RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 EIF5P55010 431 aaKnown RBP10.67□□□□□ -0.7
SMARCE1-217ENST00000580654 SLC39A6Q13433 755 aa10.67□□□□□ -0.7
SMARCE1-217ENST00000580654 STYK1Q6J9G0 422 aa10.67□□□□□ -0.7
SMARCE1-217ENST00000580654 PAXIP1Q6ZW49 1069 aaPredicted RBP10.67□□□□□ -0.7
SMARCE1-217ENST00000580654 PCDHB13Q9Y5F0 798 aa10.67□□□□□ -0.7
SMARCE1-217ENST00000580654 BCORQ6W2J9 1755 aa10.67□□□□□ -0.7
SMARCE1-217ENST00000580654 COL4A5P29400 1685 aa10.66□□□□□ -0.7
SMARCE1-217ENST00000580654 FZD9O00144 591 aa10.66□□□□□ -0.7
SMARCE1-217ENST00000580654 PLCG2P16885 1265 aa10.66□□□□□ -0.7
SMARCE1-217ENST00000580654 CANXP27824 592 aaKnown RBP10.66□□□□□ -0.7
SMARCE1-217ENST00000580654 MAP2K2P36507 400 aa10.66□□□□□ -0.7
SMARCE1-217ENST00000580654 SOX10P56693 466 aa10.66□□□□□ -0.7
SMARCE1-217ENST00000580654 C1orf141Q5JVX7 400 aa10.66□□□□□ -0.7
SMARCE1-217ENST00000580654 SOGA3Q5TF21 947 aa10.66□□□□□ -0.7
SMARCE1-217ENST00000580654 OLFM4Q6UX06 510 aa10.66□□□□□ -0.7
SMARCE1-217ENST00000580654 ZNF277Q9NRM2 450 aaPredicted RBP10.66□□□□□ -0.7
SMARCE1-217ENST00000580654 TLL2Q9Y6L7 1015 aa10.66□□□□□ -0.7
SMARCE1-217ENST00000580654 TRAF5O00463 557 aa10.65□□□□□ -0.7
SMARCE1-217ENST00000580654 FKBP4Q02790 459 aaKnown RBP eCLIP10.65□□□□□ -0.7
SMARCE1-217ENST00000580654 MASTLQ96GX5 879 aa10.65□□□□□ -0.7
SMARCE1-217ENST00000580654 SLC52A2Q9HAB3 445 aa10.65□□□□□ -0.7
SMARCE1-217ENST00000580654 LGR6Q9HBX8 967 aa10.65□□□□□ -0.7
SMARCE1-217ENST00000580654 SNPHO15079 494 aa10.64□□□□□ -0.71
SMARCE1-217ENST00000580654 CCDC93Q567U6 631 aa10.64□□□□□ -0.71
SMARCE1-217ENST00000580654 SNED1Q8TER0 1413 aa10.64□□□□□ -0.71
SMARCE1-217ENST00000580654 CA12O43570 354 aa10.63□□□□□ -0.71
SMARCE1-217ENST00000580654 TNNT2P45379 298 aaPredicted RBP10.63□□□□□ -0.71
SMARCE1-217ENST00000580654 VSIG10Q8N0Z9 540 aa10.63□□□□□ -0.71
SMARCE1-217ENST00000580654 GPC2Q8N158 579 aa10.63□□□□□ -0.71
SMARCE1-217ENST00000580654 IARSP41252 1262 aaKnown RBP10.62□□□□□ -0.71
SMARCE1-217ENST00000580654 EPS15P42566 896 aa10.62□□□□□ -0.71
SMARCE1-217ENST00000580654 SCNN1DP51172 638 aa10.62□□□□□ -0.71
SMARCE1-217ENST00000580654 BRPF1P55201 1214 aaPredicted RBP10.62□□□□□ -0.71
SMARCE1-217ENST00000580654 SAPCD2Q86UD0 394 aa10.62□□□□□ -0.71
SMARCE1-217ENST00000580654 MIER1Q8N108 512 aa10.62□□□□□ -0.71
SMARCE1-217ENST00000580654 CNBD1Q8NA66 436 aa10.62□□□□□ -0.71
SMARCE1-217ENST00000580654 ZIC5Q96T25 663 aa10.62□□□□□ -0.71
SMARCE1-217ENST00000580654 TBC1D2BQ9UPU7 963 aa10.62□□□□□ -0.71
SMARCE1-217ENST00000580654 A0A087WZG4 1122 aa10.61□□□□□ -0.71
SMARCE1-217ENST00000580654 IRX5P78411 483 aaPredicted RBP10.61□□□□□ -0.71
SMARCE1-217ENST00000580654 AKAP4Q5JQC9 854 aa10.61□□□□□ -0.71
SMARCE1-217ENST00000580654 CIAPIN1Q6FI81 312 aa10.61□□□□□ -0.71
SMARCE1-217ENST00000580654 KLRG2A4D1S0 409 aaPredicted RBP10.6□□□□□ -0.71
SMARCE1-217ENST00000580654 RNMTO43148 476 aaKnown RBP10.6□□□□□ -0.71
SMARCE1-217ENST00000580654 CAMTA2O94983 1202 aa10.6□□□□□ -0.71
SMARCE1-217ENST00000580654 ST5P78524 1137 aa10.6□□□□□ -0.71
SMARCE1-217ENST00000580654 SULT6B1Q6IMI4 303 aa10.6□□□□□ -0.71
SMARCE1-217ENST00000580654 IFNL1Q8IU54 200 aa10.6□□□□□ -0.71
SMARCE1-217ENST00000580654 SYNE4Q8N205 404 aa10.6□□□□□ -0.71
SMARCE1-217ENST00000580654 GCC1Q96CN9 775 aa10.6□□□□□ -0.71
SMARCE1-217ENST00000580654 TMEM106CQ9BVX2 250 aa10.6□□□□□ -0.71
SMARCE1-217ENST00000580654 NPR1P16066 1061 aa10.59□□□□□ -0.71
SMARCE1-217ENST00000580654 RTKN2Q8IZC4 609 aa10.59□□□□□ -0.71
SMARCE1-217ENST00000580654 HHIPL1Q96JK4 782 aa10.59□□□□□ -0.71
SMARCE1-217ENST00000580654 SETDB2Q96T68 719 aa10.59□□□□□ -0.71
SMARCE1-217ENST00000580654 GJA3Q9Y6H8 435 aa10.59□□□□□ -0.71
SMARCE1-217ENST00000580654 SIPA1L3O60292 1781 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-217ENST00000580654 CDCA8Q53HL2 280 aa10.58□□□□□ -0.72
SMARCE1-217ENST00000580654 USP50Q70EL3 339 aaPredicted RBP10.58□□□□□ -0.72
SMARCE1-217ENST00000580654 MARVELD3Q96A59 401 aa10.58□□□□□ -0.72
SMARCE1-217ENST00000580654 CELF2O95319 508 aaKnown RBP10.57□□□□□ -0.72
SMARCE1-217ENST00000580654 STARD3NLO95772 234 aa10.57□□□□□ -0.72
SMARCE1-217ENST00000580654 LMOD1P29536 600 aaPredicted RBP10.57□□□□□ -0.72
SMARCE1-217ENST00000580654 IL6STP40189 918 aaPredicted RBP10.57□□□□□ -0.72
SMARCE1-217ENST00000580654 ZNF330Q9Y3S2 320 aaPredicted RBP10.57□□□□□ -0.72
SMARCE1-217ENST00000580654 HEG1Q9ULI3 1381 aa10.56□□□□□ -0.72
SMARCE1-217ENST00000580654 NPHP1O15259 732 aa10.56□□□□□ -0.72
SMARCE1-217ENST00000580654 A1BGP04217 495 aa10.56□□□□□ -0.72
SMARCE1-217ENST00000580654 IL13P35225 146 aa10.56□□□□□ -0.72
SMARCE1-217ENST00000580654 EIF6P56537 245 aaKnown RBP10.56□□□□□ -0.72
SMARCE1-217ENST00000580654 SLC51AQ86UW1 340 aa10.56□□□□□ -0.72
SMARCE1-217ENST00000580654 ZNF496Q96IT1 587 aaPredicted RBP10.56□□□□□ -0.72
SMARCE1-217ENST00000580654 PSMD1Q99460 953 aa10.56□□□□□ -0.72
SMARCE1-217ENST00000580654 GLIS2Q9BZE0 524 aaPredicted RBP10.56□□□□□ -0.72
SMARCE1-217ENST00000580654 AKAP11Q9UKA4 1901 aa10.55□□□□□ -0.72
SMARCE1-217ENST00000580654 NBPF5PQ86XG9 351 aaPredicted RBP10.55□□□□□ -0.72
SMARCE1-217ENST00000580654 JDP2Q8WYK2 163 aa10.55□□□□□ -0.72
SMARCE1-217ENST00000580654 FAM155AB1AL88 458 aaPredicted RBP10.54□□□□□ -0.72
SMARCE1-217ENST00000580654 NOGQ13253 232 aa10.54□□□□□ -0.72
SMARCE1-217ENST00000580654 OCEL1Q9H607 264 aa10.54□□□□□ -0.72
SMARCE1-217ENST00000580654 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.54□□□□□ -0.72
SMARCE1-217ENST00000580654 PGAP2Q9UHJ9 254 aa10.54□□□□□ -0.72
SMARCE1-217ENST00000580654 MTHFSDQ2M296 383 aaKnown RBP10.53□□□□□ -0.72
SMARCE1-217ENST00000580654 HABP4Q5JVS0 413 aaKnown RBP10.53□□□□□ -0.72
SMARCE1-217ENST00000580654 DZIP3Q86Y13 1208 aaKnown RBP10.53□□□□□ -0.72
SMARCE1-217ENST00000580654 ZNF408Q9H9D4 720 aa10.53□□□□□ -0.72
SMARCE1-217ENST00000580654 ADARB2Q9NS39 739 aaKnown RBP10.53□□□□□ -0.72
SMARCE1-217ENST00000580654 SAGE1Q9NXZ1 904 aa10.53□□□□□ -0.72
SMARCE1-217ENST00000580654 GPRC5DQ9NZD1 345 aa10.53□□□□□ -0.72
SMARCE1-217ENST00000580654 ALDH1B1P30837 517 aa10.52□□□□□ -0.73
SMARCE1-217ENST00000580654 PIP4K2AP48426 406 aaPredicted RBP10.52□□□□□ -0.73
SMARCE1-217ENST00000580654 HIRAP54198 1017 aaPredicted RBP10.52□□□□□ -0.73
SMARCE1-217ENST00000580654 DLK2Q6UY11 383 aa10.52□□□□□ -0.73
SMARCE1-217ENST00000580654 TTC5Q8N0Z6 440 aa10.52□□□□□ -0.73
SMARCE1-217ENST00000580654 RNF186Q9NXI6 227 aa10.52□□□□□ -0.73
SMARCE1-217ENST00000580654 ZNF790Q6PG37 636 aa10.51□□□□□ -0.73
SMARCE1-217ENST00000580654 CLEC4GQ6UXB4 293 aa10.51□□□□□ -0.73
SMARCE1-217ENST00000580654 CTU1Q7Z7A3 348 aaKnown RBP10.51□□□□□ -0.73
SMARCE1-217ENST00000580654 LARGE2Q8N3Y3 721 aa10.51□□□□□ -0.73
SMARCE1-217ENST00000580654 NBPF15Q8N660 670 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms