RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 JDP2Q8WYK2 163 aa8.57□□□□□ -1.04
UBB-208ENST00000578706 PSMD1Q99460 953 aa8.57□□□□□ -1.04
UBB-208ENST00000578706 SLC52A2Q9HAB3 445 aa8.57□□□□□ -1.04
UBB-208ENST00000578706 ADARB2Q9NS39 739 aaKnown RBP8.57□□□□□ -1.04
UBB-208ENST00000578706 GPRC5DQ9NZD1 345 aa8.57□□□□□ -1.04
UBB-208ENST00000578706 POTEFA5A3E0 1075 aa8.56□□□□□ -1.04
UBB-208ENST00000578706 AMOTQ4VCS5 1084 aa8.56□□□□□ -1.04
UBB-208ENST00000578706 RGMBQ6NW40 437 aa8.56□□□□□ -1.04
UBB-208ENST00000578706 SLC17A8Q8NDX2 589 aa8.56□□□□□ -1.04
UBB-208ENST00000578706 CSRNP1Q96S65 589 aa8.56□□□□□ -1.04
UBB-208ENST00000578706 LGR6Q9HBX8 967 aa8.56□□□□□ -1.04
UBB-208ENST00000578706 SHTN1A0MZ66 631 aa8.55□□□□□ -1.04
UBB-208ENST00000578706 CDCA8Q53HL2 280 aa8.55□□□□□ -1.04
UBB-208ENST00000578706 C1orf141Q5JVX7 400 aa8.55□□□□□ -1.04
UBB-208ENST00000578706 VSIG10Q8N0Z9 540 aa8.55□□□□□ -1.04
UBB-208ENST00000578706 TRPM4Q8TD43 1214 aa8.55□□□□□ -1.04
UBB-208ENST00000578706 SETDB2Q96T68 719 aa8.55□□□□□ -1.04
UBB-208ENST00000578706 A0A087WZG4 1122 aa8.54□□□□□ -1.04
UBB-208ENST00000578706 SLC10A3P09131 477 aa8.54□□□□□ -1.04
UBB-208ENST00000578706 PKN2Q16513 984 aaKnown RBP8.54□□□□□ -1.04
UBB-208ENST00000578706 ZNF296Q8WUU4 475 aaPredicted RBP8.54□□□□□ -1.04
UBB-208ENST00000578706 UNC80Q8N2C7 3258 aa8.54□□□□□ -1.04
UBB-208ENST00000578706 SIPA1L3O60292 1781 aaPredicted RBP8.53□□□□□ -1.04
UBB-208ENST00000578706 NPC1L1Q9UHC9 1359 aa8.53□□□□□ -1.04
UBB-208ENST00000578706 GMPSP49915 693 aaPredicted RBP8.53□□□□□ -1.04
UBB-208ENST00000578706 CXCL9Q07325 125 aa8.53□□□□□ -1.04
UBB-208ENST00000578706 FBXO46Q6PJ61 603 aaPredicted RBP8.53□□□□□ -1.04
UBB-208ENST00000578706 CDC37L1Q7L3B6 337 aa8.53□□□□□ -1.04
UBB-208ENST00000578706 USP48Q86UV5 1035 aa8.53□□□□□ -1.04
UBB-208ENST00000578706 LARGE2Q8N3Y3 721 aa8.53□□□□□ -1.04
UBB-208ENST00000578706 LAMA3Q16787 3333 aa8.53□□□□□ -1.04
UBB-208ENST00000578706 NPHP1O15259 732 aa8.52□□□□□ -1.05
UBB-208ENST00000578706 IL6STP40189 918 aaPredicted RBP8.52□□□□□ -1.05
UBB-208ENST00000578706 NBPF5PQ86XG9 351 aaPredicted RBP8.52□□□□□ -1.05
UBB-208ENST00000578706 ZC3H15Q8WU90 426 aaKnown RBP8.52□□□□□ -1.05
UBB-208ENST00000578706 CCDC102AQ96A19 550 aa8.52□□□□□ -1.05
UBB-208ENST00000578706 OTUD5Q96G74 571 aa8.52□□□□□ -1.05
UBB-208ENST00000578706 GBA2Q9HCG7 927 aaPredicted RBP8.52□□□□□ -1.05
UBB-208ENST00000578706 ZNF330Q9Y3S2 320 aaPredicted RBP8.52□□□□□ -1.05
UBB-208ENST00000578706 ABCC12Q96J65 1359 aa8.51□□□□□ -1.05
UBB-208ENST00000578706 RNMTO43148 476 aaKnown RBP8.51□□□□□ -1.05
UBB-208ENST00000578706 STARD3NLO95772 234 aa8.51□□□□□ -1.05
UBB-208ENST00000578706 ZNF157P51786 506 aaPredicted RBP8.51□□□□□ -1.05
UBB-208ENST00000578706 CRY2Q49AN0 593 aa8.51□□□□□ -1.05
UBB-208ENST00000578706 ZNF496Q96IT1 587 aaPredicted RBP8.51□□□□□ -1.05
UBB-208ENST00000578706 PITPNM2Q9BZ72 1349 aa8.51□□□□□ -1.05
UBB-208ENST00000578706 HEG1Q9ULI3 1381 aa8.5□□□□□ -1.05
UBB-208ENST00000578706 ADM5C9JUS6 153 aa8.5□□□□□ -1.05
UBB-208ENST00000578706 TBC1D8O95759 1140 aa8.5□□□□□ -1.05
UBB-208ENST00000578706 EGFRP00533 1210 aa8.5□□□□□ -1.05
UBB-208ENST00000578706 A1BGP04217 495 aa8.5□□□□□ -1.05
UBB-208ENST00000578706 TNNT2P45379 298 aaPredicted RBP8.5□□□□□ -1.05
UBB-208ENST00000578706 RIC1Q4ADV7 1423 aa8.5□□□□□ -1.05
UBB-208ENST00000578706 RASAL3Q86YV0 1011 aa8.5□□□□□ -1.05
UBB-208ENST00000578706 NIM1KQ8IY84 436 aa8.5□□□□□ -1.05
UBB-208ENST00000578706 HDAC9Q9UKV0 1011 aa8.5□□□□□ -1.05
UBB-208ENST00000578706 CDHR2Q9BYE9 1310 aa8.5□□□□□ -1.05
UBB-208ENST00000578706 CENPBP07199 599 aaPredicted RBP8.49□□□□□ -1.05
UBB-208ENST00000578706 EN2P19622 333 aaPredicted RBP8.49□□□□□ -1.05
UBB-208ENST00000578706 ALDH1B1P30837 517 aa8.49□□□□□ -1.05
UBB-208ENST00000578706 PIP4K2AP48426 406 aaPredicted RBP8.49□□□□□ -1.05
UBB-208ENST00000578706 AOC3Q16853 763 aa8.49□□□□□ -1.05
UBB-208ENST00000578706 NCBP3Q53F19 620 aaKnown RBP8.49□□□□□ -1.05
UBB-208ENST00000578706 CC2D2BQ6DHV5 1058 aa8.49□□□□□ -1.05
UBB-208ENST00000578706 SULT6B1Q6IMI4 303 aa8.49□□□□□ -1.05
UBB-208ENST00000578706 DZIP3Q86Y13 1208 aaKnown RBP8.49□□□□□ -1.05
UBB-208ENST00000578706 R3HDMLQ9H3Y0 253 aa8.49□□□□□ -1.05
UBB-208ENST00000578706 H0YGN5 161 aa8.48□□□□□ -1.05
UBB-208ENST00000578706 GPR25O00155 361 aa8.48□□□□□ -1.05
UBB-208ENST00000578706 PPIP5K2O43314 1243 aa8.48□□□□□ -1.05
UBB-208ENST00000578706 MNX1P50219 401 aaPredicted RBP8.48□□□□□ -1.05
UBB-208ENST00000578706 NOM1Q5C9Z4 860 aaKnown RBP8.48□□□□□ -1.05
UBB-208ENST00000578706 KRT26Q7Z3Y9 468 aa8.48□□□□□ -1.05
UBB-208ENST00000578706 MIER1Q8N108 512 aa8.48□□□□□ -1.05
UBB-208ENST00000578706 PIAS4Q8N2W9 510 aaPredicted RBP8.48□□□□□ -1.05
UBB-208ENST00000578706 C2orf69Q8N8R5 385 aa8.48□□□□□ -1.05
UBB-208ENST00000578706 ZNRF3Q9ULT6 936 aa8.48□□□□□ -1.05
UBB-208ENST00000578706 KDM3BQ7LBC6 1761 aa8.48□□□□□ -1.05
UBB-208ENST00000578706 DUOX1Q9NRD9 1551 aa8.48□□□□□ -1.05
UBB-208ENST00000578706 VCANP13611 3396 aa8.47□□□□□ -1.05
UBB-208ENST00000578706 SPTBN5Q9NRC6 3674 aaKnown RBP8.47□□□□□ -1.05
UBB-208ENST00000578706 FAM177BA6PVY3 158 aa8.47□□□□□ -1.05
UBB-208ENST00000578706 HOXA10P31260 410 aaPredicted RBP8.47□□□□□ -1.05
UBB-208ENST00000578706 CLEC4GQ6UXB4 293 aa8.47□□□□□ -1.05
UBB-208ENST00000578706 SAMD7Q7Z3H4 446 aa8.47□□□□□ -1.05
UBB-208ENST00000578706 RBM27Q9P2N5 1060 aaKnown RBP8.47□□□□□ -1.05
UBB-208ENST00000578706 CNOT7Q9UIV1 285 aaKnown RBP8.47□□□□□ -1.05
UBB-208ENST00000578706 YDJCA8MPS7 323 aa8.46□□□□□ -1.06
UBB-208ENST00000578706 RAD17O75943 681 aa8.46□□□□□ -1.06
UBB-208ENST00000578706 CHRDL2Q6WN34 429 aa8.46□□□□□ -1.06
UBB-208ENST00000578706 TPTE2Q6XPS3 522 aa8.46□□□□□ -1.06
UBB-208ENST00000578706 C3orf67Q6ZVT6 689 aa8.46□□□□□ -1.06
UBB-208ENST00000578706 MICALL2Q8IY33 904 aa8.46□□□□□ -1.06
UBB-208ENST00000578706 NIP7Q9Y221 180 aaKnown RBP eCLIP8.46□□□□□ -1.06
UBB-208ENST00000578706 ASTN2O75129 1339 aaPredicted RBP8.46□□□□□ -1.06
UBB-208ENST00000578706 NUP98P52948 1817 aa8.45□□□□□ -1.06
UBB-208ENST00000578706 PRAMEF22A3QJZ6 481 aa8.45□□□□□ -1.06
UBB-208ENST00000578706 TCERG1O14776 1098 aaKnown RBP8.45□□□□□ -1.06
UBB-208ENST00000578706 IL13P35225 146 aa8.45□□□□□ -1.06
UBB-208ENST00000578706 ZNF790Q6PG37 636 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms