RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 JDP2Q8WYK2 163 aa15.48■□□□□ 0.07
NUP85-224ENST00000583948 HIRAP54198 1017 aaPredicted RBP15.47■□□□□ 0.07
NUP85-224ENST00000583948 LARGE2Q8N3Y3 721 aa15.47■□□□□ 0.07
NUP85-224ENST00000583948 NIP7Q9Y221 180 aaKnown RBP eCLIP15.47■□□□□ 0.07
NUP85-224ENST00000583948 ABCC12Q96J65 1359 aa15.47■□□□□ 0.07
NUP85-224ENST00000583948 SIPA1L3O60292 1781 aaPredicted RBP15.47■□□□□ 0.07
NUP85-224ENST00000583948 BRPF1P55201 1214 aaPredicted RBP15.46■□□□□ 0.07
NUP85-224ENST00000583948 PRPF38BQ5VTL8 546 aaKnown RBP15.45■□□□□ 0.06
NUP85-224ENST00000583948 USP50Q70EL3 339 aaPredicted RBP15.45■□□□□ 0.06
NUP85-224ENST00000583948 NBPF26B4DH59 902 aa15.44■□□□□ 0.06
NUP85-224ENST00000583948 AOC3Q16853 763 aa15.44■□□□□ 0.06
NUP85-224ENST00000583948 NBPF10Q6P3W6 841 aaKnown RBP15.44■□□□□ 0.06
NUP85-224ENST00000583948 C3orf67Q6ZVT6 689 aa15.44■□□□□ 0.06
NUP85-224ENST00000583948 NBPF15Q8N660 670 aa15.44■□□□□ 0.06
NUP85-224ENST00000583948 TRPM4Q8TD43 1214 aa15.44■□□□□ 0.06
NUP85-224ENST00000583948 PSMD1Q99460 953 aa15.44■□□□□ 0.06
NUP85-224ENST00000583948 GPRC5DQ9NZD1 345 aa15.44■□□□□ 0.06
NUP85-224ENST00000583948 TRPA1O75762 1119 aa15.43■□□□□ 0.06
NUP85-224ENST00000583948 GMPSP49915 693 aaPredicted RBP15.43■□□□□ 0.06
NUP85-224ENST00000583948 TEFQ10587 303 aa15.43■□□□□ 0.06
NUP85-224ENST00000583948 CNGB1Q14028 1251 aaPredicted RBP15.43■□□□□ 0.06
NUP85-224ENST00000583948 NPM2Q86SE8 214 aaKnown RBP15.43■□□□□ 0.06
NUP85-224ENST00000583948 CA12O43570 354 aa15.42■□□□□ 0.06
NUP85-224ENST00000583948 CXCL9Q07325 125 aa15.42■□□□□ 0.06
NUP85-224ENST00000583948 TPTE2Q6XPS3 522 aa15.42■□□□□ 0.06
NUP85-224ENST00000583948 USP48Q86UV5 1035 aa15.42■□□□□ 0.06
NUP85-224ENST00000583948 NGEFQ8N5V2 710 aa15.42■□□□□ 0.06
NUP85-224ENST00000583948 FMNL2Q96PY5 1086 aa15.42■□□□□ 0.06
NUP85-224ENST00000583948 FAM155AB1AL88 458 aaPredicted RBP15.41■□□□□ 0.06
NUP85-224ENST00000583948 ALDH1B1P30837 517 aa15.41■□□□□ 0.06
NUP85-224ENST00000583948 HUNKP57058 714 aa15.41■□□□□ 0.06
NUP85-224ENST00000583948 KIF23Q02241 960 aaPredicted RBP15.41■□□□□ 0.06
NUP85-224ENST00000583948 TEX13AQ9BXU3 409 aaPredicted RBP15.41■□□□□ 0.06
NUP85-224ENST00000583948 ADARB2Q9NS39 739 aaKnown RBP15.41■□□□□ 0.06
NUP85-224ENST00000583948 MKI67P46013 3256 aaKnown RBP15.41■□□□□ 0.06
NUP85-224ENST00000583948 POLR2AP24928 1970 aaKnown RBP15.4■□□□□ 0.06
NUP85-224ENST00000583948 PPIP5K2O43314 1243 aa15.4■□□□□ 0.06
NUP85-224ENST00000583948 RAD17O75943 681 aa15.4■□□□□ 0.06
NUP85-224ENST00000583948 GTF2E1P29083 439 aaPredicted RBP15.4■□□□□ 0.06
NUP85-224ENST00000583948 NIM1KQ8IY84 436 aa15.4■□□□□ 0.06
NUP85-224ENST00000583948 RNF186Q9NXI6 227 aa15.4■□□□□ 0.06
NUP85-224ENST00000583948 NPC1L1Q9UHC9 1359 aa15.39■□□□□ 0.05
NUP85-224ENST00000583948 BTBD11A6QL63 1104 aa15.39■□□□□ 0.05
NUP85-224ENST00000583948 EGFRP00533 1210 aa15.38■□□□□ 0.05
NUP85-224ENST00000583948 GPTP24298 496 aa15.38■□□□□ 0.05
NUP85-224ENST00000583948 CRY2Q49AN0 593 aa15.38■□□□□ 0.05
NUP85-224ENST00000583948 CLEC4GQ6UXB4 293 aa15.38■□□□□ 0.05
NUP85-224ENST00000583948 GNAT3A8MTJ3 354 aa15.37■□□□□ 0.05
NUP85-224ENST00000583948 PPEF1O14829 653 aaPredicted RBP15.37■□□□□ 0.05
NUP85-224ENST00000583948 DDX10Q13206 875 aaKnown RBP15.37■□□□□ 0.05
NUP85-224ENST00000583948 PHACTR3Q96KR7 559 aa15.37■□□□□ 0.05
NUP85-224ENST00000583948 HPS5Q9UPZ3 1129 aa15.37■□□□□ 0.05
NUP85-224ENST00000583948 ADM5C9JUS6 153 aa15.36■□□□□ 0.05
NUP85-224ENST00000583948 NOGQ13253 232 aa15.36■□□□□ 0.05
NUP85-224ENST00000583948 RPGRQ92834 1020 aaKnown RBP15.36■□□□□ 0.05
NUP85-224ENST00000583948 ZNF428Q96B54 188 aa15.36■□□□□ 0.05
NUP85-224ENST00000583948 HHIPL1Q96JK4 782 aa15.36■□□□□ 0.05
NUP85-224ENST00000583948 PGAP2Q9UHJ9 254 aa15.36■□□□□ 0.05
NUP85-224ENST00000583948 ZNF652Q9Y2D9 606 aa15.36■□□□□ 0.05
NUP85-224ENST00000583948 ZBTB12Q9Y330 459 aaPredicted RBP15.36■□□□□ 0.05
NUP85-224ENST00000583948 U2SURPO15042 1029 aaKnown RBP15.35■□□□□ 0.05
NUP85-224ENST00000583948 DIAPH1O60610 1272 aaKnown RBP15.35■□□□□ 0.05
NUP85-224ENST00000583948 DCTN1Q14203 1278 aa15.35■□□□□ 0.05
NUP85-224ENST00000583948 SAMD7Q7Z3H4 446 aa15.35■□□□□ 0.05
NUP85-224ENST00000583948 MIS18AQ9NYP9 233 aa15.35■□□□□ 0.05
NUP85-224ENST00000583948 UBN2Q6ZU65 1347 aa15.35■□□□□ 0.05
NUP85-224ENST00000583948 TAF1P21675 1872 aa15.35■□□□□ 0.05
NUP85-224ENST00000583948 AKAP11Q9UKA4 1901 aa15.35■□□□□ 0.05
NUP85-224ENST00000583948 NUP98P52948 1817 aa15.34■□□□□ 0.05
NUP85-224ENST00000583948 YDJCA8MPS7 323 aa15.34■□□□□ 0.05
NUP85-224ENST00000583948 SUSD4Q5VX71 490 aa15.34■□□□□ 0.05
NUP85-224ENST00000583948 RGMBQ6NW40 437 aa15.34■□□□□ 0.05
NUP85-224ENST00000583948 TTLL7Q6ZT98 887 aa15.34■□□□□ 0.05
NUP85-224ENST00000583948 MCM10Q7L590 875 aa15.34■□□□□ 0.05
NUP85-224ENST00000583948 CSRNP1Q96S65 589 aa15.34■□□□□ 0.05
NUP85-224ENST00000583948 BCL2L13Q9BXK5 485 aa15.34■□□□□ 0.05
NUP85-224ENST00000583948 ASTN2O75129 1339 aaPredicted RBP15.34■□□□□ 0.05
NUP85-224ENST00000583948 ZNF157P51786 506 aaPredicted RBP15.33■□□□□ 0.04
NUP85-224ENST00000583948 TBC1D10BQ4KMP7 808 aaPredicted RBP15.33■□□□□ 0.04
NUP85-224ENST00000583948 AMER1Q5JTC6 1135 aaPredicted RBP15.33■□□□□ 0.04
NUP85-224ENST00000583948 HABP4Q5JVS0 413 aaKnown RBP15.33■□□□□ 0.04
NUP85-224ENST00000583948 RBM26Q5T8P6 1007 aaKnown RBP15.33■□□□□ 0.04
NUP85-224ENST00000583948 CDC37L1Q7L3B6 337 aa15.33■□□□□ 0.04
NUP85-224ENST00000583948 CTU1Q7Z7A3 348 aaKnown RBP15.33■□□□□ 0.04
NUP85-224ENST00000583948 CNOT7Q9UIV1 285 aaKnown RBP15.33■□□□□ 0.04
NUP85-224ENST00000583948 ZNRF3Q9ULT6 936 aa15.33■□□□□ 0.04
NUP85-224ENST00000583948 HOXA10P31260 410 aaPredicted RBP15.32■□□□□ 0.04
NUP85-224ENST00000583948 CC2D1BQ5T0F9 858 aaKnown RBP15.32■□□□□ 0.04
NUP85-224ENST00000583948 SCAF8Q9UPN6 1271 aaKnown RBP15.32■□□□□ 0.04
NUP85-224ENST00000583948 KNSTRNQ9Y448 316 aa15.32■□□□□ 0.04
NUP85-224ENST00000583948 KIF7Q2M1P5 1343 aa15.32■□□□□ 0.04
NUP85-224ENST00000583948 TBC1D8O95759 1140 aa15.31■□□□□ 0.04
NUP85-224ENST00000583948 SNRPA1P09661 255 aaKnown RBP15.31■□□□□ 0.04
NUP85-224ENST00000583948 MICALL2Q8IY33 904 aa15.31■□□□□ 0.04
NUP85-224ENST00000583948 ZBTB3Q9H5J0 574 aa15.31■□□□□ 0.04
NUP85-224ENST00000583948 GBA2Q9HCG7 927 aaPredicted RBP15.31■□□□□ 0.04
NUP85-224ENST00000583948 KCNQ5Q9NR82 932 aa15.31■□□□□ 0.04
NUP85-224ENST00000583948 CEMIPQ8WUJ3 1361 aa15.31■□□□□ 0.04
NUP85-224ENST00000583948 CENPFP49454 3210 aa15.3■□□□□ 0.04
NUP85-224ENST00000583948 CC2D2BQ6DHV5 1058 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms