RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 CELF2O95319 508 aaKnown RBP16.97■□□□□ 0.31
CSNK1D-218ENST00000581655 GTF2E1P29083 439 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-218ENST00000581655 BRPF1P55201 1214 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-218ENST00000581655 CC2D2BQ6DHV5 1058 aa16.97■□□□□ 0.31
CSNK1D-218ENST00000581655 EIF4G2P78344 907 aaKnown RBP eCLIP16.96■□□□□ 0.31
CSNK1D-218ENST00000581655 CIAPIN1Q6FI81 312 aa16.96■□□□□ 0.31
CSNK1D-218ENST00000581655 CEMIPQ8WUJ3 1361 aa16.95■□□□□ 0.3
CSNK1D-218ENST00000581655 ABCC12Q96J65 1359 aa16.95■□□□□ 0.3
CSNK1D-218ENST00000581655 CRY2Q49AN0 593 aa16.95■□□□□ 0.3
CSNK1D-218ENST00000581655 HHIPL1Q96JK4 782 aa16.95■□□□□ 0.3
CSNK1D-218ENST00000581655 ADARB2Q9NS39 739 aaKnown RBP16.95■□□□□ 0.3
CSNK1D-218ENST00000581655 HLFQ16534 295 aa16.94■□□□□ 0.3
CSNK1D-218ENST00000581655 SLC51AQ86UW1 340 aa16.94■□□□□ 0.3
CSNK1D-218ENST00000581655 NIM1KQ8IY84 436 aa16.94■□□□□ 0.3
CSNK1D-218ENST00000581655 GLIS2Q9BZE0 524 aaPredicted RBP16.94■□□□□ 0.3
CSNK1D-218ENST00000581655 GPRC5DQ9NZD1 345 aa16.94■□□□□ 0.3
CSNK1D-218ENST00000581655 TIMELESSQ9UNS1 1208 aa16.94■□□□□ 0.3
CSNK1D-218ENST00000581655 NBPF26B4DH59 902 aa16.93■□□□□ 0.3
CSNK1D-218ENST00000581655 U2SURPO15042 1029 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-218ENST00000581655 RGL2O15211 777 aa16.93■□□□□ 0.3
CSNK1D-218ENST00000581655 SNRPA1P09661 255 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-218ENST00000581655 NBPF10Q6P3W6 841 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-218ENST00000581655 NUTM1Q86Y26 1132 aa16.93■□□□□ 0.3
CSNK1D-218ENST00000581655 NBPF15Q8N660 670 aa16.93■□□□□ 0.3
CSNK1D-218ENST00000581655 ZNF408Q9H9D4 720 aa16.93■□□□□ 0.3
CSNK1D-218ENST00000581655 SOX10P56693 466 aa16.92■□□□□ 0.3
CSNK1D-218ENST00000581655 RPGRQ92834 1020 aaKnown RBP16.92■□□□□ 0.3
CSNK1D-218ENST00000581655 ZIC5Q96T25 663 aa16.92■□□□□ 0.3
CSNK1D-218ENST00000581655 TCERG1O14776 1098 aaKnown RBP16.91■□□□□ 0.3
CSNK1D-218ENST00000581655 PPIP5K2O43314 1243 aa16.91■□□□□ 0.3
CSNK1D-218ENST00000581655 GRIPAP1Q4V328 841 aa16.91■□□□□ 0.3
CSNK1D-218ENST00000581655 HOXA10P31260 410 aaPredicted RBP16.9■□□□□ 0.3
CSNK1D-218ENST00000581655 NOGQ13253 232 aa16.9■□□□□ 0.3
CSNK1D-218ENST00000581655 AOC3Q16853 763 aa16.9■□□□□ 0.3
CSNK1D-218ENST00000581655 NYXQ9GZU5 481 aa16.9■□□□□ 0.3
CSNK1D-218ENST00000581655 COL3A1P02461 1466 aaPredicted RBP16.9■□□□□ 0.3
CSNK1D-218ENST00000581655 NPC1L1Q9UHC9 1359 aa16.89■□□□□ 0.3
CSNK1D-218ENST00000581655 PPEF1O14829 653 aaPredicted RBP16.89■□□□□ 0.29
CSNK1D-218ENST00000581655 CXCL9Q07325 125 aa16.89■□□□□ 0.29
CSNK1D-218ENST00000581655 RIC1Q4ADV7 1423 aa16.88■□□□□ 0.29
CSNK1D-218ENST00000581655 GMPSP49915 693 aaPredicted RBP16.88■□□□□ 0.29
CSNK1D-218ENST00000581655 PRPF38BQ5VTL8 546 aaKnown RBP16.88■□□□□ 0.29
CSNK1D-218ENST00000581655 PHACTR3Q96KR7 559 aa16.88■□□□□ 0.29
CSNK1D-218ENST00000581655 PGAP2Q9UHJ9 254 aa16.88■□□□□ 0.29
CSNK1D-218ENST00000581655 NUP98P52948 1817 aa16.88■□□□□ 0.29
CSNK1D-218ENST00000581655 KIF7Q2M1P5 1343 aa16.88■□□□□ 0.29
CSNK1D-218ENST00000581655 CC2D1BQ5T0F9 858 aaKnown RBP16.87■□□□□ 0.29
CSNK1D-218ENST00000581655 CRAMP1Q96RY5 1269 aa16.87■□□□□ 0.29
CSNK1D-218ENST00000581655 HIRAP54198 1017 aaPredicted RBP16.86■□□□□ 0.29
CSNK1D-218ENST00000581655 HUNKP57058 714 aa16.86■□□□□ 0.29
CSNK1D-218ENST00000581655 CDC37L1Q7L3B6 337 aa16.86■□□□□ 0.29
CSNK1D-218ENST00000581655 NGEFQ8N5V2 710 aa16.86■□□□□ 0.29
CSNK1D-218ENST00000581655 ZC3H15Q8WU90 426 aaKnown RBP16.86■□□□□ 0.29
CSNK1D-218ENST00000581655 RBM17Q96I25 401 aaKnown RBP16.86■□□□□ 0.29
CSNK1D-218ENST00000581655 ZNRF3Q9ULT6 936 aa16.86■□□□□ 0.29
CSNK1D-218ENST00000581655 PRKAR2BP31323 418 aa16.85■□□□□ 0.29
CSNK1D-218ENST00000581655 MCM10Q7L590 875 aa16.85■□□□□ 0.29
CSNK1D-218ENST00000581655 TRPM4Q8TD43 1214 aa16.85■□□□□ 0.29
CSNK1D-218ENST00000581655 GPTP24298 496 aa16.84■□□□□ 0.29
CSNK1D-218ENST00000581655 BCL2L13Q9BXK5 485 aa16.84■□□□□ 0.29
CSNK1D-218ENST00000581655 VPS33BQ9H267 617 aa16.84■□□□□ 0.29
CSNK1D-218ENST00000581655 UBN2Q6ZU65 1347 aa16.84■□□□□ 0.29
CSNK1D-218ENST00000581655 LAMB4A4D0S4 1761 aa16.83■□□□□ 0.28
CSNK1D-218ENST00000581655 ERVV-1B6SEH8 477 aa16.83■□□□□ 0.28
CSNK1D-218ENST00000581655 RAD17O75943 681 aa16.83■□□□□ 0.28
CSNK1D-218ENST00000581655 SUSD4Q5VX71 490 aa16.83■□□□□ 0.28
CSNK1D-218ENST00000581655 DLK2Q6UY11 383 aa16.83■□□□□ 0.28
CSNK1D-218ENST00000581655 MAP3K15Q6ZN16 1313 aa16.83■□□□□ 0.28
CSNK1D-218ENST00000581655 C3orf67Q6ZVT6 689 aa16.83■□□□□ 0.28
CSNK1D-218ENST00000581655 RTF1Q92541 710 aaKnown RBP16.83■□□□□ 0.28
CSNK1D-218ENST00000581655 CDHR2Q9BYE9 1310 aa16.83■□□□□ 0.28
CSNK1D-218ENST00000581655 TMX4Q9H1E5 349 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-218ENST00000581655 IBTKQ9P2D0 1353 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-218ENST00000581655 SHTN1A0MZ66 631 aa16.82■□□□□ 0.28
CSNK1D-218ENST00000581655 FAM155AB1AL88 458 aaPredicted RBP16.82■□□□□ 0.28
CSNK1D-218ENST00000581655 CNGB1Q14028 1251 aaPredicted RBP16.82■□□□□ 0.28
CSNK1D-218ENST00000581655 DCTN1Q14203 1278 aa16.82■□□□□ 0.28
CSNK1D-218ENST00000581655 TTLL7Q6ZT98 887 aa16.82■□□□□ 0.28
CSNK1D-218ENST00000581655 USP48Q86UV5 1035 aa16.82■□□□□ 0.28
CSNK1D-218ENST00000581655 RSPH6AQ9H0K4 717 aa16.82■□□□□ 0.28
CSNK1D-218ENST00000581655 SAGE1Q9NXZ1 904 aa16.82■□□□□ 0.28
CSNK1D-218ENST00000581655 ATP6V0A2Q9Y487 856 aa16.82■□□□□ 0.28
CSNK1D-218ENST00000581655 AKAP11Q9UKA4 1901 aa16.82■□□□□ 0.28
CSNK1D-218ENST00000581655 PER1O15534 1290 aaPredicted RBP16.81■□□□□ 0.28
CSNK1D-218ENST00000581655 TRPA1O75762 1119 aa16.81■□□□□ 0.28
CSNK1D-218ENST00000581655 KIF23Q02241 960 aaPredicted RBP16.81■□□□□ 0.28
CSNK1D-218ENST00000581655 RGMBQ6NW40 437 aa16.81■□□□□ 0.28
CSNK1D-218ENST00000581655 SUPT20HQ8NEM7 779 aa16.81■□□□□ 0.28
CSNK1D-218ENST00000581655 CNOT7Q9UIV1 285 aaKnown RBP16.81■□□□□ 0.28
CSNK1D-218ENST00000581655 POLR2AP24928 1970 aaKnown RBP16.8■□□□□ 0.28
CSNK1D-218ENST00000581655 NTSR2O95665 410 aa16.8■□□□□ 0.28
CSNK1D-218ENST00000581655 TNIP1Q15025 636 aa16.8■□□□□ 0.28
CSNK1D-218ENST00000581655 KIF6Q6ZMV9 814 aa16.8■□□□□ 0.28
CSNK1D-218ENST00000581655 RTFDC1Q9BY42 306 aaPredicted RBP16.8■□□□□ 0.28
CSNK1D-218ENST00000581655 ZBTB3Q9H5J0 574 aa16.8■□□□□ 0.28
CSNK1D-218ENST00000581655 RNF186Q9NXI6 227 aa16.8■□□□□ 0.28
CSNK1D-218ENST00000581655 KIAA2012Q0VF49 1180 aa16.79■□□□□ 0.28
CSNK1D-218ENST00000581655 DPP8Q6V1X1 898 aaPredicted RBP16.79■□□□□ 0.28
CSNK1D-218ENST00000581655 NLRP3Q96P20 1036 aa16.79■□□□□ 0.28
CSNK1D-218ENST00000581655 GBA2Q9HCG7 927 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms