RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 POLRMTO00411 1230 aaKnown RBP10.6□□□□□ -0.71
ERBB2-216ENST00000584014 ST5P78524 1137 aa10.6□□□□□ -0.71
ERBB2-216ENST00000584014 CWF19L2Q2TBE0 894 aaKnown RBP10.6□□□□□ -0.71
ERBB2-216ENST00000584014 SUSD4Q5VX71 490 aa10.6□□□□□ -0.71
ERBB2-216ENST00000584014 TPTE2Q6XPS3 522 aa10.6□□□□□ -0.71
ERBB2-216ENST00000584014 PPP1R42Q7Z4L9 355 aa10.6□□□□□ -0.71
ERBB2-216ENST00000584014 METTL22Q9BUU2 404 aaPredicted RBP10.6□□□□□ -0.71
ERBB2-216ENST00000584014 FHDC1Q9C0D6 1143 aaPredicted RBP10.6□□□□□ -0.71
ERBB2-216ENST00000584014 CARMIL3Q8ND23 1372 aa10.6□□□□□ -0.71
ERBB2-216ENST00000584014 UBN2Q6ZU65 1347 aa10.59□□□□□ -0.71
ERBB2-216ENST00000584014 AFDNP55196 1824 aaKnown RBP10.59□□□□□ -0.71
ERBB2-216ENST00000584014 IPO8O15397 1037 aaKnown RBP10.59□□□□□ -0.71
ERBB2-216ENST00000584014 ERFEQ4G0M1 354 aa10.59□□□□□ -0.71
ERBB2-216ENST00000584014 ZNF34Q8IZ26 560 aa10.59□□□□□ -0.71
ERBB2-216ENST00000584014 UTP14AQ9BVJ6 771 aaKnown RBP10.59□□□□□ -0.71
ERBB2-216ENST00000584014 ADCY9O60503 1353 aa10.59□□□□□ -0.71
ERBB2-216ENST00000584014 PTPRCP08575 1304 aa10.58□□□□□ -0.71
ERBB2-216ENST00000584014 KIF16BQ96L93 1317 aa10.58□□□□□ -0.71
ERBB2-216ENST00000584014 ANKRD36CQ5JPF3 1778 aa10.58□□□□□ -0.72
ERBB2-216ENST00000584014 PLIN1O60240 522 aa10.58□□□□□ -0.72
ERBB2-216ENST00000584014 PARP10Q53GL7 1025 aa10.58□□□□□ -0.72
ERBB2-216ENST00000584014 ZKSCAN2Q63HK3 967 aa10.58□□□□□ -0.72
ERBB2-216ENST00000584014 NLRP10Q86W26 655 aa10.58□□□□□ -0.72
ERBB2-216ENST00000584014 SYNE4Q8N205 404 aa10.58□□□□□ -0.72
ERBB2-216ENST00000584014 FAM89AQ96GI7 184 aa10.58□□□□□ -0.72
ERBB2-216ENST00000584014 SGIP1Q9BQI5 828 aa10.58□□□□□ -0.72
ERBB2-216ENST00000584014 API5Q9BZZ5 524 aaKnown RBP10.58□□□□□ -0.72
ERBB2-216ENST00000584014 NYXQ9GZU5 481 aa10.58□□□□□ -0.72
ERBB2-216ENST00000584014 CWC25Q9NXE8 425 aaPredicted RBP10.58□□□□□ -0.72
ERBB2-216ENST00000584014 TNNQ9UQP3 1299 aa10.58□□□□□ -0.72
ERBB2-216ENST00000584014 A0A0G2JLW4 131 aa10.57□□□□□ -0.72
ERBB2-216ENST00000584014 EIF5BO60841 1220 aaKnown RBP10.57□□□□□ -0.72
ERBB2-216ENST00000584014 HCLS1P14317 486 aaPredicted RBP10.57□□□□□ -0.72
ERBB2-216ENST00000584014 PRR5LQ6MZQ0 368 aa10.57□□□□□ -0.72
ERBB2-216ENST00000584014 FTSJ3Q8IY81 847 aaKnown RBP10.57□□□□□ -0.72
ERBB2-216ENST00000584014 ISCA1Q9BUE6 129 aa10.57□□□□□ -0.72
ERBB2-216ENST00000584014 C9orf78Q9NZ63 289 aaPredicted RBP10.57□□□□□ -0.72
ERBB2-216ENST00000584014 NEURL1BA8MQ27 555 aa10.56□□□□□ -0.72
ERBB2-216ENST00000584014 IGKV5-2P06315 115 aa10.56□□□□□ -0.72
ERBB2-216ENST00000584014 CHRNA5P30532 468 aa10.56□□□□□ -0.72
ERBB2-216ENST00000584014 C2CD5Q86YS7 1000 aa10.56□□□□□ -0.72
ERBB2-216ENST00000584014 NLGN2Q8NFZ4 835 aa10.56□□□□□ -0.72
ERBB2-216ENST00000584014 LINS1Q8NG48 757 aa10.56□□□□□ -0.72
ERBB2-216ENST00000584014 ZNF622Q969S3 477 aaKnown RBP eCLIP10.56□□□□□ -0.72
ERBB2-216ENST00000584014 CCDC85AQ96PX6 553 aaPredicted RBP10.56□□□□□ -0.72
ERBB2-216ENST00000584014 SRCIN1Q9C0H9 1055 aa10.56□□□□□ -0.72
ERBB2-216ENST00000584014 ATP10DQ9P241 1426 aa10.56□□□□□ -0.72
ERBB2-216ENST00000584014 SH3TC1Q8TE82 1336 aa10.56□□□□□ -0.72
ERBB2-216ENST00000584014 H0YIN7 160 aa10.55□□□□□ -0.72
ERBB2-216ENST00000584014 NTSR2O95665 410 aa10.55□□□□□ -0.72
ERBB2-216ENST00000584014 DPEP1P16444 411 aa10.55□□□□□ -0.72
ERBB2-216ENST00000584014 BEND3Q5T5X7 828 aa10.55□□□□□ -0.72
ERBB2-216ENST00000584014 ATF7IPQ6VMQ6 1270 aa10.55□□□□□ -0.72
ERBB2-216ENST00000584014 UBE3BQ7Z3V4 1068 aa10.55□□□□□ -0.72
ERBB2-216ENST00000584014 CCDC191Q8NCU4 936 aa10.55□□□□□ -0.72
ERBB2-216ENST00000584014 SYT17Q9BSW7 474 aa10.55□□□□□ -0.72
ERBB2-216ENST00000584014 ZNF219Q9P2Y4 722 aaPredicted RBP10.55□□□□□ -0.72
ERBB2-216ENST00000584014 IRS4O14654 1257 aaPredicted RBP10.54□□□□□ -0.72
ERBB2-216ENST00000584014 RGL2O15211 777 aa10.54□□□□□ -0.72
ERBB2-216ENST00000584014 TRIM27P14373 513 aa10.54□□□□□ -0.72
ERBB2-216ENST00000584014 PDE6BP35913 854 aa10.54□□□□□ -0.72
ERBB2-216ENST00000584014 GCKRQ14397 625 aa10.54□□□□□ -0.72
ERBB2-216ENST00000584014 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.54□□□□□ -0.72
ERBB2-216ENST00000584014 PANK1Q8TE04 598 aa10.54□□□□□ -0.72
ERBB2-216ENST00000584014 RPGRQ92834 1020 aaKnown RBP10.54□□□□□ -0.72
ERBB2-216ENST00000584014 NLRP3Q96P20 1036 aa10.54□□□□□ -0.72
ERBB2-216ENST00000584014 CHMP3Q9Y3E7 222 aa10.54□□□□□ -0.72
ERBB2-216ENST00000584014 CD2APQ9Y5K6 639 aa10.54□□□□□ -0.72
ERBB2-216ENST00000584014 N4BP2Q86UW6 1770 aaPredicted RBP10.54□□□□□ -0.72
ERBB2-216ENST00000584014 ABCC12Q96J65 1359 aa10.53□□□□□ -0.72
ERBB2-216ENST00000584014 COL24A1Q17RW2 1714 aa10.53□□□□□ -0.72
ERBB2-216ENST00000584014 CCT4P50991 539 aaKnown RBP10.53□□□□□ -0.72
ERBB2-216ENST00000584014 ITPRIPQ8IWB1 547 aa10.53□□□□□ -0.72
ERBB2-216ENST00000584014 DZIP1LQ8IYY4 767 aaKnown RBP10.53□□□□□ -0.72
ERBB2-216ENST00000584014 ZBTB38Q8NAP3 1195 aaPredicted RBP10.53□□□□□ -0.72
ERBB2-216ENST00000584014 BRIP1Q9BX63 1249 aa10.53□□□□□ -0.72
ERBB2-216ENST00000584014 LRP5O75197 1615 aa10.53□□□□□ -0.72
ERBB2-216ENST00000584014 GRM8O00222 908 aa10.52□□□□□ -0.73
ERBB2-216ENST00000584014 ALDH1L1O75891 902 aa10.52□□□□□ -0.73
ERBB2-216ENST00000584014 PCCAP05165 728 aaPredicted RBP10.52□□□□□ -0.73
ERBB2-216ENST00000584014 BRPF1P55201 1214 aaPredicted RBP10.52□□□□□ -0.73
ERBB2-216ENST00000584014 TRIM28Q13263 835 aaKnown RBP10.52□□□□□ -0.73
ERBB2-216ENST00000584014 GPR162Q16538 588 aa10.52□□□□□ -0.73
ERBB2-216ENST00000584014 C3orf67Q6ZVT6 689 aa10.52□□□□□ -0.73
ERBB2-216ENST00000584014 TMEM57Q8N5G2 664 aa10.52□□□□□ -0.73
ERBB2-216ENST00000584014 ARHGAP45Q92619 1136 aa10.52□□□□□ -0.73
ERBB2-216ENST00000584014 BCS1LQ9Y276 419 aa10.52□□□□□ -0.73
ERBB2-216ENST00000584014 C10orf71Q711Q0 1435 aa10.51□□□□□ -0.73
ERBB2-216ENST00000584014 CACNA1SQ13698 1873 aa10.51□□□□□ -0.73
ERBB2-216ENST00000584014 ANKRD31Q8N7Z5 1873 aa10.51□□□□□ -0.73
ERBB2-216ENST00000584014 MS4A1P11836 297 aa10.51□□□□□ -0.73
ERBB2-216ENST00000584014 TGFB2P61812 414 aa10.51□□□□□ -0.73
ERBB2-216ENST00000584014 COG6Q9Y2V7 657 aa10.51□□□□□ -0.73
ERBB2-216ENST00000584014 SUPT16HQ9Y5B9 1047 aaKnown RBP10.51□□□□□ -0.73
ERBB2-216ENST00000584014 NRXN2Q9P2S2 1712 aa10.5□□□□□ -0.73
ERBB2-216ENST00000584014 H7C1W4 665 aa10.5□□□□□ -0.73
ERBB2-216ENST00000584014 PDE8AO60658 829 aa10.5□□□□□ -0.73
ERBB2-216ENST00000584014 NBPF7P0C2Y1 421 aaPredicted RBP10.5□□□□□ -0.73
ERBB2-216ENST00000584014 UBTFL1P0CB47 393 aaPredicted RBP10.5□□□□□ -0.73
ERBB2-216ENST00000584014 RLBP1P12271 317 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms