RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 NLRP10Q86W26 655 aa18■□□□□ 0.47
SKA2-205ENST00000580541 CARMIL3Q8ND23 1372 aa18■□□□□ 0.47
SKA2-205ENST00000580541 BCORQ6W2J9 1755 aa17.99■□□□□ 0.47
SKA2-205ENST00000580541 IGKV5-2P06315 115 aa17.99■□□□□ 0.47
SKA2-205ENST00000580541 GNAI3P08754 354 aa17.99■□□□□ 0.47
SKA2-205ENST00000580541 NBPF5PQ86XG9 351 aaPredicted RBP17.99■□□□□ 0.47
SKA2-205ENST00000580541 TMEM57Q8N5G2 664 aa17.99■□□□□ 0.47
SKA2-205ENST00000580541 PANK1Q8TE04 598 aa17.99■□□□□ 0.47
SKA2-205ENST00000580541 TRMT112Q9UI30 125 aaKnown RBP17.99■□□□□ 0.47
SKA2-205ENST00000580541 AAMPQ13685 434 aa17.98■□□□□ 0.47
SKA2-205ENST00000580541 MVPQ14764 893 aaKnown RBP17.98■□□□□ 0.47
SKA2-205ENST00000580541 CWF19L2Q2TBE0 894 aaKnown RBP17.98■□□□□ 0.47
SKA2-205ENST00000580541 ZBTB38Q8NAP3 1195 aaPredicted RBP17.98■□□□□ 0.47
SKA2-205ENST00000580541 SCN7AQ01118 1682 aa17.98■□□□□ 0.47
SKA2-205ENST00000580541 GRM8O00222 908 aa17.97■□□□□ 0.47
SKA2-205ENST00000580541 SERPINB2P05120 415 aa17.97■□□□□ 0.47
SKA2-205ENST00000580541 PCCAP05165 728 aaPredicted RBP17.97■□□□□ 0.47
SKA2-205ENST00000580541 MMP10P09238 476 aa17.97■□□□□ 0.47
SKA2-205ENST00000580541 SH3TC1Q8TE82 1336 aa17.97■□□□□ 0.47
SKA2-205ENST00000580541 RLBP1P12271 317 aa17.96■□□□□ 0.47
SKA2-205ENST00000580541 ST5P78524 1137 aa17.96■□□□□ 0.47
SKA2-205ENST00000580541 SUSD4Q5VX71 490 aa17.96■□□□□ 0.47
SKA2-205ENST00000580541 MSL1Q68DK7 614 aa17.96■□□□□ 0.47
SKA2-205ENST00000580541 COG6Q9Y2V7 657 aa17.96■□□□□ 0.47
SKA2-205ENST00000580541 ANKRD36CQ5JPF3 1778 aa17.95■□□□□ 0.46
SKA2-205ENST00000580541 H7C1W4 665 aa17.95■□□□□ 0.46
SKA2-205ENST00000580541 ZBTB7AO95365 584 aa17.95■□□□□ 0.46
SKA2-205ENST00000580541 UBTFL1P0CB47 393 aaPredicted RBP17.95■□□□□ 0.46
SKA2-205ENST00000580541 CNBD1Q8NA66 436 aa17.95■□□□□ 0.46
SKA2-205ENST00000580541 PDGFDQ9GZP0 370 aaPredicted RBP17.95■□□□□ 0.46
SKA2-205ENST00000580541 SPON1Q9HCB6 807 aa17.95■□□□□ 0.46
SKA2-205ENST00000580541 TNNQ9UQP3 1299 aa17.95■□□□□ 0.46
SKA2-205ENST00000580541 UBN2Q6ZU65 1347 aa17.95■□□□□ 0.46
SKA2-205ENST00000580541 FAM177BA6PVY3 158 aa17.94■□□□□ 0.46
SKA2-205ENST00000580541 POLRMTO00411 1230 aaKnown RBP17.94■□□□□ 0.46
SKA2-205ENST00000580541 USP44Q9H0E7 712 aa17.94■□□□□ 0.46
SKA2-205ENST00000580541 ATF5Q9Y2D1 282 aaPredicted RBP17.94■□□□□ 0.46
SKA2-205ENST00000580541 ZBTB7BO15156 539 aaPredicted RBP17.93■□□□□ 0.46
SKA2-205ENST00000580541 C20orf194Q5TEA3 1177 aa17.93■□□□□ 0.46
SKA2-205ENST00000580541 FAM89AQ96GI7 184 aa17.93■□□□□ 0.46
SKA2-205ENST00000580541 UTYO14607 1347 aa17.93■□□□□ 0.46
SKA2-205ENST00000580541 AFDNP55196 1824 aaKnown RBP17.93■□□□□ 0.46
SKA2-205ENST00000580541 NTSR2O95665 410 aa17.92■□□□□ 0.46
SKA2-205ENST00000580541 SLC10A5Q5PT55 438 aa17.92■□□□□ 0.46
SKA2-205ENST00000580541 PPP4R3CPQ6ZMV5 832 aa17.92■□□□□ 0.46
SKA2-205ENST00000580541 UBE3BQ7Z3V4 1068 aa17.92■□□□□ 0.46
SKA2-205ENST00000580541 PDZRN3Q9UPQ7 1066 aa17.92■□□□□ 0.46
SKA2-205ENST00000580541 CDHR2Q9BYE9 1310 aa17.92■□□□□ 0.46
SKA2-205ENST00000580541 IRS4O14654 1257 aaPredicted RBP17.91■□□□□ 0.46
SKA2-205ENST00000580541 GNAI2P04899 355 aa17.91■□□□□ 0.46
SKA2-205ENST00000580541 DDR1Q08345 913 aa17.91■□□□□ 0.46
SKA2-205ENST00000580541 NLRP3Q96P20 1036 aa17.91■□□□□ 0.46
SKA2-205ENST00000580541 CASZ1Q86V15 1759 aa17.91■□□□□ 0.46
SKA2-205ENST00000580541 PDE8AO60658 829 aa17.9■□□□□ 0.46
SKA2-205ENST00000580541 MAPK8IP2Q13387 824 aaPredicted RBP17.9■□□□□ 0.46
SKA2-205ENST00000580541 BRIP1Q9BX63 1249 aa17.9■□□□□ 0.46
SKA2-205ENST00000580541 N4BP2Q86UW6 1770 aaPredicted RBP17.89■□□□□ 0.45
SKA2-205ENST00000580541 NBPF7P0C2Y1 421 aaPredicted RBP17.89■□□□□ 0.45
SKA2-205ENST00000580541 PDE6BP35913 854 aa17.89■□□□□ 0.45
SKA2-205ENST00000580541 ERFEQ4G0M1 354 aa17.89■□□□□ 0.45
SKA2-205ENST00000580541 RTL5Q5HYW3 569 aaPredicted RBP17.89■□□□□ 0.45
SKA2-205ENST00000580541 PRR5LQ6MZQ0 368 aa17.89■□□□□ 0.45
SKA2-205ENST00000580541 NUTM1Q86Y26 1132 aa17.89■□□□□ 0.45
SKA2-205ENST00000580541 CRBNQ96SW2 442 aa17.89■□□□□ 0.45
SKA2-205ENST00000580541 MEIS3Q99687 375 aa17.89■□□□□ 0.45
SKA2-205ENST00000580541 PLA2G12BQ9BX93 195 aa17.89■□□□□ 0.45
SKA2-205ENST00000580541 ZBTB40Q9NUA8 1239 aa17.88■□□□□ 0.45
SKA2-205ENST00000580541 CASP7P55210 303 aa17.87■□□□□ 0.45
SKA2-205ENST00000580541 ERICH6BQ5W0A0 696 aa17.87■□□□□ 0.45
SKA2-205ENST00000580541 HCLS1P14317 486 aaPredicted RBP17.86■□□□□ 0.45
SKA2-205ENST00000580541 CCDC152Q4G0S7 254 aa17.86■□□□□ 0.45
SKA2-205ENST00000580541 JARID2Q92833 1246 aaPredicted RBP17.86■□□□□ 0.45
SKA2-205ENST00000580541 COL24A1Q17RW2 1714 aa17.86■□□□□ 0.45
SKA2-205ENST00000580541 RPAP2Q8IXW5 612 aaPredicted RBP17.85■□□□□ 0.45
SKA2-205ENST00000580541 LRRFIP2Q9Y608 721 aaKnown RBP17.85■□□□□ 0.45
SKA2-205ENST00000580541 RIC1Q4ADV7 1423 aa17.84■□□□□ 0.45
SKA2-205ENST00000580541 H0YIN7 160 aa17.84■□□□□ 0.45
SKA2-205ENST00000580541 PTGER2P43116 358 aa17.84■□□□□ 0.45
SKA2-205ENST00000580541 CTSWP56202 376 aa17.84■□□□□ 0.45
SKA2-205ENST00000580541 SF3B3Q15393 1217 aaKnown RBP17.84■□□□□ 0.45
SKA2-205ENST00000580541 SYNE4Q8N205 404 aa17.84■□□□□ 0.45
SKA2-205ENST00000580541 SUCLG2Q96I99 432 aa17.84■□□□□ 0.45
SKA2-205ENST00000580541 SGIP1Q9BQI5 828 aa17.84■□□□□ 0.45
SKA2-205ENST00000580541 PPP1R1BQ9UD71 204 aaPredicted RBP17.84■□□□□ 0.45
SKA2-205ENST00000580541 CD2APQ9Y5K6 639 aa17.84■□□□□ 0.45
SKA2-205ENST00000580541 HMMRO75330 724 aa17.83■□□□□ 0.44
SKA2-205ENST00000580541 CSF1RP07333 972 aa17.83■□□□□ 0.44
SKA2-205ENST00000580541 TGFB2P61812 414 aa17.83■□□□□ 0.44
SKA2-205ENST00000580541 IRX6P78412 446 aaPredicted RBP17.83■□□□□ 0.44
SKA2-205ENST00000580541 CCDC57Q2TAC2 916 aa17.83■□□□□ 0.44
SKA2-205ENST00000580541 EXOC6Q8TAG9 804 aa17.83■□□□□ 0.44
SKA2-205ENST00000580541 RPGRQ92834 1020 aaKnown RBP17.83■□□□□ 0.44
SKA2-205ENST00000580541 BICC1Q9H694 974 aaKnown RBP17.83■□□□□ 0.44
SKA2-205ENST00000580541 NRXN2Q9P2S2 1712 aa17.82■□□□□ 0.44
SKA2-205ENST00000580541 KLRG2A4D1S0 409 aaPredicted RBP17.82■□□□□ 0.44
SKA2-205ENST00000580541 FOXO4P98177 505 aa17.82■□□□□ 0.44
SKA2-205ENST00000580541 RABL6Q3YEC7 729 aaPredicted RBP17.82■□□□□ 0.44
SKA2-205ENST00000580541 LMBR1LQ6UX01 489 aa17.82■□□□□ 0.44
SKA2-205ENST00000580541 DDX46Q7L014 1031 aaKnown RBP17.82■□□□□ 0.44
SKA2-205ENST00000580541 TTLL11Q8NHH1 800 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms