RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 USPL1Q5W0Q7 1092 aa15.08■□□□□ 0
CCDC57-216ENST00000582885 NLRP10Q86W26 655 aa15.08■□□□□ 0
CCDC57-216ENST00000582885 BCL2L12Q9HB09 334 aa15.08■□□□□ 0
CCDC57-216ENST00000582885 STK32BQ9NY57 414 aa15.08■□□□□ 0
CCDC57-216ENST00000582885 PHF14O94880 888 aa15.07■□□□□ 0
CCDC57-216ENST00000582885 NBPF7P0C2Y1 421 aaPredicted RBP15.07■□□□□ 0
CCDC57-216ENST00000582885 PCCAP05165 728 aaPredicted RBP15.06■□□□□ 0
CCDC57-216ENST00000582885 CASP7P55210 303 aa15.06■□□□□ 0
CCDC57-216ENST00000582885 SMIM5Q71RC9 77 aa15.06■□□□□ 0
CCDC57-216ENST00000582885 RPAP2Q8IXW5 612 aaPredicted RBP15.06■□□□□ 0
CCDC57-216ENST00000582885 SRP68Q9UHB9 627 aaKnown RBP15.06■□□□□ 0
CCDC57-216ENST00000582885 PCDHB15Q9Y5E8 787 aa15.06■□□□□ 0
CCDC57-216ENST00000582885 UBN2Q6ZU65 1347 aa15.06■□□□□ 0
CCDC57-216ENST00000582885 COL23A1Q86Y22 540 aaPredicted RBP15.05■□□□□ -0
CCDC57-216ENST00000582885 ZBTB38Q8NAP3 1195 aaPredicted RBP15.05■□□□□ -0
CCDC57-216ENST00000582885 CCDC136Q96JN2 1154 aa15.05■□□□□ -0
CCDC57-216ENST00000582885 ANO8Q9HCE9 1232 aaPredicted RBP15.05■□□□□ -0
CCDC57-216ENST00000582885 NIP7Q9Y221 180 aaKnown RBP eCLIP15.05■□□□□ -0
CCDC57-216ENST00000582885 PNPLA7Q6ZV29 1317 aa15.05■□□□□ -0
CCDC57-216ENST00000582885 CDHR2Q9BYE9 1310 aa15.05■□□□□ -0
CCDC57-216ENST00000582885 NRXN2Q9P2S2 1712 aa15.05■□□□□ -0
CCDC57-216ENST00000582885 GYS1P13807 737 aa15.04■□□□□ -0
CCDC57-216ENST00000582885 GPTP24298 496 aa15.04■□□□□ -0
CCDC57-216ENST00000582885 HDAC1Q13547 482 aaPredicted RBP15.04■□□□□ -0
CCDC57-216ENST00000582885 UBE3BQ7Z3V4 1068 aa15.04■□□□□ -0
CCDC57-216ENST00000582885 PPP1R42Q7Z4L9 355 aa15.04■□□□□ -0
CCDC57-216ENST00000582885 ANKRD44Q8N8A2 993 aa15.04■□□□□ -0
CCDC57-216ENST00000582885 LRRFIP2Q9Y608 721 aaKnown RBP15.04■□□□□ -0
CCDC57-216ENST00000582885 MTX1Q13505 466 aa15.03■□□□□ -0
CCDC57-216ENST00000582885 TBC1D9BQ66K14 1250 aa15.03■□□□□ -0
CCDC57-216ENST00000582885 SETDB2Q96T68 719 aa15.03■□□□□ -0
CCDC57-216ENST00000582885 UTP14AQ9BVJ6 771 aaKnown RBP15.03■□□□□ -0
CCDC57-216ENST00000582885 PLA2G12BQ9BX93 195 aa15.03■□□□□ -0
CCDC57-216ENST00000582885 HSP90B1P14625 803 aaKnown RBP15.02■□□□□ -0
CCDC57-216ENST00000582885 ATP8B2P98198 1209 aa15.02■□□□□ -0
CCDC57-216ENST00000582885 SUSD4Q5VX71 490 aa15.02■□□□□ -0
CCDC57-216ENST00000582885 CEP85Q6P2H3 762 aa15.02■□□□□ -0
CCDC57-216ENST00000582885 NLGN1Q8N2Q7 840 aa15.02■□□□□ -0
CCDC57-216ENST00000582885 KAZALD1Q96I82 304 aa15.02■□□□□ -0
CCDC57-216ENST00000582885 NYXQ9GZU5 481 aa15.02■□□□□ -0
CCDC57-216ENST00000582885 RWDD1Q9H446 243 aaPredicted RBP15.02■□□□□ -0
CCDC57-216ENST00000582885 C1orf115Q9H7X2 142 aa15.02■□□□□ -0
CCDC57-216ENST00000582885 TRMT112Q9UI30 125 aaKnown RBP15.02■□□□□ -0
CCDC57-216ENST00000582885 CARMIL3Q8ND23 1372 aa15.01□□□□□ -0.01
CCDC57-216ENST00000582885 SH3TC1Q8TE82 1336 aa15.01□□□□□ -0.01
CCDC57-216ENST00000582885 NTSR2O95665 410 aa15.01□□□□□ -0.01
CCDC57-216ENST00000582885 TM4SF1P30408 202 aa15.01□□□□□ -0.01
CCDC57-216ENST00000582885 RABL6Q3YEC7 729 aaPredicted RBP15.01□□□□□ -0.01
CCDC57-216ENST00000582885 SIRT2Q8IXJ6 389 aa15.01□□□□□ -0.01
CCDC57-216ENST00000582885 SUCLG2Q96I99 432 aa15.01□□□□□ -0.01
CCDC57-216ENST00000582885 HMMRO75330 724 aa15□□□□□ -0.01
CCDC57-216ENST00000582885 NFIXQ14938 502 aa15□□□□□ -0.01
CCDC57-216ENST00000582885 B4GALNT3Q6L9W6 998 aa15□□□□□ -0.01
CCDC57-216ENST00000582885 ILDR2Q71H61 639 aa15□□□□□ -0.01
CCDC57-216ENST00000582885 FAM89AQ96GI7 184 aa15□□□□□ -0.01
CCDC57-216ENST00000582885 RIC1Q4ADV7 1423 aa15□□□□□ -0.01
CCDC57-216ENST00000582885 KDM2BQ8NHM5 1336 aa14.99□□□□□ -0.01
CCDC57-216ENST00000582885 FOXO4P98177 505 aa14.99□□□□□ -0.01
CCDC57-216ENST00000582885 SLC10A5Q5PT55 438 aa14.99□□□□□ -0.01
CCDC57-216ENST00000582885 TPTE2Q6XPS3 522 aa14.99□□□□□ -0.01
CCDC57-216ENST00000582885 CENPQQ7L2Z9 268 aaPredicted RBP14.99□□□□□ -0.01
CCDC57-216ENST00000582885 SSH3Q8TE77 659 aa14.99□□□□□ -0.01
CCDC57-216ENST00000582885 SLC16A10Q8TF71 515 aa14.99□□□□□ -0.01
CCDC57-216ENST00000582885 BICC1Q9H694 974 aaKnown RBP14.99□□□□□ -0.01
CCDC57-216ENST00000582885 ANKRD31Q8N7Z5 1873 aa14.99□□□□□ -0.01
CCDC57-216ENST00000582885 IRS4O14654 1257 aaPredicted RBP14.98□□□□□ -0.01
CCDC57-216ENST00000582885 MSH5O43196 834 aa14.98□□□□□ -0.01
CCDC57-216ENST00000582885 PDE8AO60658 829 aa14.98□□□□□ -0.01
CCDC57-216ENST00000582885 IGHDP01880 384 aa14.98□□□□□ -0.01
CCDC57-216ENST00000582885 POLA2Q14181 598 aa14.98□□□□□ -0.01
CCDC57-216ENST00000582885 EPHA10Q5JZY3 1008 aa14.98□□□□□ -0.01
CCDC57-216ENST00000582885 BICDL1Q6ZP65 573 aa14.98□□□□□ -0.01
CCDC57-216ENST00000582885 JARID2Q92833 1246 aaPredicted RBP14.98□□□□□ -0.01
CCDC57-216ENST00000582885 CSF1RP07333 972 aa14.97□□□□□ -0.01
CCDC57-216ENST00000582885 NBPF5PQ86XG9 351 aaPredicted RBP14.97□□□□□ -0.01
CCDC57-216ENST00000582885 SPEF2Q9C093 1822 aa14.96□□□□□ -0.01
CCDC57-216ENST00000582885 PNMA6EA0A0J9YXQ4 647 aa14.96□□□□□ -0.01
CCDC57-216ENST00000582885 SRGAP3O43295 1099 aa14.96□□□□□ -0.01
CCDC57-216ENST00000582885 RTL5Q5HYW3 569 aaPredicted RBP14.96□□□□□ -0.01
CCDC57-216ENST00000582885 SMC5Q8IY18 1101 aa14.96□□□□□ -0.01
CCDC57-216ENST00000582885 SYNE4Q8N205 404 aa14.96□□□□□ -0.01
CCDC57-216ENST00000582885 GCC1Q96CN9 775 aa14.96□□□□□ -0.01
CCDC57-216ENST00000582885 DCTPP1Q9H773 170 aa14.96□□□□□ -0.01
CCDC57-216ENST00000582885 TNRC6CQ9HCJ0 1690 aaKnown RBP14.96□□□□□ -0.01
CCDC57-216ENST00000582885 RTL9Q8NET4 1388 aa14.96□□□□□ -0.02
CCDC57-216ENST00000582885 TAF1P21675 1872 aa14.95□□□□□ -0.02
CCDC57-216ENST00000582885 POLRMTO00411 1230 aaKnown RBP14.95□□□□□ -0.02
CCDC57-216ENST00000582885 SERPINB2P05120 415 aa14.95□□□□□ -0.02
CCDC57-216ENST00000582885 DDR1Q08345 913 aa14.95□□□□□ -0.02
CCDC57-216ENST00000582885 ERFEQ4G0M1 354 aa14.95□□□□□ -0.02
CCDC57-216ENST00000582885 LMBR1LQ6UX01 489 aa14.95□□□□□ -0.02
CCDC57-216ENST00000582885 TTLL11Q8NHH1 800 aa14.95□□□□□ -0.02
CCDC57-216ENST00000582885 KIF13BQ9NQT8 1826 aa14.94□□□□□ -0.02
CCDC57-216ENST00000582885 FAM177BA6PVY3 158 aa14.94□□□□□ -0.02
CCDC57-216ENST00000582885 GTF2E1P29083 439 aaPredicted RBP14.94□□□□□ -0.02
CCDC57-216ENST00000582885 CTSWP56202 376 aa14.94□□□□□ -0.02
CCDC57-216ENST00000582885 NUTM1Q86Y26 1132 aa14.94□□□□□ -0.02
CCDC57-216ENST00000582885 CNBD1Q8NA66 436 aa14.94□□□□□ -0.02
CCDC57-216ENST00000582885 NOP58Q9Y2X3 529 aaKnown RBP14.94□□□□□ -0.02
CCDC57-216ENST00000582885 SF3B3Q15393 1217 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms