RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 CDC37L1Q7L3B6 337 aa12.62□□□□□ -0.39
GGA3-212ENST00000582376 ZNF496Q96IT1 587 aaPredicted RBP12.62□□□□□ -0.39
GGA3-212ENST00000582376 PGAP2Q9UHJ9 254 aa12.62□□□□□ -0.39
GGA3-212ENST00000582376 FAM155AB1AL88 458 aaPredicted RBP12.61□□□□□ -0.39
GGA3-212ENST00000582376 GRIPAP1Q4V328 841 aa12.61□□□□□ -0.39
GGA3-212ENST00000582376 ZC3H15Q8WU90 426 aaKnown RBP12.61□□□□□ -0.39
GGA3-212ENST00000582376 CCDC102AQ96A19 550 aa12.61□□□□□ -0.39
GGA3-212ENST00000582376 ZNF652Q9Y2D9 606 aa12.61□□□□□ -0.39
GGA3-212ENST00000582376 FXR1P51114 621 aaKnown RBP eCLIP12.6□□□□□ -0.39
GGA3-212ENST00000582376 FAM177BA6PVY3 158 aa12.59□□□□□ -0.39
GGA3-212ENST00000582376 ZNF790Q6PG37 636 aa12.59□□□□□ -0.39
GGA3-212ENST00000582376 HDAC9Q9UKV0 1011 aa12.59□□□□□ -0.39
GGA3-212ENST00000582376 NIP7Q9Y221 180 aaKnown RBP eCLIP12.59□□□□□ -0.39
GGA3-212ENST00000582376 NPC1L1Q9UHC9 1359 aa12.58□□□□□ -0.4
GGA3-212ENST00000582376 PPIP5K2O43314 1243 aa12.58□□□□□ -0.4
GGA3-212ENST00000582376 GTF2E1P29083 439 aaPredicted RBP12.58□□□□□ -0.4
GGA3-212ENST00000582376 IL13P35225 146 aa12.58□□□□□ -0.4
GGA3-212ENST00000582376 GMPSP49915 693 aaPredicted RBP12.58□□□□□ -0.4
GGA3-212ENST00000582376 USP48Q86UV5 1035 aa12.58□□□□□ -0.4
GGA3-212ENST00000582376 AKAP11Q9UKA4 1901 aa12.58□□□□□ -0.4
GGA3-212ENST00000582376 CDHR2Q9BYE9 1310 aa12.58□□□□□ -0.4
GGA3-212ENST00000582376 ZNF157P51786 506 aaPredicted RBP12.57□□□□□ -0.4
GGA3-212ENST00000582376 HIRAP54198 1017 aaPredicted RBP12.57□□□□□ -0.4
GGA3-212ENST00000582376 CXCL9Q07325 125 aa12.57□□□□□ -0.4
GGA3-212ENST00000582376 MTHFSDQ2M296 383 aaKnown RBP12.57□□□□□ -0.4
GGA3-212ENST00000582376 CRY2Q49AN0 593 aa12.57□□□□□ -0.4
GGA3-212ENST00000582376 C2orf69Q8N8R5 385 aa12.57□□□□□ -0.4
GGA3-212ENST00000582376 FMNL2Q96PY5 1086 aa12.57□□□□□ -0.4
GGA3-212ENST00000582376 BCL2L13Q9BXK5 485 aa12.57□□□□□ -0.4
GGA3-212ENST00000582376 GBA2Q9HCG7 927 aaPredicted RBP12.57□□□□□ -0.4
GGA3-212ENST00000582376 TEFQ10587 303 aa12.56□□□□□ -0.4
GGA3-212ENST00000582376 AOC3Q16853 763 aa12.56□□□□□ -0.4
GGA3-212ENST00000582376 TRPM4Q8TD43 1214 aa12.56□□□□□ -0.4
GGA3-212ENST00000582376 CSRNP1Q96S65 589 aa12.56□□□□□ -0.4
GGA3-212ENST00000582376 ZNRF3Q9ULT6 936 aa12.56□□□□□ -0.4
GGA3-212ENST00000582376 DLL1O00548 723 aa12.55□□□□□ -0.4
GGA3-212ENST00000582376 SLC10A3P09131 477 aa12.55□□□□□ -0.4
GGA3-212ENST00000582376 PIP4K2AP48426 406 aaPredicted RBP12.55□□□□□ -0.4
GGA3-212ENST00000582376 REM2Q8IYK8 340 aaPredicted RBP12.55□□□□□ -0.4
GGA3-212ENST00000582376 RPGRQ92834 1020 aaKnown RBP12.55□□□□□ -0.4
GGA3-212ENST00000582376 VPS33BQ9H267 617 aa12.55□□□□□ -0.4
GGA3-212ENST00000582376 RGL2O15211 777 aa12.54□□□□□ -0.4
GGA3-212ENST00000582376 HMOX1P09601 288 aa12.54□□□□□ -0.4
GGA3-212ENST00000582376 DLK2Q6UY11 383 aa12.54□□□□□ -0.4
GGA3-212ENST00000582376 H7C1D1 291 aa12.53□□□□□ -0.4
GGA3-212ENST00000582376 TCERG1O14776 1098 aaKnown RBP12.53□□□□□ -0.4
GGA3-212ENST00000582376 PPEF1O14829 653 aaPredicted RBP12.53□□□□□ -0.4
GGA3-212ENST00000582376 HOXA10P31260 410 aaPredicted RBP12.53□□□□□ -0.4
GGA3-212ENST00000582376 TNIP1Q15025 636 aa12.53□□□□□ -0.4
GGA3-212ENST00000582376 FBXO46Q6PJ61 603 aaPredicted RBP12.53□□□□□ -0.4
GGA3-212ENST00000582376 KRT26Q7Z3Y9 468 aa12.53□□□□□ -0.4
GGA3-212ENST00000582376 MORC1Q86VD1 984 aa12.53□□□□□ -0.4
GGA3-212ENST00000582376 ZNF296Q8WUU4 475 aaPredicted RBP12.53□□□□□ -0.4
GGA3-212ENST00000582376 TMX4Q9H1E5 349 aaPredicted RBP12.53□□□□□ -0.4
GGA3-212ENST00000582376 CNOT7Q9UIV1 285 aaKnown RBP12.53□□□□□ -0.4
GGA3-212ENST00000582376 KIF7Q2M1P5 1343 aa12.53□□□□□ -0.4
GGA3-212ENST00000582376 SLC51AQ86UW1 340 aa12.52□□□□□ -0.41
GGA3-212ENST00000582376 SUPT20HQ8NEM7 779 aa12.52□□□□□ -0.41
GGA3-212ENST00000582376 RBM17Q96I25 401 aaKnown RBP12.52□□□□□ -0.41
GGA3-212ENST00000582376 POLR3GLQ9BT43 218 aa12.52□□□□□ -0.41
GGA3-212ENST00000582376 NYXQ9GZU5 481 aa12.52□□□□□ -0.41
GGA3-212ENST00000582376 USP16Q9Y5T5 823 aa12.52□□□□□ -0.41
GGA3-212ENST00000582376 ABCC12Q96J65 1359 aa12.52□□□□□ -0.41
GGA3-212ENST00000582376 RAD17O75943 681 aa12.51□□□□□ -0.41
GGA3-212ENST00000582376 NUTM1Q86Y26 1132 aa12.51□□□□□ -0.41
GGA3-212ENST00000582376 MICALL2Q8IY33 904 aa12.51□□□□□ -0.41
GGA3-212ENST00000582376 CRAMP1Q96RY5 1269 aa12.51□□□□□ -0.41
GGA3-212ENST00000582376 RIC1Q4ADV7 1423 aa12.51□□□□□ -0.41
GGA3-212ENST00000582376 SHTN1A0MZ66 631 aa12.5□□□□□ -0.41
GGA3-212ENST00000582376 HLFQ16534 295 aa12.5□□□□□ -0.41
GGA3-212ENST00000582376 IL17REQ8NFR9 667 aa12.5□□□□□ -0.41
GGA3-212ENST00000582376 ADM5C9JUS6 153 aa12.49□□□□□ -0.41
GGA3-212ENST00000582376 KCNQ3O43525 872 aa12.49□□□□□ -0.41
GGA3-212ENST00000582376 TBC1D8O95759 1140 aa12.49□□□□□ -0.41
GGA3-212ENST00000582376 RASAL3Q86YV0 1011 aa12.49□□□□□ -0.41
GGA3-212ENST00000582376 DCPSQ96C86 337 aaKnown RBP12.49□□□□□ -0.41
GGA3-212ENST00000582376 BTBD11A6QL63 1104 aa12.48□□□□□ -0.41
GGA3-212ENST00000582376 GNAT3A8MTJ3 354 aa12.48□□□□□ -0.41
GGA3-212ENST00000582376 GPR25O00155 361 aa12.48□□□□□ -0.41
GGA3-212ENST00000582376 SAMD7Q7Z3H4 446 aa12.48□□□□□ -0.41
GGA3-212ENST00000582376 SLC17A8Q8NDX2 589 aa12.48□□□□□ -0.41
GGA3-212ENST00000582376 RTFDC1Q9BY42 306 aaPredicted RBP12.48□□□□□ -0.41
GGA3-212ENST00000582376 COLQQ9Y215 455 aaPredicted RBP12.48□□□□□ -0.41
GGA3-212ENST00000582376 ATP6V0A2Q9Y487 856 aa12.48□□□□□ -0.41
GGA3-212ENST00000582376 SIPA1L3O60292 1781 aaPredicted RBP12.48□□□□□ -0.41
GGA3-212ENST00000582376 PRAMEF22A3QJZ6 481 aa12.47□□□□□ -0.41
GGA3-212ENST00000582376 POTEFA5A3E0 1075 aa12.47□□□□□ -0.41
GGA3-212ENST00000582376 SNRPA1P09661 255 aaKnown RBP12.47□□□□□ -0.41
GGA3-212ENST00000582376 KIAA2012Q0VF49 1180 aa12.47□□□□□ -0.41
GGA3-212ENST00000582376 TBC1D10BQ4KMP7 808 aaPredicted RBP12.47□□□□□ -0.41
GGA3-212ENST00000582376 NOM1Q5C9Z4 860 aaKnown RBP12.47□□□□□ -0.41
GGA3-212ENST00000582376 NBPF26B4DH59 902 aa12.46□□□□□ -0.41
GGA3-212ENST00000582376 INTS3Q68E01 1043 aaKnown RBP12.46□□□□□ -0.41
GGA3-212ENST00000582376 NBPF10Q6P3W6 841 aaKnown RBP12.46□□□□□ -0.41
GGA3-212ENST00000582376 DPP8Q6V1X1 898 aaPredicted RBP12.46□□□□□ -0.41
GGA3-212ENST00000582376 GAS2L2Q8NHY3 880 aa12.46□□□□□ -0.41
GGA3-212ENST00000582376 DPF2Q92785 391 aa12.46□□□□□ -0.41
GGA3-212ENST00000582376 PANK3Q9H999 370 aa12.46□□□□□ -0.41
GGA3-212ENST00000582376 ZBTB12Q9Y330 459 aaPredicted RBP12.46□□□□□ -0.41
GGA3-212ENST00000582376 YDJCA8MPS7 323 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms