RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 ZNF296Q8WUU4 475 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-209ENST00000578663 C7orf43Q8WVR3 580 aa9.83□□□□□ -0.84
CDK5RAP3-209ENST00000578663 MASTLQ96GX5 879 aa9.83□□□□□ -0.84
CDK5RAP3-209ENST00000578663 EN2P19622 333 aaPredicted RBP9.82□□□□□ -0.84
CDK5RAP3-209ENST00000578663 SCNN1DP51172 638 aa9.82□□□□□ -0.84
CDK5RAP3-209ENST00000578663 ST5P78524 1137 aa9.82□□□□□ -0.84
CDK5RAP3-209ENST00000578663 FKBP4Q02790 459 aaKnown RBP eCLIP9.82□□□□□ -0.84
CDK5RAP3-209ENST00000578663 LRCH3Q96II8 777 aa9.82□□□□□ -0.84
CDK5RAP3-209ENST00000578663 CSRNP1Q96S65 589 aa9.82□□□□□ -0.84
CDK5RAP3-209ENST00000578663 GLIS2Q9BZE0 524 aaPredicted RBP9.82□□□□□ -0.84
CDK5RAP3-209ENST00000578663 ZNF277Q9NRM2 450 aaPredicted RBP9.82□□□□□ -0.84
CDK5RAP3-209ENST00000578663 EYSQ5T1H1 3165 aa9.81□□□□□ -0.84
CDK5RAP3-209ENST00000578663 RNMTO43148 476 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-209ENST00000578663 TNNT2P45379 298 aaPredicted RBP9.81□□□□□ -0.84
CDK5RAP3-209ENST00000578663 SULT6B1Q6IMI4 303 aa9.81□□□□□ -0.84
CDK5RAP3-209ENST00000578663 HDAC9Q9UKV0 1011 aa9.81□□□□□ -0.84
CDK5RAP3-209ENST00000578663 LAMA2P24043 3122 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-209ENST00000578663 CANXP27824 592 aaKnown RBP9.8□□□□□ -0.84
CDK5RAP3-209ENST00000578663 IL6STP40189 918 aaPredicted RBP9.8□□□□□ -0.84
CDK5RAP3-209ENST00000578663 HUNKP57058 714 aa9.8□□□□□ -0.84
CDK5RAP3-209ENST00000578663 SLC39A6Q13433 755 aa9.8□□□□□ -0.84
CDK5RAP3-209ENST00000578663 USP50Q70EL3 339 aaPredicted RBP9.8□□□□□ -0.84
CDK5RAP3-209ENST00000578663 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.8□□□□□ -0.84
CDK5RAP3-209ENST00000578663 RTKN2Q8IZC4 609 aa9.8□□□□□ -0.84
CDK5RAP3-209ENST00000578663 SETDB2Q96T68 719 aa9.8□□□□□ -0.84
CDK5RAP3-209ENST00000578663 TEX13AQ9BXU3 409 aaPredicted RBP9.8□□□□□ -0.84
CDK5RAP3-209ENST00000578663 ZNF408Q9H9D4 720 aa9.8□□□□□ -0.84
CDK5RAP3-209ENST00000578663 KLRG2A4D1S0 409 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP3-209ENST00000578663 NPR1P16066 1061 aa9.79□□□□□ -0.84
CDK5RAP3-209ENST00000578663 RGMBQ6NW40 437 aa9.79□□□□□ -0.84
CDK5RAP3-209ENST00000578663 CCDC24Q8N4L8 307 aa9.79□□□□□ -0.84
CDK5RAP3-209ENST00000578663 SNED1Q8TER0 1413 aa9.79□□□□□ -0.84
CDK5RAP3-209ENST00000578663 CLSPNQ9HAW4 1339 aa9.79□□□□□ -0.84
CDK5RAP3-209ENST00000578663 HEG1Q9ULI3 1381 aa9.78□□□□□ -0.84
CDK5RAP3-209ENST00000578663 RGL2O15211 777 aa9.78□□□□□ -0.84
CDK5RAP3-209ENST00000578663 NPHP1O15259 732 aa9.78□□□□□ -0.84
CDK5RAP3-209ENST00000578663 CAMTA2O94983 1202 aa9.78□□□□□ -0.84
CDK5RAP3-209ENST00000578663 IL13P35225 146 aa9.78□□□□□ -0.84
CDK5RAP3-209ENST00000578663 IARSP41252 1262 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-209ENST00000578663 TTC5Q8N0Z6 440 aa9.78□□□□□ -0.84
CDK5RAP3-209ENST00000578663 SNX27Q96L92 541 aa9.78□□□□□ -0.84
CDK5RAP3-209ENST00000578663 LGR6Q9HBX8 967 aa9.78□□□□□ -0.84
CDK5RAP3-209ENST00000578663 STXBP5LQ9Y2K9 1186 aa9.78□□□□□ -0.84
CDK5RAP3-209ENST00000578663 PRUNE2Q8WUY3 3088 aa9.77□□□□□ -0.84
CDK5RAP3-209ENST00000578663 LMOD1P29536 600 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-209ENST00000578663 INTS3Q68E01 1043 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-209ENST00000578663 DLK2Q6UY11 383 aa9.77□□□□□ -0.85
CDK5RAP3-209ENST00000578663 FAM122AQ96E09 287 aa9.77□□□□□ -0.85
CDK5RAP3-209ENST00000578663 PSMD1Q99460 953 aa9.77□□□□□ -0.85
CDK5RAP3-209ENST00000578663 PGAP2Q9UHJ9 254 aa9.77□□□□□ -0.85
CDK5RAP3-209ENST00000578663 GJA3Q9Y6H8 435 aa9.77□□□□□ -0.85
CDK5RAP3-209ENST00000578663 SIPA1L3O60292 1781 aaPredicted RBP9.76□□□□□ -0.85
CDK5RAP3-209ENST00000578663 TBC1D8O95759 1140 aa9.76□□□□□ -0.85
CDK5RAP3-209ENST00000578663 OLFM4Q6UX06 510 aa9.76□□□□□ -0.85
CDK5RAP3-209ENST00000578663 CLEC4GQ6UXB4 293 aa9.76□□□□□ -0.85
CDK5RAP3-209ENST00000578663 NPM2Q86SE8 214 aaKnown RBP9.76□□□□□ -0.85
CDK5RAP3-209ENST00000578663 JDP2Q8WYK2 163 aa9.76□□□□□ -0.85
CDK5RAP3-209ENST00000578663 TBC1D2BQ9UPU7 963 aa9.76□□□□□ -0.85
CDK5RAP3-209ENST00000578663 SLC10A3P09131 477 aa9.75□□□□□ -0.85
CDK5RAP3-209ENST00000578663 EIF6P56537 245 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-209ENST00000578663 GRIPAP1Q4V328 841 aa9.75□□□□□ -0.85
CDK5RAP3-209ENST00000578663 CC2D2BQ6DHV5 1058 aa9.75□□□□□ -0.85
CDK5RAP3-209ENST00000578663 ZNF790Q6PG37 636 aa9.75□□□□□ -0.85
CDK5RAP3-209ENST00000578663 CCDC102AQ96A19 550 aa9.75□□□□□ -0.85
CDK5RAP3-209ENST00000578663 ZNF496Q96IT1 587 aaPredicted RBP9.75□□□□□ -0.85
CDK5RAP3-209ENST00000578663 ZNF652Q9Y2D9 606 aa9.75□□□□□ -0.85
CDK5RAP3-209ENST00000578663 ALDH1B1P30837 517 aa9.74□□□□□ -0.85
CDK5RAP3-209ENST00000578663 MORC1Q86VD1 984 aa9.74□□□□□ -0.85
CDK5RAP3-209ENST00000578663 NBPF5PQ86XG9 351 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-209ENST00000578663 DZIP3Q86Y13 1208 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-209ENST00000578663 PIEZO1Q92508 2521 aa9.74□□□□□ -0.85
CDK5RAP3-209ENST00000578663 RIC1Q4ADV7 1423 aa9.73□□□□□ -0.85
CDK5RAP3-209ENST00000578663 GPR25O00155 361 aa9.73□□□□□ -0.85
CDK5RAP3-209ENST00000578663 ZNF157P51786 506 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-209ENST00000578663 NOM1Q5C9Z4 860 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-209ENST00000578663 Q7L0L9 218 aa9.73□□□□□ -0.85
CDK5RAP3-209ENST00000578663 FMNL2Q96PY5 1086 aa9.73□□□□□ -0.85
CDK5RAP3-209ENST00000578663 ADARB2Q9NS39 739 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-209ENST00000578663 ZNF330Q9Y3S2 320 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-209ENST00000578663 KDM3BQ7LBC6 1761 aa9.73□□□□□ -0.85
CDK5RAP3-209ENST00000578663 HIRAP54198 1017 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-209ENST00000578663 TEFQ10587 303 aa9.72□□□□□ -0.85
CDK5RAP3-209ENST00000578663 MTHFSDQ2M296 383 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-209ENST00000578663 CRY2Q49AN0 593 aa9.72□□□□□ -0.85
CDK5RAP3-209ENST00000578663 TPTE2Q6XPS3 522 aa9.72□□□□□ -0.85
CDK5RAP3-209ENST00000578663 DEFB123Q8N688 67 aa9.72□□□□□ -0.85
CDK5RAP3-209ENST00000578663 CDHR2Q9BYE9 1310 aa9.72□□□□□ -0.85
CDK5RAP3-209ENST00000578663 A1BGP04217 495 aa9.71□□□□□ -0.86
CDK5RAP3-209ENST00000578663 CDC37L1Q7L3B6 337 aa9.71□□□□□ -0.86
CDK5RAP3-209ENST00000578663 MTMR10Q9NXD2 777 aa9.71□□□□□ -0.86
CDK5RAP3-209ENST00000578663 GPRC5DQ9NZD1 345 aa9.71□□□□□ -0.86
CDK5RAP3-209ENST00000578663 CEMIPQ8WUJ3 1361 aa9.71□□□□□ -0.86
CDK5RAP3-209ENST00000578663 ZC3H15Q8WU90 426 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-209ENST00000578663 ARMC5Q96C12 935 aa9.7□□□□□ -0.86
CDK5RAP3-209ENST00000578663 R3HDMLQ9H3Y0 253 aa9.7□□□□□ -0.86
CDK5RAP3-209ENST00000578663 PANK3Q9H999 370 aa9.7□□□□□ -0.86
CDK5RAP3-209ENST00000578663 GBA2Q9HCG7 927 aaPredicted RBP9.7□□□□□ -0.86
CDK5RAP3-209ENST00000578663 KIF7Q2M1P5 1343 aa9.7□□□□□ -0.86
CDK5RAP3-209ENST00000578663 IBTKQ9P2D0 1353 aaPredicted RBP9.7□□□□□ -0.86
CDK5RAP3-209ENST00000578663 A0A1W2PPC1 479 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms