RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 IL6STP40189 918 aaPredicted RBP19.35■□□□□ 0.69
CSNK1D-213ENST00000580446 NIM1KQ8IY84 436 aa19.35■□□□□ 0.69
CSNK1D-213ENST00000580446 TTC5Q8N0Z6 440 aa19.35■□□□□ 0.69
CSNK1D-213ENST00000580446 ZNF157P51786 506 aaPredicted RBP19.33■□□□□ 0.68
CSNK1D-213ENST00000580446 AOC3Q16853 763 aa19.33■□□□□ 0.68
CSNK1D-213ENST00000580446 CSRNP1Q96S65 589 aa19.33■□□□□ 0.68
CSNK1D-213ENST00000580446 PPIP5K2O43314 1243 aa19.32■□□□□ 0.68
CSNK1D-213ENST00000580446 CXCL9Q07325 125 aa19.32■□□□□ 0.68
CSNK1D-213ENST00000580446 CDC37L1Q7L3B6 337 aa19.32■□□□□ 0.68
CSNK1D-213ENST00000580446 NPM2Q86SE8 214 aaKnown RBP19.32■□□□□ 0.68
CSNK1D-213ENST00000580446 NPC1L1Q9UHC9 1359 aa19.32■□□□□ 0.68
CSNK1D-213ENST00000580446 HEG1Q9ULI3 1381 aa19.32■□□□□ 0.68
CSNK1D-213ENST00000580446 ALDH1B1P30837 517 aa19.31■□□□□ 0.68
CSNK1D-213ENST00000580446 PGAP2Q9UHJ9 254 aa19.31■□□□□ 0.68
CSNK1D-213ENST00000580446 HDAC9Q9UKV0 1011 aa19.31■□□□□ 0.68
CSNK1D-213ENST00000580446 NIP7Q9Y221 180 aaKnown RBP eCLIP19.31■□□□□ 0.68
CSNK1D-213ENST00000580446 SLC24A1O60721 1099 aa19.3■□□□□ 0.68
CSNK1D-213ENST00000580446 HMOX1P09601 288 aa19.3■□□□□ 0.68
CSNK1D-213ENST00000580446 POLR3GLQ9BT43 218 aa19.3■□□□□ 0.68
CSNK1D-213ENST00000580446 ABCC12Q96J65 1359 aa19.3■□□□□ 0.68
CSNK1D-213ENST00000580446 UBR2Q8IWV8 1755 aa19.29■□□□□ 0.68
CSNK1D-213ENST00000580446 ADM5C9JUS6 153 aa19.29■□□□□ 0.68
CSNK1D-213ENST00000580446 RAD17O75943 681 aa19.29■□□□□ 0.68
CSNK1D-213ENST00000580446 TBC1D8O95759 1140 aa19.29■□□□□ 0.68
CSNK1D-213ENST00000580446 ZNF296Q8WUU4 475 aaPredicted RBP19.29■□□□□ 0.68
CSNK1D-213ENST00000580446 BCL2L13Q9BXK5 485 aa19.29■□□□□ 0.68
CSNK1D-213ENST00000580446 GBA2Q9HCG7 927 aaPredicted RBP19.29■□□□□ 0.68
CSNK1D-213ENST00000580446 COLQQ9Y215 455 aaPredicted RBP19.29■□□□□ 0.68
CSNK1D-213ENST00000580446 POTEFA5A3E0 1075 aa19.28■□□□□ 0.68
CSNK1D-213ENST00000580446 MTHFSDQ2M296 383 aaKnown RBP19.28■□□□□ 0.68
CSNK1D-213ENST00000580446 TPTE2Q6XPS3 522 aa19.28■□□□□ 0.68
CSNK1D-213ENST00000580446 NUTM1Q86Y26 1132 aa19.28■□□□□ 0.68
CSNK1D-213ENST00000580446 PRAMEF22A3QJZ6 481 aa19.27■□□□□ 0.68
CSNK1D-213ENST00000580446 KCNQ3O43525 872 aa19.27■□□□□ 0.68
CSNK1D-213ENST00000580446 CCDC102AQ96A19 550 aa19.27■□□□□ 0.68
CSNK1D-213ENST00000580446 SLC10A3P09131 477 aa19.26■□□□□ 0.67
CSNK1D-213ENST00000580446 GTF2E1P29083 439 aaPredicted RBP19.26■□□□□ 0.67
CSNK1D-213ENST00000580446 IL13P35225 146 aa19.26■□□□□ 0.67
CSNK1D-213ENST00000580446 SLC17A8Q8NDX2 589 aa19.26■□□□□ 0.67
CSNK1D-213ENST00000580446 EGFRP00533 1210 aa19.25■□□□□ 0.67
CSNK1D-213ENST00000580446 CDCA8Q53HL2 280 aa19.25■□□□□ 0.67
CSNK1D-213ENST00000580446 ZNF790Q6PG37 636 aa19.25■□□□□ 0.67
CSNK1D-213ENST00000580446 C2orf69Q8N8R5 385 aa19.25■□□□□ 0.67
CSNK1D-213ENST00000580446 CUL9Q8IWT3 2517 aa19.25■□□□□ 0.67
CSNK1D-213ENST00000580446 MKI67P46013 3256 aaKnown RBP19.25■□□□□ 0.67
CSNK1D-213ENST00000580446 PPEF1O14829 653 aaPredicted RBP19.24■□□□□ 0.67
CSNK1D-213ENST00000580446 SAMD7Q7Z3H4 446 aa19.24■□□□□ 0.67
CSNK1D-213ENST00000580446 KRT26Q7Z3Y9 468 aa19.24■□□□□ 0.67
CSNK1D-213ENST00000580446 ZC3H15Q8WU90 426 aaKnown RBP19.24■□□□□ 0.67
CSNK1D-213ENST00000580446 RPGRQ92834 1020 aaKnown RBP19.24■□□□□ 0.67
CSNK1D-213ENST00000580446 ZNRF3Q9ULT6 936 aa19.24■□□□□ 0.67
CSNK1D-213ENST00000580446 PKN2Q16513 984 aaKnown RBP19.23■□□□□ 0.67
CSNK1D-213ENST00000580446 HLFQ16534 295 aa19.23■□□□□ 0.67
CSNK1D-213ENST00000580446 CNOT7Q9UIV1 285 aaKnown RBP19.23■□□□□ 0.67
CSNK1D-213ENST00000580446 USP16Q9Y5T5 823 aa19.23■□□□□ 0.67
CSNK1D-213ENST00000580446 CRY2Q49AN0 593 aa19.22■□□□□ 0.67
CSNK1D-213ENST00000580446 TBC1D10BQ4KMP7 808 aaPredicted RBP19.22■□□□□ 0.67
CSNK1D-213ENST00000580446 CC2D2BQ6DHV5 1058 aa19.22■□□□□ 0.67
CSNK1D-213ENST00000580446 FBXO46Q6PJ61 603 aaPredicted RBP19.22■□□□□ 0.67
CSNK1D-213ENST00000580446 C3orf67Q6ZVT6 689 aa19.22■□□□□ 0.67
CSNK1D-213ENST00000580446 MICALL2Q8IY33 904 aa19.22■□□□□ 0.67
CSNK1D-213ENST00000580446 TEX13AQ9BXU3 409 aaPredicted RBP19.22■□□□□ 0.67
CSNK1D-213ENST00000580446 ZNF652Q9Y2D9 606 aa19.22■□□□□ 0.67
CSNK1D-213ENST00000580446 ZBTB12Q9Y330 459 aaPredicted RBP19.22■□□□□ 0.67
CSNK1D-213ENST00000580446 SZT2Q5T011 3432 aa19.22■□□□□ 0.67
CSNK1D-213ENST00000580446 RBM26Q5T8P6 1007 aaKnown RBP19.21■□□□□ 0.67
CSNK1D-213ENST00000580446 RASAL3Q86YV0 1011 aa19.21■□□□□ 0.67
CSNK1D-213ENST00000580446 TRIOBPQ9H2D6 2365 aa19.21■□□□□ 0.67
CSNK1D-213ENST00000580446 CLEC4GQ6UXB4 293 aa19.2■□□□□ 0.66
CSNK1D-213ENST00000580446 FMNL2Q96PY5 1086 aa19.2■□□□□ 0.66
CSNK1D-213ENST00000580446 TEFQ10587 303 aa19.19■□□□□ 0.66
CSNK1D-213ENST00000580446 IL17REQ8NFR9 667 aa19.18■□□□□ 0.66
CSNK1D-213ENST00000580446 R3HDMLQ9H3Y0 253 aa19.18■□□□□ 0.66
CSNK1D-213ENST00000580446 ASTN2O75129 1339 aaPredicted RBP19.18■□□□□ 0.66
CSNK1D-213ENST00000580446 A0A0C4DFX4 3053 aa19.16■□□□□ 0.66
CSNK1D-213ENST00000580446 YDJCA8MPS7 323 aa19.16■□□□□ 0.66
CSNK1D-213ENST00000580446 NBPF26B4DH59 902 aa19.16■□□□□ 0.66
CSNK1D-213ENST00000580446 H7C1D1 291 aa19.16■□□□□ 0.66
CSNK1D-213ENST00000580446 GPR25O00155 361 aa19.16■□□□□ 0.66
CSNK1D-213ENST00000580446 EN2P19622 333 aaPredicted RBP19.16■□□□□ 0.66
CSNK1D-213ENST00000580446 MKRN3Q13064 507 aaKnown RBP19.16■□□□□ 0.66
CSNK1D-213ENST00000580446 NBPF10Q6P3W6 841 aaKnown RBP19.16■□□□□ 0.66
CSNK1D-213ENST00000580446 MOB2Q70IA6 237 aa19.16■□□□□ 0.66
CSNK1D-213ENST00000580446 MORC1Q86VD1 984 aa19.16■□□□□ 0.66
CSNK1D-213ENST00000580446 AKAP11Q9UKA4 1901 aa19.15■□□□□ 0.66
CSNK1D-213ENST00000580446 GPTP24298 496 aa19.15■□□□□ 0.66
CSNK1D-213ENST00000580446 HOXA10P31260 410 aaPredicted RBP19.15■□□□□ 0.66
CSNK1D-213ENST00000580446 NGEFQ8N5V2 710 aa19.14■□□□□ 0.65
CSNK1D-213ENST00000580446 RBM17Q96I25 401 aaKnown RBP19.14■□□□□ 0.65
CSNK1D-213ENST00000580446 CDHR2Q9BYE9 1310 aa19.14■□□□□ 0.65
CSNK1D-213ENST00000580446 TNIP1Q15025 636 aa19.13■□□□□ 0.65
CSNK1D-213ENST00000580446 DCPSQ96C86 337 aaKnown RBP19.13■□□□□ 0.65
CSNK1D-213ENST00000580446 CDCA5Q96FF9 252 aa19.13■□□□□ 0.65
CSNK1D-213ENST00000580446 HTTP42858 3142 aa19.13■□□□□ 0.65
CSNK1D-213ENST00000580446 RIC1Q4ADV7 1423 aa19.12■□□□□ 0.65
CSNK1D-213ENST00000580446 SCAF8Q9UPN6 1271 aaKnown RBP19.12■□□□□ 0.65
CSNK1D-213ENST00000580446 H0YGN5 161 aa19.11■□□□□ 0.65
CSNK1D-213ENST00000580446 DPP8Q6V1X1 898 aaPredicted RBP19.11■□□□□ 0.65
CSNK1D-213ENST00000580446 CRAMP1Q96RY5 1269 aa19.11■□□□□ 0.65
CSNK1D-213ENST00000580446 GGA3Q9NZ52 723 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms