF4-215ENST00000584944 BRIP1Q9BX63 1249 aa17.52■□□□□ 0.4
TRAF4-215ENST00000584944 C9orf78Q9NZ63 289 aaPredicted RBP17.52■□□□□ 0.4
TRAF4-215ENST00000584944 IBTKQ9P2D0 1353 aaPredicted RBP17.52■□□□□ 0.39
TRAF4-215ENST00000584944 NUP98P52948 1817 aa17.51■□□□□ 0.39
TRAF4-215ENST00000584944 DLEC1Q9Y238 1755 aa17.51■□□□□ 0.39
TRAF4-215ENST00000584944 H0YIN7 160 aa17.51■□□□□ 0.39
TRAF4-215ENST00000584944 MS4A1P11836 297 aa17.51■□□□□ 0.39
TRAF4-215ENST00000584944 CCT4P50991 539 aaKnown RBP17.51■□□□□ 0.39
TRAF4-215ENST00000584944 CWF19L2Q2TBE0 894 aaKnown RBP17.51■□□□□ 0.39
TRAF4-215ENST00000584944 ERFEQ4G0M1 354 aa17.51■□□□□ 0.39
TRAF4-215ENST00000584944 IFFO2Q5TF58 517 aa17.51■□□□□ 0.39
TRAF4-215ENST00000584944 TTLL6Q8N841 843 aa17.51■□□□□ 0.39
TRAF4-215ENST00000584944 RBM46Q8TBY0 533 aaKnown RBP17.51■□□□□ 0.39
TRAF4-215ENST00000584944 PDZRN3Q9UPQ7 1066 aa17.51■□□□□ 0.39
TRAF4-215ENST00000584944 ARFGEF2Q9Y6D5 1785 aa17.51■□□□□ 0.39
TRAF4-215ENST00000584944 KDM2BQ8NHM5 1336 aa17.5■□□□□ 0.39
TRAF4-215ENST00000584944 NEURL1BA8MQ27 555 aa17.5■□□□□ 0.39
TRAF4-215ENST00000584944 RASSF7Q02833 373 aa17.5■□□□□ 0.39
TRAF4-215ENST00000584944 ATF7IPQ6VMQ6 1270 aa17.5■□□□□ 0.39
TRAF4-215ENST00000584944 C2CD5Q86YS7 1000 aa17.5■□□□□ 0.39
TRAF4-215ENST00000584944 DNAJC5GQ8N7S2 189 aa17.5■□□□□ 0.39
TRAF4-215ENST00000584944 ZBTB38Q8NAP3 1195 aaPredicted RBP17.5■□□□□ 0.39
TRAF4-215ENST00000584944 RPGRQ92834 1020 aaKnown RBP17.5■□□□□ 0.39
TRAF4-215ENST00000584944 FAM89AQ96GI7 184 aa17.5■□□□□ 0.39
TRAF4-215ENST00000584944 ALDH1L1O75891 902 aa17.49■□□□□ 0.39
TRAF4-215ENST00000584944 NTSR2O95665 410 aa17.49■□□□□ 0.39
TRAF4-215ENST00000584944 PRELPP51888 382 aa17.49■□□□□ 0.39
TRAF4-215ENST00000584944 CLUAP1Q96AJ1 413 aa17.49■□□□□ 0.39
TRAF4-215ENST00000584944 NLRP3Q96P20 1036 aa17.49■□□□□ 0.39
TRAF4-215ENST00000584944 GCKRQ14397 625 aa17.48■□□□□ 0.39
TRAF4-215ENST00000584944 BEND3Q5T5X7 828 aa17.48■□□□□ 0.39
TRAF4-215ENST00000584944 UBE3BQ7Z3V4 1068 aa17.48■□□□□ 0.39
TRAF4-215ENST00000584944 C16orf71Q8IYS4 520 aaPredicted RBP17.48■□□□□ 0.39
TRAF4-215ENST00000584944 RRAGCQ9HB90 399 aa17.48■□□□□ 0.39
TRAF4-215ENST00000584944 ZC3H4Q9UPT8 1303 aaKnown RBP17.47■□□□□ 0.39
TRAF4-215ENST00000584944 IRS4O14654 1257 aaPredicted RBP17.47■□□□□ 0.39
TRAF4-215ENST00000584944 PCCAP05165 728 aaPredicted RBP17.47■□□□□ 0.39
TRAF4-215ENST00000584944 IGKV5-2P06315 115 aa17.47■□□□□ 0.39
TRAF4-215ENST00000584944 LMNB1P20700 586 aa17.47■□□□□ 0.39
TRAF4-215ENST00000584944 FSTL1Q12841 308 aa17.47■□□□□ 0.39
TRAF4-215ENST00000584944 ZNF622Q969S3 477 aaKnown RBP eCLIP17.47■□□□□ 0.39
TRAF4-215ENST00000584944 HDAC5Q9UQL6 1122 aa17.47■□□□□ 0.39
TRAF4-215ENST00000584944 ANKRD36CQ5JPF3 1778 aa17.47■□□□□ 0.39
TRAF4-215ENST00000584944 ANKRD31Q8N7Z5 1873 aa17.46■□□□□ 0.39
TRAF4-215ENST00000584944 HCLS1P14317 486 aaPredicted RBP17.46■□□□□ 0.39
TRAF4-215ENST00000584944 TRIM27P14373 513 aa17.46■□□□□ 0.39
TRAF4-215ENST00000584944 TMX4Q9H1E5 349 aaPredicted RBP17.46■□□□□ 0.39
TRAF4-215ENST00000584944 TNRC6CQ9HCJ0 1690 aaKnown RBP17.45■□□□□ 0.38
TRAF4-215ENST00000584944 NFKBIEO00221 500 aa17.45■□□□□ 0.38
TRAF4-215ENST00000584944 GRM8O00222 908 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms