RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 DMRTC2Q8IXT2 367 aaPredicted RBP7.63□□□□□ -1.19
SMG8-205ENST00000580798 SUSD3Q96L08 255 aa7.63□□□□□ -1.19
SMG8-205ENST00000580798 PHACTR1Q9C0D0 580 aa7.63□□□□□ -1.19
SMG8-205ENST00000580798 HIRAP54198 1017 aaPredicted RBP7.62□□□□□ -1.19
SMG8-205ENST00000580798 PSAPL1Q6NUJ1 521 aa7.62□□□□□ -1.19
SMG8-205ENST00000580798 TSPAN10Q9H1Z9 355 aaPredicted RBP7.62□□□□□ -1.19
SMG8-205ENST00000580798 RNF112Q9ULX5 631 aa7.62□□□□□ -1.19
SMG8-205ENST00000580798 MCTP1Q6DN14 999 aa7.61□□□□□ -1.19
SMG8-205ENST00000580798 DEPDC4Q8N2C3 294 aa7.61□□□□□ -1.19
SMG8-205ENST00000580798 NAGPAQ9UK23 515 aa7.61□□□□□ -1.19
SMG8-205ENST00000580798 NFATC2IPQ8NCF5 419 aa7.6□□□□□ -1.19
SMG8-205ENST00000580798 WFDC12Q8WWY7 111 aa7.6□□□□□ -1.19
SMG8-205ENST00000580798 DNAJB12Q9NXW2 375 aaKnown RBP7.6□□□□□ -1.19
SMG8-205ENST00000580798 KIAA1024Q9UPX6 916 aa7.6□□□□□ -1.19
SMG8-205ENST00000580798 ZBTB7BO15156 539 aaPredicted RBP7.59□□□□□ -1.19
SMG8-205ENST00000580798 TPCN2Q8NHX9 752 aa7.59□□□□□ -1.19
SMG8-205ENST00000580798 USP17L5A8MUK1 530 aa7.58□□□□□ -1.2
SMG8-205ENST00000580798 RGS9O75916 674 aaPredicted RBP7.58□□□□□ -1.2
SMG8-205ENST00000580798 IREB2P48200 963 aaKnown RBP7.58□□□□□ -1.2
SMG8-205ENST00000580798 BTLAQ7Z6A9 289 aa7.58□□□□□ -1.2
SMG8-205ENST00000580798 ALG2Q9H553 416 aa7.58□□□□□ -1.2
SMG8-205ENST00000580798 EFCC1Q9HA90 598 aa7.58□□□□□ -1.2
SMG8-205ENST00000580798 CHMP3Q9Y3E7 222 aa7.58□□□□□ -1.2
SMG8-205ENST00000580798 NOS3P29474 1203 aa7.57□□□□□ -1.2
SMG8-205ENST00000580798 CCDC102BQ68D86 513 aa7.57□□□□□ -1.2
SMG8-205ENST00000580798 MSL1Q68DK7 614 aa7.57□□□□□ -1.2
SMG8-205ENST00000580798 GSX2Q9BZM3 304 aa7.57□□□□□ -1.2
SMG8-205ENST00000580798 CLDN10P78369 228 aa7.56□□□□□ -1.2
SMG8-205ENST00000580798 FBXO11Q86XK2 927 aa7.56□□□□□ -1.2
SMG8-205ENST00000580798 DTWD1Q8N5C7 304 aa7.56□□□□□ -1.2
SMG8-205ENST00000580798 MEGF10Q96KG7 1140 aa7.56□□□□□ -1.2
SMG8-205ENST00000580798 GRIK5Q16478 980 aa7.55□□□□□ -1.2
SMG8-205ENST00000580798 PRR23CQ6ZRP0 262 aa7.55□□□□□ -1.2
SMG8-205ENST00000580798 TRIM50Q86XT4 487 aa7.55□□□□□ -1.2
SMG8-205ENST00000580798 ALDH16A1Q8IZ83 802 aa7.55□□□□□ -1.2
SMG8-205ENST00000580798 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.55□□□□□ -1.2
SMG8-205ENST00000580798 COL17A1Q9UMD9 1497 aaPredicted RBP7.55□□□□□ -1.2
SMG8-205ENST00000580798 C21orf2O43822 256 aa7.54□□□□□ -1.2
SMG8-205ENST00000580798 NFKB1P19838 968 aa7.54□□□□□ -1.2
SMG8-205ENST00000580798 FAM35AQ86V20 835 aa7.54□□□□□ -1.2
SMG8-205ENST00000580798 PNMA5Q96PV4 448 aa7.54□□□□□ -1.2
SMG8-205ENST00000580798 LPIN3Q9BQK8 851 aa7.54□□□□□ -1.2
SMG8-205ENST00000580798 PCMTD2Q9NV79 361 aa7.54□□□□□ -1.2
SMG8-205ENST00000580798 M0R2N6 131 aa7.53□□□□□ -1.2
SMG8-205ENST00000580798 PPP1R12BO60237 982 aaPredicted RBP7.53□□□□□ -1.2
SMG8-205ENST00000580798 CCINQ13939 588 aa7.53□□□□□ -1.2
SMG8-205ENST00000580798 TSEN2Q8NCE0 465 aaKnown RBP7.53□□□□□ -1.2
SMG8-205ENST00000580798 COG6Q9Y2V7 657 aa7.53□□□□□ -1.2
SMG8-205ENST00000580798 CPB1P15086 417 aa7.52□□□□□ -1.21
SMG8-205ENST00000580798 ATP1A2P50993 1020 aa7.52□□□□□ -1.21
SMG8-205ENST00000580798 PLAURQ03405 335 aa7.52□□□□□ -1.21
SMG8-205ENST00000580798 MCM6Q14566 821 aa7.52□□□□□ -1.21
SMG8-205ENST00000580798 IGF2-ASQ6U949 168 aa7.52□□□□□ -1.21
SMG8-205ENST00000580798 PAX4O43316 350 aa7.51□□□□□ -1.21
SMG8-205ENST00000580798 HIF1AQ16665 826 aa7.51□□□□□ -1.21
SMG8-205ENST00000580798 PERM1Q5SV97 790 aa7.51□□□□□ -1.21
SMG8-205ENST00000580798 C2orf49Q9BVC5 232 aaPredicted RBP7.51□□□□□ -1.21
SMG8-205ENST00000580798 FRRS1LQ9P0K9 344 aa7.51□□□□□ -1.21
SMG8-205ENST00000580798 ZBTB42B2RXF5 422 aa7.5□□□□□ -1.21
SMG8-205ENST00000580798 DEAF1O75398 565 aaPredicted RBP7.5□□□□□ -1.21
SMG8-205ENST00000580798 GRNP28799 593 aaKnown RBP7.5□□□□□ -1.21
SMG8-205ENST00000580798 SSTR4P31391 388 aa7.5□□□□□ -1.21
SMG8-205ENST00000580798 IER5Q5VY09 327 aa7.5□□□□□ -1.21
SMG8-205ENST00000580798 WFDC8Q8IUA0 241 aa7.5□□□□□ -1.21
SMG8-205ENST00000580798 PLEKHM2Q8IWE5 1019 aa7.5□□□□□ -1.21
SMG8-205ENST00000580798 STAG2Q8N3U4 1231 aa7.5□□□□□ -1.21
SMG8-205ENST00000580798 OGFOD1Q8N543 542 aa7.5□□□□□ -1.21
SMG8-205ENST00000580798 NGLY1Q96IV0 654 aa7.5□□□□□ -1.21
SMG8-205ENST00000580798 ATAD2Q6PL18 1390 aa7.49□□□□□ -1.21
SMG8-205ENST00000580798 USP17L3A6NCW0 530 aa7.49□□□□□ -1.21
SMG8-205ENST00000580798 USP17L4A6NCW7 530 aa7.49□□□□□ -1.21
SMG8-205ENST00000580798 DKK1O94907 266 aa7.49□□□□□ -1.21
SMG8-205ENST00000580798 PRKCSHP14314 528 aaPredicted RBP7.49□□□□□ -1.21
SMG8-205ENST00000580798 FSTP19883 344 aa7.49□□□□□ -1.21
SMG8-205ENST00000580798 CD97P48960 835 aa7.49□□□□□ -1.21
SMG8-205ENST00000580798 PCSK7Q16549 785 aa7.49□□□□□ -1.21
SMG8-205ENST00000580798 USP17L2Q6R6M4 530 aa7.49□□□□□ -1.21
SMG8-205ENST00000580798 USP17L1Q7RTZ2 530 aa7.49□□□□□ -1.21
SMG8-205ENST00000580798 DZIP1LQ8IYY4 767 aaKnown RBP7.49□□□□□ -1.21
SMG8-205ENST00000580798 LARGE2Q8N3Y3 721 aa7.49□□□□□ -1.21
SMG8-205ENST00000580798 FMNL2Q96PY5 1086 aa7.49□□□□□ -1.21
SMG8-205ENST00000580798 DMGDHQ9UI17 866 aaKnown RBP7.49□□□□□ -1.21
SMG8-205ENST00000580798 BCS1LQ9Y276 419 aa7.49□□□□□ -1.21
SMG8-205ENST00000580798 PALM3A6NDB9 673 aaPredicted RBP7.48□□□□□ -1.21
SMG8-205ENST00000580798 TXKP42681 527 aa7.48□□□□□ -1.21
SMG8-205ENST00000580798 ELMSAN1Q6PJG2 1045 aa7.48□□□□□ -1.21
SMG8-205ENST00000580798 SLC51AQ86UW1 340 aa7.48□□□□□ -1.21
SMG8-205ENST00000580798 SIX5Q8N196 739 aa7.48□□□□□ -1.21
SMG8-205ENST00000580798 ZFATQ9P243 1243 aa7.48□□□□□ -1.21
SMG8-205ENST00000580798 TGFBR3LH3BV60 316 aa7.47□□□□□ -1.21
SMG8-205ENST00000580798 DLL1O00548 723 aa7.47□□□□□ -1.21
SMG8-205ENST00000580798 MAP3K6O95382 1288 aa7.47□□□□□ -1.21
SMG8-205ENST00000580798 DHX32Q7L7V1 743 aaKnown RBP7.47□□□□□ -1.21
SMG8-205ENST00000580798 TRPM4Q8TD43 1214 aa7.47□□□□□ -1.21
SMG8-205ENST00000580798 TTC9Q92623 222 aa7.47□□□□□ -1.21
SMG8-205ENST00000580798 ALX3O95076 343 aa7.46□□□□□ -1.22
SMG8-205ENST00000580798 MLLT1Q03111 559 aaPredicted RBP7.46□□□□□ -1.22
SMG8-205ENST00000580798 RTN1Q16799 776 aa7.46□□□□□ -1.22
SMG8-205ENST00000580798 KRT25Q7Z3Z0 450 aa7.46□□□□□ -1.22
SMG8-205ENST00000580798 ADAMTS19Q8TE59 1207 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms