RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 GPTP24298 496 aa14.71□□□□□ -0.05
CDRT1-207ENST00000583965 TM4SF1P30408 202 aa14.71□□□□□ -0.05
CDRT1-207ENST00000583965 GCKRQ14397 625 aa14.71□□□□□ -0.05
CDRT1-207ENST00000583965 NFIXQ14938 502 aa14.71□□□□□ -0.05
CDRT1-207ENST00000583965 C20orf194Q5TEA3 1177 aa14.71□□□□□ -0.05
CDRT1-207ENST00000583965 ITPRIPQ8IWB1 547 aa14.71□□□□□ -0.05
CDRT1-207ENST00000583965 NYXQ9GZU5 481 aa14.71□□□□□ -0.05
CDRT1-207ENST00000583965 DDX19BQ9UMR2 479 aa14.71□□□□□ -0.05
CDRT1-207ENST00000583965 PDGFDQ9GZP0 370 aaPredicted RBP14.7□□□□□ -0.06
CDRT1-207ENST00000583965 MTFR1LQ9H019 292 aa14.7□□□□□ -0.06
CDRT1-207ENST00000583965 COG6Q9Y2V7 657 aa14.7□□□□□ -0.06
CDRT1-207ENST00000583965 KIF13BQ9NQT8 1826 aa14.69□□□□□ -0.06
CDRT1-207ENST00000583965 PSDA5PKW4 1024 aaPredicted RBP14.69□□□□□ -0.06
CDRT1-207ENST00000583965 GRM8O00222 908 aa14.69□□□□□ -0.06
CDRT1-207ENST00000583965 PCCAP05165 728 aaPredicted RBP14.69□□□□□ -0.06
CDRT1-207ENST00000583965 BICDL1Q6ZP65 573 aa14.69□□□□□ -0.06
CDRT1-207ENST00000583965 UTP14AQ9BVJ6 771 aaKnown RBP14.69□□□□□ -0.06
CDRT1-207ENST00000583965 C9orf78Q9NZ63 289 aaPredicted RBP14.69□□□□□ -0.06
CDRT1-207ENST00000583965 HDAC5Q9UQL6 1122 aa14.69□□□□□ -0.06
CDRT1-207ENST00000583965 ANKRD31Q8N7Z5 1873 aa14.69□□□□□ -0.06
CDRT1-207ENST00000583965 UTYO14607 1347 aa14.68□□□□□ -0.06
CDRT1-207ENST00000583965 POLRMTO00411 1230 aaKnown RBP14.68□□□□□ -0.06
CDRT1-207ENST00000583965 NTSR2O95665 410 aa14.68□□□□□ -0.06
CDRT1-207ENST00000583965 NEFLP07196 543 aa14.68□□□□□ -0.06
CDRT1-207ENST00000583965 GNAI3P08754 354 aa14.68□□□□□ -0.06
CDRT1-207ENST00000583965 SUSD4Q5VX71 490 aa14.68□□□□□ -0.06
CDRT1-207ENST00000583965 TPTE2Q6XPS3 522 aa14.68□□□□□ -0.06
CDRT1-207ENST00000583965 ZBTB38Q8NAP3 1195 aaPredicted RBP14.68□□□□□ -0.06
CDRT1-207ENST00000583965 USP44Q9H0E7 712 aa14.68□□□□□ -0.06
CDRT1-207ENST00000583965 TRMT112Q9UI30 125 aaKnown RBP14.68□□□□□ -0.06
CDRT1-207ENST00000583965 PARP3Q9Y6F1 533 aa14.68□□□□□ -0.06
CDRT1-207ENST00000583965 H7C1W4 665 aa14.67□□□□□ -0.06
CDRT1-207ENST00000583965 MMP10P09238 476 aa14.67□□□□□ -0.06
CDRT1-207ENST00000583965 HSP90B1P14625 803 aaKnown RBP14.67□□□□□ -0.06
CDRT1-207ENST00000583965 AAMPQ13685 434 aa14.67□□□□□ -0.06
CDRT1-207ENST00000583965 ERICH6BQ5W0A0 696 aa14.67□□□□□ -0.06
CDRT1-207ENST00000583965 MSL1Q68DK7 614 aa14.67□□□□□ -0.06
CDRT1-207ENST00000583965 NBPF5PQ86XG9 351 aaPredicted RBP14.67□□□□□ -0.06
CDRT1-207ENST00000583965 SH3TC1Q8TE82 1336 aa14.66□□□□□ -0.06
CDRT1-207ENST00000583965 CDHR2Q9BYE9 1310 aa14.66□□□□□ -0.06
CDRT1-207ENST00000583965 RIC1Q4ADV7 1423 aa14.66□□□□□ -0.06
CDRT1-207ENST00000583965 ZBTB7BO15156 539 aaPredicted RBP14.66□□□□□ -0.06
CDRT1-207ENST00000583965 SERPINB2P05120 415 aa14.66□□□□□ -0.06
CDRT1-207ENST00000583965 DDR1Q08345 913 aa14.66□□□□□ -0.06
CDRT1-207ENST00000583965 CRBNQ96SW2 442 aa14.66□□□□□ -0.06
CDRT1-207ENST00000583965 NPHP1O15259 732 aa14.65□□□□□ -0.06
CDRT1-207ENST00000583965 ZBTB7AO95365 584 aa14.65□□□□□ -0.06
CDRT1-207ENST00000583965 UBTFL1P0CB47 393 aaPredicted RBP14.65□□□□□ -0.06
CDRT1-207ENST00000583965 POLD1P28340 1107 aa14.65□□□□□ -0.06
CDRT1-207ENST00000583965 GTF2E1P29083 439 aaPredicted RBP14.65□□□□□ -0.06
CDRT1-207ENST00000583965 CASP7P55210 303 aa14.65□□□□□ -0.06
CDRT1-207ENST00000583965 UBE3BQ7Z3V4 1068 aa14.65□□□□□ -0.06
CDRT1-207ENST00000583965 CNBD1Q8NA66 436 aa14.65□□□□□ -0.06
CDRT1-207ENST00000583965 MEIS3Q99687 375 aa14.65□□□□□ -0.06
CDRT1-207ENST00000583965 FAM177BA6PVY3 158 aa14.64□□□□□ -0.07
CDRT1-207ENST00000583965 NBPF7P0C2Y1 421 aaPredicted RBP14.64□□□□□ -0.07
CDRT1-207ENST00000583965 ST5P78524 1137 aa14.64□□□□□ -0.07
CDRT1-207ENST00000583965 FAM89AQ96GI7 184 aa14.64□□□□□ -0.07
CDRT1-207ENST00000583965 TNRC6CQ9HCJ0 1690 aaKnown RBP14.63□□□□□ -0.07
CDRT1-207ENST00000583965 GNAI2P04899 355 aa14.63□□□□□ -0.07
CDRT1-207ENST00000583965 SLC10A5Q5PT55 438 aa14.63□□□□□ -0.07
CDRT1-207ENST00000583965 PRR5LQ6MZQ0 368 aa14.63□□□□□ -0.07
CDRT1-207ENST00000583965 PLA2G12BQ9BX93 195 aa14.63□□□□□ -0.07
CDRT1-207ENST00000583965 ZBTB40Q9NUA8 1239 aa14.63□□□□□ -0.07
CDRT1-207ENST00000583965 ATF5Q9Y2D1 282 aaPredicted RBP14.63□□□□□ -0.07
CDRT1-207ENST00000583965 DLEC1Q9Y238 1755 aa14.62□□□□□ -0.07
CDRT1-207ENST00000583965 IRS4O14654 1257 aaPredicted RBP14.62□□□□□ -0.07
CDRT1-207ENST00000583965 IRX6P78412 446 aaPredicted RBP14.62□□□□□ -0.07
CDRT1-207ENST00000583965 ERFEQ4G0M1 354 aa14.62□□□□□ -0.07
CDRT1-207ENST00000583965 NUTM1Q86Y26 1132 aa14.62□□□□□ -0.07
CDRT1-207ENST00000583965 SPON1Q9HCB6 807 aa14.62□□□□□ -0.07
CDRT1-207ENST00000583965 ABCC12Q96J65 1359 aa14.61□□□□□ -0.07
CDRT1-207ENST00000583965 CACNA1SQ13698 1873 aa14.61□□□□□ -0.07
CDRT1-207ENST00000583965 PDE8AO60658 829 aa14.61□□□□□ -0.07
CDRT1-207ENST00000583965 RTL5Q5HYW3 569 aaPredicted RBP14.61□□□□□ -0.07
CDRT1-207ENST00000583965 SYNE4Q8N205 404 aa14.61□□□□□ -0.07
CDRT1-207ENST00000583965 EXOC6Q8TAG9 804 aa14.61□□□□□ -0.07
CDRT1-207ENST00000583965 SUCLG2Q96I99 432 aa14.61□□□□□ -0.07
CDRT1-207ENST00000583965 SGIP1Q9BQI5 828 aa14.61□□□□□ -0.07
CDRT1-207ENST00000583965 SPEF2Q9C093 1822 aa14.61□□□□□ -0.07
CDRT1-207ENST00000583965 TAF1P21675 1872 aa14.61□□□□□ -0.07
CDRT1-207ENST00000583965 C10orf71Q711Q0 1435 aa14.6□□□□□ -0.07
CDRT1-207ENST00000583965 JARID2Q92833 1246 aaPredicted RBP14.6□□□□□ -0.07
CDRT1-207ENST00000583965 BRIP1Q9BX63 1249 aa14.6□□□□□ -0.07
CDRT1-207ENST00000583965 LRRFIP2Q9Y608 721 aaKnown RBP14.6□□□□□ -0.07
CDRT1-207ENST00000583965 COL11A2P13942 1736 aaPredicted RBP14.6□□□□□ -0.07
CDRT1-207ENST00000583965 HCLS1P14317 486 aaPredicted RBP14.59□□□□□ -0.07
CDRT1-207ENST00000583965 PTGER2P43116 358 aa14.59□□□□□ -0.07
CDRT1-207ENST00000583965 CTSWP56202 376 aa14.59□□□□□ -0.07
CDRT1-207ENST00000583965 KAZALD1Q96I82 304 aa14.59□□□□□ -0.07
CDRT1-207ENST00000583965 NLRP3Q96P20 1036 aa14.59□□□□□ -0.07
CDRT1-207ENST00000583965 BICC1Q9H694 974 aaKnown RBP14.59□□□□□ -0.07
CDRT1-207ENST00000583965 PDZRN3Q9UPQ7 1066 aa14.59□□□□□ -0.07
CDRT1-207ENST00000583965 LRP5O75197 1615 aa14.59□□□□□ -0.07
CDRT1-207ENST00000583965 BRCA1P38398 1863 aaKnown RBP14.59□□□□□ -0.07
CDRT1-207ENST00000583965 KIAA1551Q9HCM1 1747 aa14.58□□□□□ -0.07
CDRT1-207ENST00000583965 PDE6BP35913 854 aa14.58□□□□□ -0.08
CDRT1-207ENST00000583965 FOXO4P98177 505 aa14.58□□□□□ -0.08
CDRT1-207ENST00000583965 RABL6Q3YEC7 729 aaPredicted RBP14.58□□□□□ -0.08
CDRT1-207ENST00000583965 KLRG2A4D1S0 409 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms