RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 CASP7P55210 303 aa18.25■□□□□ 0.51
SENP3-208ENST00000583277 SF3B2Q13435 895 aaKnown RBP18.25■□□□□ 0.51
SENP3-208ENST00000583277 TRAPPC3LQ5T215 181 aa18.25■□□□□ 0.51
SENP3-208ENST00000583277 SUCLG2Q96I99 432 aa18.25■□□□□ 0.51
SENP3-208ENST00000583277 GPTP24298 496 aa18.25■□□□□ 0.51
SENP3-208ENST00000583277 ZBTB38Q8NAP3 1195 aaPredicted RBP18.25■□□□□ 0.51
SENP3-208ENST00000583277 MYH3P11055 1940 aa18.25■□□□□ 0.51
SENP3-208ENST00000583277 COL24A1Q17RW2 1714 aa18.24■□□□□ 0.51
SENP3-208ENST00000583277 TUBGCP6Q96RT7 1819 aa18.24■□□□□ 0.51
SENP3-208ENST00000583277 RFC4P35249 363 aa18.24■□□□□ 0.51
SENP3-208ENST00000583277 PPP1R42Q7Z4L9 355 aa18.24■□□□□ 0.51
SENP3-208ENST00000583277 SSH3Q8TE77 659 aa18.24■□□□□ 0.51
SENP3-208ENST00000583277 BICC1Q9H694 974 aaKnown RBP18.24■□□□□ 0.51
SENP3-208ENST00000583277 DCTPP1Q9H773 170 aa18.24■□□□□ 0.51
SENP3-208ENST00000583277 UBN2Q6ZU65 1347 aa18.24■□□□□ 0.51
SENP3-208ENST00000583277 USP42Q9H9J4 1324 aaKnown RBP18.24■□□□□ 0.51
SENP3-208ENST00000583277 LAMB2P55268 1798 aa18.24■□□□□ 0.51
SENP3-208ENST00000583277 SRGAP3O43295 1099 aa18.23■□□□□ 0.51
SENP3-208ENST00000583277 POLA2Q14181 598 aa18.23■□□□□ 0.51
SENP3-208ENST00000583277 ARHGEF1Q92888 912 aaKnown RBP18.23■□□□□ 0.51
SENP3-208ENST00000583277 CDHR2Q9BYE9 1310 aa18.23■□□□□ 0.51
SENP3-208ENST00000583277 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.22■□□□□ 0.51
SENP3-208ENST00000583277 PNMA6EA0A0J9YXQ4 647 aa18.22■□□□□ 0.51
SENP3-208ENST00000583277 PHF14O94880 888 aa18.22■□□□□ 0.51
SENP3-208ENST00000583277 BAG6P46379 1132 aa18.22■□□□□ 0.51
SENP3-208ENST00000583277 KAZALD1Q96I82 304 aa18.22■□□□□ 0.51
SENP3-208ENST00000583277 NIP7Q9Y221 180 aaKnown RBP eCLIP18.22■□□□□ 0.51
SENP3-208ENST00000583277 RABL6Q3YEC7 729 aaPredicted RBP18.21■□□□□ 0.51
SENP3-208ENST00000583277 USPL1Q5W0Q7 1092 aa18.21■□□□□ 0.51
SENP3-208ENST00000583277 AMIGO3Q86WK7 504 aa18.21■□□□□ 0.51
SENP3-208ENST00000583277 QSER1Q2KHR3 1735 aa18.21■□□□□ 0.51
SENP3-208ENST00000583277 CAMKK2Q96RR4 588 aa18.21■□□□□ 0.51
SENP3-208ENST00000583277 PLA2G12BQ9BX93 195 aa18.21■□□□□ 0.51
SENP3-208ENST00000583277 TRMT112Q9UI30 125 aaKnown RBP18.21■□□□□ 0.51
SENP3-208ENST00000583277 HSP90B1P14625 803 aaKnown RBP18.2■□□□□ 0.5
SENP3-208ENST00000583277 NUCB1Q02818 461 aa18.2■□□□□ 0.5
SENP3-208ENST00000583277 CCDC125Q86Z20 511 aa18.2■□□□□ 0.5
SENP3-208ENST00000583277 FLAD1Q8NFF5 587 aa18.2■□□□□ 0.5
SENP3-208ENST00000583277 AKT1S1Q96B36 256 aa18.2■□□□□ 0.5
SENP3-208ENST00000583277 UTP14AQ9BVJ6 771 aaKnown RBP18.2■□□□□ 0.5
SENP3-208ENST00000583277 SRP68Q9UHB9 627 aaKnown RBP18.2■□□□□ 0.5
SENP3-208ENST00000583277 PDZRN3Q9UPQ7 1066 aa18.2■□□□□ 0.5
SENP3-208ENST00000583277 JARID2Q92833 1246 aaPredicted RBP18.19■□□□□ 0.5
SENP3-208ENST00000583277 FAM89AQ96GI7 184 aa18.19■□□□□ 0.5
SENP3-208ENST00000583277 BCL2L12Q9HB09 334 aa18.19■□□□□ 0.5
SENP3-208ENST00000583277 TFCP2L1Q9NZI6 479 aa18.19■□□□□ 0.5
SENP3-208ENST00000583277 ZBTB47Q9UFB7 747 aaPredicted RBP18.19■□□□□ 0.5
SENP3-208ENST00000583277 SH3TC1Q8TE82 1336 aa18.19■□□□□ 0.5
SENP3-208ENST00000583277 EN1Q05925 392 aaPredicted RBP18.18■□□□□ 0.5
SENP3-208ENST00000583277 ZNF827Q17R98 1081 aa18.18■□□□□ 0.5
SENP3-208ENST00000583277 HSP90AB4PQ58FF6 505 aa18.18■□□□□ 0.5
SENP3-208ENST00000583277 EPHA10Q5JZY3 1008 aa18.18■□□□□ 0.5
SENP3-208ENST00000583277 SMIM5Q71RC9 77 aa18.18■□□□□ 0.5
SENP3-208ENST00000583277 DDX60Q8IY21 1712 aaKnown RBP18.18■□□□□ 0.5
SENP3-208ENST00000583277 FOXO4P98177 505 aa18.17■□□□□ 0.5
SENP3-208ENST00000583277 RTL5Q5HYW3 569 aaPredicted RBP18.17■□□□□ 0.5
SENP3-208ENST00000583277 SUSD4Q5VX71 490 aa18.17■□□□□ 0.5
SENP3-208ENST00000583277 SETDB2Q96T68 719 aa18.17■□□□□ 0.5
SENP3-208ENST00000583277 IRS4O14654 1257 aaPredicted RBP18.17■□□□□ 0.5
SENP3-208ENST00000583277 NTSR2O95665 410 aa18.17■□□□□ 0.5
SENP3-208ENST00000583277 EZH2Q15910 746 aaKnown RBP18.17■□□□□ 0.5
SENP3-208ENST00000583277 ANKRD45Q5TZF3 282 aa18.17■□□□□ 0.5
SENP3-208ENST00000583277 TBC1D9BQ66K14 1250 aa18.17■□□□□ 0.5
SENP3-208ENST00000583277 CHD1LQ86WJ1 897 aa18.17■□□□□ 0.5
SENP3-208ENST00000583277 NYXQ9GZU5 481 aa18.17■□□□□ 0.5
SENP3-208ENST00000583277 CARMIL3Q8ND23 1372 aa18.16■□□□□ 0.5
SENP3-208ENST00000583277 RAB11FIP3O75154 756 aa18.16■□□□□ 0.5
SENP3-208ENST00000583277 LMBR1LQ6UX01 489 aa18.16■□□□□ 0.5
SENP3-208ENST00000583277 EXOC6BQ9Y2D4 811 aa18.16■□□□□ 0.5
SENP3-208ENST00000583277 NOP58Q9Y2X3 529 aaKnown RBP18.16■□□□□ 0.5
SENP3-208ENST00000583277 PDE8AO60658 829 aa18.15■□□□□ 0.5
SENP3-208ENST00000583277 SURF6O75683 361 aaKnown RBP18.15■□□□□ 0.5
SENP3-208ENST00000583277 CTSWP56202 376 aa18.14■□□□□ 0.49
SENP3-208ENST00000583277 ERC1Q8IUD2 1116 aa18.14■□□□□ 0.49
SENP3-208ENST00000583277 CHMP3Q9Y3E7 222 aa18.14■□□□□ 0.49
SENP3-208ENST00000583277 GYS1P13807 737 aa18.13■□□□□ 0.49
SENP3-208ENST00000583277 BICDL1Q6ZP65 573 aa18.13■□□□□ 0.49
SENP3-208ENST00000583277 LRRCC1Q9C099 1032 aa18.13■□□□□ 0.49
SENP3-208ENST00000583277 LNPKQ9C0E8 428 aa18.13■□□□□ 0.49
SENP3-208ENST00000583277 COPRSQ9NQ92 184 aa18.13■□□□□ 0.49
SENP3-208ENST00000583277 STK32BQ9NY57 414 aa18.13■□□□□ 0.49
SENP3-208ENST00000583277 CSF1RP07333 972 aa18.13■□□□□ 0.49
SENP3-208ENST00000583277 OS9Q13438 667 aaPredicted RBP18.13■□□□□ 0.49
SENP3-208ENST00000583277 NBPF5PQ86XG9 351 aaPredicted RBP18.13■□□□□ 0.49
SENP3-208ENST00000583277 CASZ1Q86V15 1759 aa18.13■□□□□ 0.49
SENP3-208ENST00000583277 FAM177BA6PVY3 158 aa18.12■□□□□ 0.49
SENP3-208ENST00000583277 RFX5P48382 616 aaPredicted RBP18.12■□□□□ 0.49
SENP3-208ENST00000583277 RGS3P49796 1198 aa18.12■□□□□ 0.49
SENP3-208ENST00000583277 SYNE4Q8N205 404 aa18.12■□□□□ 0.49
SENP3-208ENST00000583277 KIF1BPQ96EK5 621 aa18.12■□□□□ 0.49
SENP3-208ENST00000583277 NFIXQ14938 502 aa18.11■□□□□ 0.49
SENP3-208ENST00000583277 SLC15A2Q16348 729 aa18.11■□□□□ 0.49
SENP3-208ENST00000583277 CCDC57Q2TAC2 916 aa18.11■□□□□ 0.49
SENP3-208ENST00000583277 TPTE2Q6XPS3 522 aa18.11■□□□□ 0.49
SENP3-208ENST00000583277 DEFB132Q7Z7B7 95 aa18.11■□□□□ 0.49
SENP3-208ENST00000583277 PNPLA7Q6ZV29 1317 aa18.1■□□□□ 0.49
SENP3-208ENST00000583277 APBB1O00213 710 aa18.1■□□□□ 0.49
SENP3-208ENST00000583277 GTF2E1P29083 439 aaPredicted RBP18.1■□□□□ 0.49
SENP3-208ENST00000583277 PTPN12Q05209 780 aaKnown RBP18.1■□□□□ 0.49
SENP3-208ENST00000583277 G3BP1Q13283 466 aaKnown RBP eCLIP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms