RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 QSER1Q2KHR3 1735 aa11.54□□□□□ -0.56
CDK5RAP3-220ENST00000581160 UTYO14607 1347 aa11.54□□□□□ -0.56
CDK5RAP3-220ENST00000581160 GRM8O00222 908 aa11.53□□□□□ -0.56
CDK5RAP3-220ENST00000581160 SUSD4Q5VX71 490 aa11.53□□□□□ -0.56
CDK5RAP3-220ENST00000581160 PPP1R42Q7Z4L9 355 aa11.53□□□□□ -0.56
CDK5RAP3-220ENST00000581160 UTP14AQ9BVJ6 771 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-220ENST00000581160 BCORQ6W2J9 1755 aa11.53□□□□□ -0.56
CDK5RAP3-220ENST00000581160 TUBGCP6Q96RT7 1819 aa11.53□□□□□ -0.56
CDK5RAP3-220ENST00000581160 C4AP0C0L4 1744 aa11.52□□□□□ -0.56
CDK5RAP3-220ENST00000581160 PCCAP05165 728 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP3-220ENST00000581160 NBPF7P0C2Y1 421 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP3-220ENST00000581160 NFIXQ14938 502 aa11.52□□□□□ -0.57
CDK5RAP3-220ENST00000581160 BICDL1Q6ZP65 573 aa11.52□□□□□ -0.57
CDK5RAP3-220ENST00000581160 ZBTB38Q8NAP3 1195 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP3-220ENST00000581160 MEIS3Q99687 375 aa11.52□□□□□ -0.57
CDK5RAP3-220ENST00000581160 UBN2Q6ZU65 1347 aa11.52□□□□□ -0.57
CDK5RAP3-220ENST00000581160 N4BP2Q86UW6 1770 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP3-220ENST00000581160 GNAI2P04899 355 aa11.51□□□□□ -0.57
CDK5RAP3-220ENST00000581160 UBTFL1P0CB47 393 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP3-220ENST00000581160 CASP7P55210 303 aa11.51□□□□□ -0.57
CDK5RAP3-220ENST00000581160 TPTE2Q6XPS3 522 aa11.51□□□□□ -0.57
CDK5RAP3-220ENST00000581160 NYXQ9GZU5 481 aa11.51□□□□□ -0.57
CDK5RAP3-220ENST00000581160 TRMT112Q9UI30 125 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-220ENST00000581160 SCN7AQ01118 1682 aa11.51□□□□□ -0.57
CDK5RAP3-220ENST00000581160 ANKRD36CQ5JPF3 1778 aa11.5□□□□□ -0.57
CDK5RAP3-220ENST00000581160 NTSR2O95665 410 aa11.5□□□□□ -0.57
CDK5RAP3-220ENST00000581160 R3HDM1Q15032 1099 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-220ENST00000581160 SLC10A5Q5PT55 438 aa11.5□□□□□ -0.57
CDK5RAP3-220ENST00000581160 JARID2Q92833 1246 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-220ENST00000581160 FAM89AQ96GI7 184 aa11.5□□□□□ -0.57
CDK5RAP3-220ENST00000581160 PDGFDQ9GZP0 370 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-220ENST00000581160 SH3TC1Q8TE82 1336 aa11.5□□□□□ -0.57
CDK5RAP3-220ENST00000581160 CDHR2Q9BYE9 1310 aa11.5□□□□□ -0.57
CDK5RAP3-220ENST00000581160 AFDNP55196 1824 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-220ENST00000581160 FAM177BA6PVY3 158 aa11.49□□□□□ -0.57
CDK5RAP3-220ENST00000581160 POLRMTO00411 1230 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-220ENST00000581160 SERPINB2P05120 415 aa11.49□□□□□ -0.57
CDK5RAP3-220ENST00000581160 UBE3BQ7Z3V4 1068 aa11.49□□□□□ -0.57
CDK5RAP3-220ENST00000581160 NBPF5PQ86XG9 351 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-220ENST00000581160 KAZALD1Q96I82 304 aa11.49□□□□□ -0.57
CDK5RAP3-220ENST00000581160 PLA2G12BQ9BX93 195 aa11.49□□□□□ -0.57
CDK5RAP3-220ENST00000581160 SOCS7O14512 581 aa11.48□□□□□ -0.57
CDK5RAP3-220ENST00000581160 IRS4O14654 1257 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-220ENST00000581160 HSP90B1P14625 803 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-220ENST00000581160 GTF2E1P29083 439 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-220ENST00000581160 ATP8B2P98198 1209 aa11.48□□□□□ -0.57
CDK5RAP3-220ENST00000581160 DDR1Q08345 913 aa11.48□□□□□ -0.57
CDK5RAP3-220ENST00000581160 RPAP2Q8IXW5 612 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-220ENST00000581160 SYNE4Q8N205 404 aa11.48□□□□□ -0.57
CDK5RAP3-220ENST00000581160 SUCLG2Q96I99 432 aa11.48□□□□□ -0.57
CDK5RAP3-220ENST00000581160 PARP3Q9Y6F1 533 aa11.48□□□□□ -0.57
CDK5RAP3-220ENST00000581160 CARMIL3Q8ND23 1372 aa11.48□□□□□ -0.57
CDK5RAP3-220ENST00000581160 PDE8AO60658 829 aa11.47□□□□□ -0.57
CDK5RAP3-220ENST00000581160 MMP10P09238 476 aa11.47□□□□□ -0.57
CDK5RAP3-220ENST00000581160 FOXO4P98177 505 aa11.47□□□□□ -0.57
CDK5RAP3-220ENST00000581160 ERFEQ4G0M1 354 aa11.47□□□□□ -0.57
CDK5RAP3-220ENST00000581160 RTL5Q5HYW3 569 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-220ENST00000581160 MSL1Q68DK7 614 aa11.47□□□□□ -0.57
CDK5RAP3-220ENST00000581160 C1orf115Q9H7X2 142 aa11.47□□□□□ -0.57
CDK5RAP3-220ENST00000581160 PCDHB15Q9Y5E8 787 aa11.47□□□□□ -0.57
CDK5RAP3-220ENST00000581160 LRRFIP2Q9Y608 721 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-220ENST00000581160 PSDA5PKW4 1024 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-220ENST00000581160 CSF1RP07333 972 aa11.46□□□□□ -0.57
CDK5RAP3-220ENST00000581160 EPHA10Q5JZY3 1008 aa11.46□□□□□ -0.57
CDK5RAP3-220ENST00000581160 PRR5LQ6MZQ0 368 aa11.46□□□□□ -0.57
CDK5RAP3-220ENST00000581160 NUTM1Q86Y26 1132 aa11.46□□□□□ -0.57
CDK5RAP3-220ENST00000581160 ANKRD44Q8N8A2 993 aa11.46□□□□□ -0.57
CDK5RAP3-220ENST00000581160 MTFR1LQ9H019 292 aa11.46□□□□□ -0.57
CDK5RAP3-220ENST00000581160 PPP4R2Q9NY27 417 aa11.46□□□□□ -0.57
CDK5RAP3-220ENST00000581160 GTF3C3Q9Y5Q9 886 aa11.46□□□□□ -0.57
CDK5RAP3-220ENST00000581160 HCLS1P14317 486 aaPredicted RBP11.45□□□□□ -0.58
CDK5RAP3-220ENST00000581160 MTX1Q13505 466 aa11.45□□□□□ -0.58
CDK5RAP3-220ENST00000581160 RABL6Q3YEC7 729 aaPredicted RBP11.45□□□□□ -0.58
CDK5RAP3-220ENST00000581160 CEP85Q6P2H3 762 aa11.45□□□□□ -0.58
CDK5RAP3-220ENST00000581160 CNBD1Q8NA66 436 aa11.45□□□□□ -0.58
CDK5RAP3-220ENST00000581160 BICC1Q9H694 974 aaKnown RBP11.45□□□□□ -0.58
CDK5RAP3-220ENST00000581160 COL24A1Q17RW2 1714 aa11.45□□□□□ -0.58
CDK5RAP3-220ENST00000581160 NPHP1O15259 732 aa11.44□□□□□ -0.58
CDK5RAP3-220ENST00000581160 ZBTB7AO95365 584 aa11.44□□□□□ -0.58
CDK5RAP3-220ENST00000581160 ST5P78524 1137 aa11.44□□□□□ -0.58
CDK5RAP3-220ENST00000581160 HDAC1Q13547 482 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-220ENST00000581160 SF3B3Q15393 1217 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-220ENST00000581160 LMBR1LQ6UX01 489 aa11.44□□□□□ -0.58
CDK5RAP3-220ENST00000581160 SIRT2Q8IXJ6 389 aa11.44□□□□□ -0.58
CDK5RAP3-220ENST00000581160 TTLL11Q8NHH1 800 aa11.44□□□□□ -0.58
CDK5RAP3-220ENST00000581160 NLRP3Q96P20 1036 aa11.44□□□□□ -0.58
CDK5RAP3-220ENST00000581160 BRIP1Q9BX63 1249 aa11.44□□□□□ -0.58
CDK5RAP3-220ENST00000581160 RWDD1Q9H446 243 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-220ENST00000581160 ATF5Q9Y2D1 282 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-220ENST00000581160 CASZ1Q86V15 1759 aa11.44□□□□□ -0.58
CDK5RAP3-220ENST00000581160 POLD1P28340 1107 aa11.43□□□□□ -0.58
CDK5RAP3-220ENST00000581160 CTSWP56202 376 aa11.43□□□□□ -0.58
CDK5RAP3-220ENST00000581160 POLA2Q14181 598 aa11.43□□□□□ -0.58
CDK5RAP3-220ENST00000581160 CCDC24Q8N4L8 307 aa11.43□□□□□ -0.58
CDK5RAP3-220ENST00000581160 SSH3Q8TE77 659 aa11.43□□□□□ -0.58
CDK5RAP3-220ENST00000581160 PNMA6EA0A0J9YXQ4 647 aa11.42□□□□□ -0.58
CDK5RAP3-220ENST00000581160 KLRG2A4D1S0 409 aaPredicted RBP11.42□□□□□ -0.58
CDK5RAP3-220ENST00000581160 SRGAP3O43295 1099 aa11.42□□□□□ -0.58
CDK5RAP3-220ENST00000581160 HMMRO75330 724 aa11.42□□□□□ -0.58
CDK5RAP3-220ENST00000581160 NRXN2Q9P2S2 1712 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms