RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 CCDC191Q8NCU4 936 aa13.83□□□□□ -0.2
TOP3A-216ENST00000583804 CWC25Q9NXE8 425 aaPredicted RBP13.83□□□□□ -0.2
TOP3A-216ENST00000583804 PARP3Q9Y6F1 533 aa13.83□□□□□ -0.2
TOP3A-216ENST00000583804 ATP10DQ9P241 1426 aa13.83□□□□□ -0.2
TOP3A-216ENST00000583804 BCORQ6W2J9 1755 aa13.83□□□□□ -0.2
TOP3A-216ENST00000583804 ARFGEF2Q9Y6D5 1785 aa13.83□□□□□ -0.2
TOP3A-216ENST00000583804 UBN2Q6ZU65 1347 aa13.82□□□□□ -0.2
TOP3A-216ENST00000583804 NUP98P52948 1817 aa13.82□□□□□ -0.2
TOP3A-216ENST00000583804 ALDH1L1O75891 902 aa13.82□□□□□ -0.2
TOP3A-216ENST00000583804 POLD1P28340 1107 aa13.82□□□□□ -0.2
TOP3A-216ENST00000583804 GTF2E1P29083 439 aaPredicted RBP13.82□□□□□ -0.2
TOP3A-216ENST00000583804 DDR1Q08345 913 aa13.82□□□□□ -0.2
TOP3A-216ENST00000583804 PPP1R42Q7Z4L9 355 aa13.82□□□□□ -0.2
TOP3A-216ENST00000583804 NBPF5PQ86XG9 351 aaPredicted RBP13.82□□□□□ -0.2
TOP3A-216ENST00000583804 JARID2Q92833 1246 aaPredicted RBP13.82□□□□□ -0.2
TOP3A-216ENST00000583804 SERPINB2P05120 415 aa13.81□□□□□ -0.2
TOP3A-216ENST00000583804 PDE3AQ14432 1141 aa13.81□□□□□ -0.2
TOP3A-216ENST00000583804 RTL5Q5HYW3 569 aaPredicted RBP13.81□□□□□ -0.2
TOP3A-216ENST00000583804 INTS3Q68E01 1043 aaKnown RBP13.81□□□□□ -0.2
TOP3A-216ENST00000583804 UTP14AQ9BVJ6 771 aaKnown RBP13.81□□□□□ -0.2
TOP3A-216ENST00000583804 C9orf78Q9NZ63 289 aaPredicted RBP13.81□□□□□ -0.2
TOP3A-216ENST00000583804 TRMT112Q9UI30 125 aaKnown RBP13.81□□□□□ -0.2
TOP3A-216ENST00000583804 CARMIL3Q8ND23 1372 aa13.81□□□□□ -0.2
TOP3A-216ENST00000583804 CASZ1Q86V15 1759 aa13.81□□□□□ -0.2
TOP3A-216ENST00000583804 POLRMTO00411 1230 aaKnown RBP13.8□□□□□ -0.2
TOP3A-216ENST00000583804 GCKRQ14397 625 aa13.8□□□□□ -0.2
TOP3A-216ENST00000583804 TPTE2Q6XPS3 522 aa13.8□□□□□ -0.2
TOP3A-216ENST00000583804 NYXQ9GZU5 481 aa13.8□□□□□ -0.2
TOP3A-216ENST00000583804 NUTM1Q86Y26 1132 aa13.8□□□□□ -0.2
TOP3A-216ENST00000583804 CCDC24Q8N4L8 307 aa13.8□□□□□ -0.2
TOP3A-216ENST00000583804 FAM89AQ96GI7 184 aa13.8□□□□□ -0.2
TOP3A-216ENST00000583804 SPON1Q9HCB6 807 aa13.8□□□□□ -0.2
TOP3A-216ENST00000583804 PXDNLA1KZ92 1463 aa13.79□□□□□ -0.2
TOP3A-216ENST00000583804 GRM8O00222 908 aa13.79□□□□□ -0.2
TOP3A-216ENST00000583804 NTSR2O95665 410 aa13.79□□□□□ -0.2
TOP3A-216ENST00000583804 UBE3BQ7Z3V4 1068 aa13.79□□□□□ -0.2
TOP3A-216ENST00000583804 SYNE4Q8N205 404 aa13.79□□□□□ -0.2
TOP3A-216ENST00000583804 CNBD1Q8NA66 436 aa13.79□□□□□ -0.2
TOP3A-216ENST00000583804 ZBTB38Q8NAP3 1195 aaPredicted RBP13.79□□□□□ -0.2
TOP3A-216ENST00000583804 SH3TC1Q8TE82 1336 aa13.78□□□□□ -0.2
TOP3A-216ENST00000583804 ST5P78524 1137 aa13.78□□□□□ -0.2
TOP3A-216ENST00000583804 MVPQ14764 893 aaKnown RBP13.78□□□□□ -0.2
TOP3A-216ENST00000583804 ERFEQ4G0M1 354 aa13.78□□□□□ -0.2
TOP3A-216ENST00000583804 B4GALNT3Q6L9W6 998 aa13.78□□□□□ -0.2
TOP3A-216ENST00000583804 PRR5LQ6MZQ0 368 aa13.78□□□□□ -0.2
TOP3A-216ENST00000583804 USP44Q9H0E7 712 aa13.78□□□□□ -0.2
TOP3A-216ENST00000583804 ANKRD36CQ5JPF3 1778 aa13.78□□□□□ -0.2
TOP3A-216ENST00000583804 H7C1W4 665 aa13.77□□□□□ -0.21
TOP3A-216ENST00000583804 PCCAP05165 728 aaPredicted RBP13.77□□□□□ -0.21
TOP3A-216ENST00000583804 C1orf115Q9H7X2 142 aa13.77□□□□□ -0.21
TOP3A-216ENST00000583804 AFDNP55196 1824 aaKnown RBP13.76□□□□□ -0.21
TOP3A-216ENST00000583804 IRS4O14654 1257 aaPredicted RBP13.76□□□□□ -0.21
TOP3A-216ENST00000583804 NBPF7P0C2Y1 421 aaPredicted RBP13.76□□□□□ -0.21
TOP3A-216ENST00000583804 HCLS1P14317 486 aaPredicted RBP13.76□□□□□ -0.21
TOP3A-216ENST00000583804 PTGER2P43116 358 aa13.76□□□□□ -0.21
TOP3A-216ENST00000583804 MEIS3Q99687 375 aa13.76□□□□□ -0.21
TOP3A-216ENST00000583804 DDX19BQ9UMR2 479 aa13.76□□□□□ -0.21
TOP3A-216ENST00000583804 GNAI3P08754 354 aa13.75□□□□□ -0.21
TOP3A-216ENST00000583804 UBTFL1P0CB47 393 aaPredicted RBP13.75□□□□□ -0.21
TOP3A-216ENST00000583804 KLHL34Q8N239 644 aa13.75□□□□□ -0.21
TOP3A-216ENST00000583804 SGIP1Q9BQI5 828 aa13.75□□□□□ -0.21
TOP3A-216ENST00000583804 PPP1R1BQ9UD71 204 aaPredicted RBP13.75□□□□□ -0.21
TOP3A-216ENST00000583804 LRP5O75197 1615 aa13.75□□□□□ -0.21
TOP3A-216ENST00000583804 IBTKQ9P2D0 1353 aaPredicted RBP13.75□□□□□ -0.21
TOP3A-216ENST00000583804 ZBTB7BO15156 539 aaPredicted RBP13.74□□□□□ -0.21
TOP3A-216ENST00000583804 HSP90B1P14625 803 aaKnown RBP13.74□□□□□ -0.21
TOP3A-216ENST00000583804 CHMP4BQ9H444 224 aaKnown RBP13.74□□□□□ -0.21
TOP3A-216ENST00000583804 COL24A1Q17RW2 1714 aa13.74□□□□□ -0.21
TOP3A-216ENST00000583804 CASP7P55210 303 aa13.74□□□□□ -0.21
TOP3A-216ENST00000583804 SLC10A5Q5PT55 438 aa13.74□□□□□ -0.21
TOP3A-216ENST00000583804 SUCLG2Q96I99 432 aa13.74□□□□□ -0.21
TOP3A-216ENST00000583804 HDAC5Q9UQL6 1122 aa13.74□□□□□ -0.21
TOP3A-216ENST00000583804 UTYO14607 1347 aa13.73□□□□□ -0.21
TOP3A-216ENST00000583804 CDHR2Q9BYE9 1310 aa13.73□□□□□ -0.21
TOP3A-216ENST00000583804 ABCC12Q96J65 1359 aa13.73□□□□□ -0.21
TOP3A-216ENST00000583804 GNAI2P04899 355 aa13.73□□□□□ -0.21
TOP3A-216ENST00000583804 NLRP3Q96P20 1036 aa13.73□□□□□ -0.21
TOP3A-216ENST00000583804 BRIP1Q9BX63 1249 aa13.73□□□□□ -0.21
TOP3A-216ENST00000583804 PPP4R2Q9NY27 417 aa13.73□□□□□ -0.21
TOP3A-216ENST00000583804 LRRFIP2Q9Y608 721 aaKnown RBP13.73□□□□□ -0.21
TOP3A-216ENST00000583804 PDE8AO60658 829 aa13.72□□□□□ -0.21
TOP3A-216ENST00000583804 PDE6BP35913 854 aa13.72□□□□□ -0.21
TOP3A-216ENST00000583804 CCDC136Q96JN2 1154 aa13.72□□□□□ -0.21
TOP3A-216ENST00000583804 CCDC85AQ96PX6 553 aaPredicted RBP13.72□□□□□ -0.21
TOP3A-216ENST00000583804 CHMP3Q9Y3E7 222 aa13.72□□□□□ -0.21
TOP3A-216ENST00000583804 EPHA10Q5JZY3 1008 aa13.71□□□□□ -0.21
TOP3A-216ENST00000583804 N4BP2Q86UW6 1770 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-216ENST00000583804 FOXO4P98177 505 aa13.7□□□□□ -0.22
TOP3A-216ENST00000583804 ERICH6BQ5W0A0 696 aa13.7□□□□□ -0.22
TOP3A-216ENST00000583804 C3orf67Q6ZVT6 689 aa13.7□□□□□ -0.22
TOP3A-216ENST00000583804 KAZALD1Q96I82 304 aa13.7□□□□□ -0.22
TOP3A-216ENST00000583804 PLA2G12BQ9BX93 195 aa13.7□□□□□ -0.22
TOP3A-216ENST00000583804 BICC1Q9H694 974 aaKnown RBP13.7□□□□□ -0.22
TOP3A-216ENST00000583804 ZBTB40Q9NUA8 1239 aa13.7□□□□□ -0.22
TOP3A-216ENST00000583804 H0YIN7 160 aa13.69□□□□□ -0.22
TOP3A-216ENST00000583804 CTSWP56202 376 aa13.69□□□□□ -0.22
TOP3A-216ENST00000583804 LMBR1LQ6UX01 489 aa13.69□□□□□ -0.22
TOP3A-216ENST00000583804 C2CD5Q86YS7 1000 aa13.69□□□□□ -0.22
TOP3A-216ENST00000583804 PCDHB15Q9Y5E8 787 aa13.69□□□□□ -0.22
TOP3A-216ENST00000583804 NRXN2Q9P2S2 1712 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms