RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 LARGE2Q8N3Y3 721 aa18.75■□□□□ 0.59
CSNK1D-211ENST00000579316 GPRC5DQ9NZD1 345 aa18.75■□□□□ 0.59
CSNK1D-211ENST00000579316 PGAP2Q9UHJ9 254 aa18.75■□□□□ 0.59
CSNK1D-211ENST00000579316 USP16Q9Y5T5 823 aa18.75■□□□□ 0.59
CSNK1D-211ENST00000579316 HOXA10P31260 410 aaPredicted RBP18.74■□□□□ 0.59
CSNK1D-211ENST00000579316 NOGQ13253 232 aa18.74■□□□□ 0.59
CSNK1D-211ENST00000579316 GAS2L2Q8NHY3 880 aa18.74■□□□□ 0.59
CSNK1D-211ENST00000579316 RIC1Q4ADV7 1423 aa18.74■□□□□ 0.59
CSNK1D-211ENST00000579316 ABCC12Q96J65 1359 aa18.73■□□□□ 0.59
CSNK1D-211ENST00000579316 KCNQ3O43525 872 aa18.73■□□□□ 0.59
CSNK1D-211ENST00000579316 DIAPH1O60610 1272 aaKnown RBP18.73■□□□□ 0.59
CSNK1D-211ENST00000579316 PIP4K2AP48426 406 aaPredicted RBP18.73■□□□□ 0.59
CSNK1D-211ENST00000579316 AMER1Q5JTC6 1135 aaPredicted RBP18.73■□□□□ 0.59
CSNK1D-211ENST00000579316 KNSTRNQ9Y448 316 aa18.73■□□□□ 0.59
CSNK1D-211ENST00000579316 SOX10P56693 466 aa18.72■□□□□ 0.59
CSNK1D-211ENST00000579316 GLIS2Q9BZE0 524 aaPredicted RBP18.72■□□□□ 0.59
CSNK1D-211ENST00000579316 SAGE1Q9NXZ1 904 aa18.72■□□□□ 0.59
CSNK1D-211ENST00000579316 KIF7Q2M1P5 1343 aa18.72■□□□□ 0.59
CSNK1D-211ENST00000579316 NIM1KQ8IY84 436 aa18.71■□□□□ 0.59
CSNK1D-211ENST00000579316 ZC3H15Q8WU90 426 aaKnown RBP18.71■□□□□ 0.59
CSNK1D-211ENST00000579316 TIMELESSQ9UNS1 1208 aa18.71■□□□□ 0.59
CSNK1D-211ENST00000579316 CDHR2Q9BYE9 1310 aa18.71■□□□□ 0.59
CSNK1D-211ENST00000579316 BTBD11A6QL63 1104 aa18.7■□□□□ 0.58
CSNK1D-211ENST00000579316 NBPF26B4DH59 902 aa18.7■□□□□ 0.58
CSNK1D-211ENST00000579316 NBPF10Q6P3W6 841 aaKnown RBP18.7■□□□□ 0.58
CSNK1D-211ENST00000579316 NBPF15Q8N660 670 aa18.7■□□□□ 0.58
CSNK1D-211ENST00000579316 ZIC5Q96T25 663 aa18.7■□□□□ 0.58
CSNK1D-211ENST00000579316 VPS33BQ9H267 617 aa18.7■□□□□ 0.58
CSNK1D-211ENST00000579316 NPC1L1Q9UHC9 1359 aa18.69■□□□□ 0.58
CSNK1D-211ENST00000579316 PRAMEF22A3QJZ6 481 aa18.69■□□□□ 0.58
CSNK1D-211ENST00000579316 FAM177BA6PVY3 158 aa18.69■□□□□ 0.58
CSNK1D-211ENST00000579316 SNRPA1P09661 255 aaKnown RBP18.69■□□□□ 0.58
CSNK1D-211ENST00000579316 GTF2E1P29083 439 aaPredicted RBP18.69■□□□□ 0.58
CSNK1D-211ENST00000579316 NYXQ9GZU5 481 aa18.69■□□□□ 0.58
CSNK1D-211ENST00000579316 COL3A1P02461 1466 aaPredicted RBP18.69■□□□□ 0.58
CSNK1D-211ENST00000579316 HLFQ16534 295 aa18.68■□□□□ 0.58
CSNK1D-211ENST00000579316 PCGF6Q9BYE7 350 aa18.68■□□□□ 0.58
CSNK1D-211ENST00000579316 IBTKQ9P2D0 1353 aaPredicted RBP18.68■□□□□ 0.58
CSNK1D-211ENST00000579316 PPIP5K2O43314 1243 aa18.67■□□□□ 0.58
CSNK1D-211ENST00000579316 CXCL9Q07325 125 aa18.67■□□□□ 0.58
CSNK1D-211ENST00000579316 CDC37L1Q7L3B6 337 aa18.67■□□□□ 0.58
CSNK1D-211ENST00000579316 RPGRQ92834 1020 aaKnown RBP18.67■□□□□ 0.58
CSNK1D-211ENST00000579316 CRAMP1Q96RY5 1269 aa18.67■□□□□ 0.58
CSNK1D-211ENST00000579316 FAM155AB1AL88 458 aaPredicted RBP18.66■□□□□ 0.58
CSNK1D-211ENST00000579316 GMPSP49915 693 aaPredicted RBP18.66■□□□□ 0.58
CSNK1D-211ENST00000579316 SLC51AQ86UW1 340 aa18.66■□□□□ 0.58
CSNK1D-211ENST00000579316 ZNRF3Q9ULT6 936 aa18.66■□□□□ 0.58
CSNK1D-211ENST00000579316 PPEF1O14829 653 aaPredicted RBP18.65■□□□□ 0.58
CSNK1D-211ENST00000579316 HIRAP54198 1017 aaPredicted RBP18.65■□□□□ 0.58
CSNK1D-211ENST00000579316 HUNKP57058 714 aa18.65■□□□□ 0.58
CSNK1D-211ENST00000579316 NUTM1Q86Y26 1132 aa18.65■□□□□ 0.58
CSNK1D-211ENST00000579316 ZNF408Q9H9D4 720 aa18.65■□□□□ 0.58
CSNK1D-211ENST00000579316 EIF4G2P78344 907 aaKnown RBP eCLIP18.64■□□□□ 0.57
CSNK1D-211ENST00000579316 AOC3Q16853 763 aa18.64■□□□□ 0.57
CSNK1D-211ENST00000579316 ERVV-1B6SEH8 477 aa18.63■□□□□ 0.57
CSNK1D-211ENST00000579316 HSPA5P11021 654 aaKnown RBP18.63■□□□□ 0.57
CSNK1D-211ENST00000579316 RBM17Q96I25 401 aaKnown RBP18.63■□□□□ 0.57
CSNK1D-211ENST00000579316 RTFDC1Q9BY42 306 aaPredicted RBP18.63■□□□□ 0.57
CSNK1D-211ENST00000579316 RGMBQ6NW40 437 aa18.62■□□□□ 0.57
CSNK1D-211ENST00000579316 CTU1Q7Z7A3 348 aaKnown RBP18.62■□□□□ 0.57
CSNK1D-211ENST00000579316 TRPM4Q8TD43 1214 aa18.62■□□□□ 0.57
CSNK1D-211ENST00000579316 NUP98P52948 1817 aa18.61■□□□□ 0.57
CSNK1D-211ENST00000579316 SUPT20HQ8NEM7 779 aa18.61■□□□□ 0.57
CSNK1D-211ENST00000579316 CCDC102AQ96A19 550 aa18.61■□□□□ 0.57
CSNK1D-211ENST00000579316 RNF186Q9NXI6 227 aa18.61■□□□□ 0.57
CSNK1D-211ENST00000579316 ATP6V0A2Q9Y487 856 aa18.61■□□□□ 0.57
CSNK1D-211ENST00000579316 LAMB4A4D0S4 1761 aa18.6■□□□□ 0.57
CSNK1D-211ENST00000579316 KIF23Q02241 960 aaPredicted RBP18.6■□□□□ 0.57
CSNK1D-211ENST00000579316 AKAP11Q9UKA4 1901 aa18.59■□□□□ 0.57
CSNK1D-211ENST00000579316 UBN2Q6ZU65 1347 aa18.59■□□□□ 0.57
CSNK1D-211ENST00000579316 U2SURPO15042 1029 aaKnown RBP18.59■□□□□ 0.57
CSNK1D-211ENST00000579316 TRPA1O75762 1119 aa18.59■□□□□ 0.57
CSNK1D-211ENST00000579316 TNIP1Q15025 636 aa18.59■□□□□ 0.57
CSNK1D-211ENST00000579316 USP48Q86UV5 1035 aa18.59■□□□□ 0.57
CSNK1D-211ENST00000579316 PHACTR3Q96KR7 559 aa18.59■□□□□ 0.57
CSNK1D-211ENST00000579316 MAP3K15Q6ZN16 1313 aa18.58■□□□□ 0.57
CSNK1D-211ENST00000579316 TCERG1O14776 1098 aaKnown RBP18.58■□□□□ 0.56
CSNK1D-211ENST00000579316 KIAA2012Q0VF49 1180 aa18.58■□□□□ 0.56
CSNK1D-211ENST00000579316 C3orf67Q6ZVT6 689 aa18.58■□□□□ 0.56
CSNK1D-211ENST00000579316 GCC1Q96CN9 775 aa18.58■□□□□ 0.56
CSNK1D-211ENST00000579316 BCL2L13Q9BXK5 485 aa18.58■□□□□ 0.56
CSNK1D-211ENST00000579316 TMX4Q9H1E5 349 aaPredicted RBP18.58■□□□□ 0.56
CSNK1D-211ENST00000579316 GBA2Q9HCG7 927 aaPredicted RBP18.57■□□□□ 0.56
CSNK1D-211ENST00000579316 CNOT7Q9UIV1 285 aaKnown RBP18.57■□□□□ 0.56
CSNK1D-211ENST00000579316 HPS5Q9UPZ3 1129 aa18.57■□□□□ 0.56
CSNK1D-211ENST00000579316 NTSR2O95665 410 aa18.56■□□□□ 0.56
CSNK1D-211ENST00000579316 SUSD4Q5VX71 490 aa18.56■□□□□ 0.56
CSNK1D-211ENST00000579316 SHTN1A0MZ66 631 aa18.55■□□□□ 0.56
CSNK1D-211ENST00000579316 H7C1D1 291 aa18.55■□□□□ 0.56
CSNK1D-211ENST00000579316 RAD17O75943 681 aa18.55■□□□□ 0.56
CSNK1D-211ENST00000579316 SLC10A3P09131 477 aa18.55■□□□□ 0.56
CSNK1D-211ENST00000579316 PKN2Q16513 984 aaKnown RBP18.55■□□□□ 0.56
CSNK1D-211ENST00000579316 DLK2Q6UY11 383 aa18.55■□□□□ 0.56
CSNK1D-211ENST00000579316 ZNF34Q8IZ26 560 aa18.55■□□□□ 0.56
CSNK1D-211ENST00000579316 C2orf69Q8N8R5 385 aa18.55■□□□□ 0.56
CSNK1D-211ENST00000579316 CSRNP1Q96S65 589 aa18.55■□□□□ 0.56
CSNK1D-211ENST00000579316 ABCC4O15439 1325 aa18.54■□□□□ 0.56
CSNK1D-211ENST00000579316 PER1O15534 1290 aaPredicted RBP18.54■□□□□ 0.56
CSNK1D-211ENST00000579316 GPTP24298 496 aa18.54■□□□□ 0.56
CSNK1D-211ENST00000579316 PRKAR2BP31323 418 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms