RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 IRX6P78412 446 aaPredicted RBP11.54□□□□□ -0.56
CASC3-209ENST00000583902 GCKRQ14397 625 aa11.54□□□□□ -0.56
CASC3-209ENST00000583902 PTF1AQ7RTS3 328 aa11.54□□□□□ -0.56
CASC3-209ENST00000583902 ISCA1Q9BUE6 129 aa11.54□□□□□ -0.56
CASC3-209ENST00000583902 USP44Q9H0E7 712 aa11.54□□□□□ -0.56
CASC3-209ENST00000583902 CWC25Q9NXE8 425 aaPredicted RBP11.54□□□□□ -0.56
CASC3-209ENST00000583902 GRM8O00222 908 aa11.53□□□□□ -0.56
CASC3-209ENST00000583902 GNPATO15228 680 aa11.53□□□□□ -0.56
CASC3-209ENST00000583902 TTLL7Q6ZT98 887 aa11.53□□□□□ -0.56
CASC3-209ENST00000583902 CENPQQ7L2Z9 268 aaPredicted RBP11.53□□□□□ -0.56
CASC3-209ENST00000583902 MYD88Q99836 296 aa11.53□□□□□ -0.56
CASC3-209ENST00000583902 SCN7AQ01118 1682 aa11.52□□□□□ -0.56
CASC3-209ENST00000583902 CAMTA2O94983 1202 aa11.52□□□□□ -0.57
CASC3-209ENST00000583902 IGKV5-2P06315 115 aa11.52□□□□□ -0.57
CASC3-209ENST00000583902 RFC4P35249 363 aa11.52□□□□□ -0.57
CASC3-209ENST00000583902 PPP1R42Q7Z4L9 355 aa11.52□□□□□ -0.57
CASC3-209ENST00000583902 ZNF34Q8IZ26 560 aa11.52□□□□□ -0.57
CASC3-209ENST00000583902 CAMKK2Q96RR4 588 aa11.52□□□□□ -0.57
CASC3-209ENST00000583902 LRRC4BQ9NT99 713 aa11.52□□□□□ -0.57
CASC3-209ENST00000583902 CDHR2Q9BYE9 1310 aa11.52□□□□□ -0.57
CASC3-209ENST00000583902 H7C1W4 665 aa11.51□□□□□ -0.57
CASC3-209ENST00000583902 PCCAP05165 728 aaPredicted RBP11.51□□□□□ -0.57
CASC3-209ENST00000583902 MTX1Q13505 466 aa11.51□□□□□ -0.57
CASC3-209ENST00000583902 PELP1Q8IZL8 1130 aaKnown RBP11.51□□□□□ -0.57
CASC3-209ENST00000583902 PROM2Q8N271 834 aa11.51□□□□□ -0.57
CASC3-209ENST00000583902 ANKRD44Q8N8A2 993 aa11.51□□□□□ -0.57
CASC3-209ENST00000583902 ZBTB38Q8NAP3 1195 aaPredicted RBP11.51□□□□□ -0.57
CASC3-209ENST00000583902 GCC1Q96CN9 775 aa11.51□□□□□ -0.57
CASC3-209ENST00000583902 PLA2G12BQ9BX93 195 aa11.51□□□□□ -0.57
CASC3-209ENST00000583902 NYXQ9GZU5 481 aa11.51□□□□□ -0.57
CASC3-209ENST00000583902 ZBTB3Q9H5J0 574 aa11.51□□□□□ -0.57
CASC3-209ENST00000583902 TNNQ9UQP3 1299 aa11.51□□□□□ -0.57
CASC3-209ENST00000583902 ZNF330Q9Y3S2 320 aaPredicted RBP11.51□□□□□ -0.57
CASC3-209ENST00000583902 PRR29P0C7W0 189 aa11.5□□□□□ -0.57
CASC3-209ENST00000583902 PIP4K2AP48426 406 aaPredicted RBP11.5□□□□□ -0.57
CASC3-209ENST00000583902 HSP90AB4PQ58FF6 505 aa11.5□□□□□ -0.57
CASC3-209ENST00000583902 ARXQ96QS3 562 aa11.5□□□□□ -0.57
CASC3-209ENST00000583902 MEIS3Q99687 375 aa11.5□□□□□ -0.57
CASC3-209ENST00000583902 TBC1D2BQ9UPU7 963 aa11.5□□□□□ -0.57
CASC3-209ENST00000583902 USP42Q9H9J4 1324 aaKnown RBP11.5□□□□□ -0.57
CASC3-209ENST00000583902 ATP8B2P98198 1209 aa11.49□□□□□ -0.57
CASC3-209ENST00000583902 NLRP10Q86W26 655 aa11.49□□□□□ -0.57
CASC3-209ENST00000583902 ARHGEF1Q92888 912 aaKnown RBP11.49□□□□□ -0.57
CASC3-209ENST00000583902 STK32BQ9NY57 414 aa11.49□□□□□ -0.57
CASC3-209ENST00000583902 TFCP2L1Q9NZI6 479 aa11.49□□□□□ -0.57
CASC3-209ENST00000583902 C4AP0C0L4 1744 aa11.49□□□□□ -0.57
CASC3-209ENST00000583902 MYH3P11055 1940 aa11.48□□□□□ -0.57
CASC3-209ENST00000583902 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.48□□□□□ -0.57
CASC3-209ENST00000583902 CWF19L2Q2TBE0 894 aaKnown RBP11.48□□□□□ -0.57
CASC3-209ENST00000583902 CEP85Q6P2H3 762 aa11.48□□□□□ -0.57
CASC3-209ENST00000583902 NLGN1Q8N2Q7 840 aa11.48□□□□□ -0.57
CASC3-209ENST00000583902 SETDB2Q96T68 719 aa11.48□□□□□ -0.57
CASC3-209ENST00000583902 UTP14AQ9BVJ6 771 aaKnown RBP11.48□□□□□ -0.57
CASC3-209ENST00000583902 FBXO3Q9UK99 471 aa11.48□□□□□ -0.57
CASC3-209ENST00000583902 SH3TC1Q8TE82 1336 aa11.47□□□□□ -0.57
CASC3-209ENST00000583902 NBPF7P0C2Y1 421 aaPredicted RBP11.47□□□□□ -0.57
CASC3-209ENST00000583902 CASP7P55210 303 aa11.47□□□□□ -0.57
CASC3-209ENST00000583902 RABL6Q3YEC7 729 aaPredicted RBP11.47□□□□□ -0.57
CASC3-209ENST00000583902 TPTE2Q6XPS3 522 aa11.47□□□□□ -0.57
CASC3-209ENST00000583902 SSH3Q8TE77 659 aa11.47□□□□□ -0.57
CASC3-209ENST00000583902 SLC16A10Q8TF71 515 aa11.47□□□□□ -0.57
CASC3-209ENST00000583902 NIP7Q9Y221 180 aaKnown RBP eCLIP11.47□□□□□ -0.57
CASC3-209ENST00000583902 PCDHB15Q9Y5E8 787 aa11.47□□□□□ -0.57
CASC3-209ENST00000583902 LRRFIP2Q9Y608 721 aaKnown RBP11.47□□□□□ -0.57
CASC3-209ENST00000583902 COL24A1Q17RW2 1714 aa11.46□□□□□ -0.57
CASC3-209ENST00000583902 CARMIL3Q8ND23 1372 aa11.46□□□□□ -0.57
CASC3-209ENST00000583902 KDM2BQ8NHM5 1336 aa11.46□□□□□ -0.57
CASC3-209ENST00000583902 ATP5J2-PTCD1G3V325 749 aa11.46□□□□□ -0.57
CASC3-209ENST00000583902 RAB11FIP3O75154 756 aa11.46□□□□□ -0.57
CASC3-209ENST00000583902 EN1Q05925 392 aaPredicted RBP11.46□□□□□ -0.57
CASC3-209ENST00000583902 SLC15A2Q16348 729 aa11.46□□□□□ -0.57
CASC3-209ENST00000583902 HLFQ16534 295 aa11.46□□□□□ -0.57
CASC3-209ENST00000583902 UBE3BQ7Z3V4 1068 aa11.46□□□□□ -0.57
CASC3-209ENST00000583902 SMC5Q8IY18 1101 aa11.46□□□□□ -0.57
CASC3-209ENST00000583902 DCTPP1Q9H773 170 aa11.46□□□□□ -0.57
CASC3-209ENST00000583902 ZBTB47Q9UFB7 747 aaPredicted RBP11.46□□□□□ -0.57
CASC3-209ENST00000583902 LAMB2P55268 1798 aa11.46□□□□□ -0.58
CASC3-209ENST00000583902 RIC1Q4ADV7 1423 aa11.45□□□□□ -0.58
CASC3-209ENST00000583902 PRKAR2AP13861 404 aaKnown RBP11.45□□□□□ -0.58
CASC3-209ENST00000583902 SLC10A5Q5PT55 438 aa11.45□□□□□ -0.58
CASC3-209ENST00000583902 USPL1Q5W0Q7 1092 aa11.45□□□□□ -0.58
CASC3-209ENST00000583902 ERC1Q8IUD2 1116 aa11.45□□□□□ -0.58
CASC3-209ENST00000583902 TRMT112Q9UI30 125 aaKnown RBP11.45□□□□□ -0.58
CASC3-209ENST00000583902 RTL9Q8NET4 1388 aa11.44□□□□□ -0.58
CASC3-209ENST00000583902 PDE8AO60658 829 aa11.44□□□□□ -0.58
CASC3-209ENST00000583902 KCNQ4P56696 695 aa11.44□□□□□ -0.58
CASC3-209ENST00000583902 EZH2Q15910 746 aaKnown RBP11.44□□□□□ -0.58
CASC3-209ENST00000583902 B4GALNT3Q6L9W6 998 aa11.44□□□□□ -0.58
CASC3-209ENST00000583902 PDZRN3Q9UPQ7 1066 aa11.44□□□□□ -0.58
CASC3-209ENST00000583902 NOP58Q9Y2X3 529 aaKnown RBP11.44□□□□□ -0.58
CASC3-209ENST00000583902 SRGAP3O43295 1099 aa11.43□□□□□ -0.58
CASC3-209ENST00000583902 CSF1RP07333 972 aa11.43□□□□□ -0.58
CASC3-209ENST00000583902 GYS1P13807 737 aa11.43□□□□□ -0.58
CASC3-209ENST00000583902 SUCLG2Q96I99 432 aa11.43□□□□□ -0.58
CASC3-209ENST00000583902 BCL2L12Q9HB09 334 aa11.43□□□□□ -0.58
CASC3-209ENST00000583902 TUBGCP6Q96RT7 1819 aa11.43□□□□□ -0.58
CASC3-209ENST00000583902 UBN2Q6ZU65 1347 aa11.42□□□□□ -0.58
CASC3-209ENST00000583902 IRS4O14654 1257 aaPredicted RBP11.42□□□□□ -0.58
CASC3-209ENST00000583902 PHF14O94880 888 aa11.42□□□□□ -0.58
CASC3-209ENST00000583902 NTSR2O95665 410 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms