RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 GTF2E1P29083 439 aaPredicted RBP17.62■□□□□ 0.41
CSNK1D-208ENST00000578501 CCDC30Q5VVM6 783 aa17.62■□□□□ 0.41
CSNK1D-208ENST00000578501 DPY19L2Q6NUT2 758 aa17.62■□□□□ 0.41
CSNK1D-208ENST00000578501 PPP1R42Q7Z4L9 355 aa17.62■□□□□ 0.41
CSNK1D-208ENST00000578501 TSPYL6Q8N831 410 aa17.62■□□□□ 0.41
CSNK1D-208ENST00000578501 PLBD2Q8NHP8 589 aa17.62■□□□□ 0.41
CSNK1D-208ENST00000578501 MASTLQ96GX5 879 aa17.62■□□□□ 0.41
CSNK1D-208ENST00000578501 SBF1O95248 1867 aa17.61■□□□□ 0.41
CSNK1D-208ENST00000578501 GPTP24298 496 aa17.61■□□□□ 0.41
CSNK1D-208ENST00000578501 TCIRG1Q13488 830 aa17.61■□□□□ 0.41
CSNK1D-208ENST00000578501 SUSD4Q5VX71 490 aa17.61■□□□□ 0.41
CSNK1D-208ENST00000578501 ANKRD13DQ6ZTN6 518 aa17.61■□□□□ 0.41
CSNK1D-208ENST00000578501 CNKSR1Q969H4 720 aa17.61■□□□□ 0.41
CSNK1D-208ENST00000578501 ZNF622Q969S3 477 aaKnown RBP eCLIP17.61■□□□□ 0.41
CSNK1D-208ENST00000578501 SALL2Q9Y467 1007 aaPredicted RBP17.61■□□□□ 0.41
CSNK1D-208ENST00000578501 FAM177BA6PVY3 158 aa17.6■□□□□ 0.41
CSNK1D-208ENST00000578501 NTSR2O95665 410 aa17.6■□□□□ 0.41
CSNK1D-208ENST00000578501 RASSF7Q02833 373 aa17.6■□□□□ 0.41
CSNK1D-208ENST00000578501 RIC1Q4ADV7 1423 aa17.6■□□□□ 0.41
CSNK1D-208ENST00000578501 RNF123Q5XPI4 1314 aa17.59■□□□□ 0.41
CSNK1D-208ENST00000578501 FANCIQ9NVI1 1328 aa17.59■□□□□ 0.41
CSNK1D-208ENST00000578501 NPR1P16066 1061 aa17.59■□□□□ 0.41
CSNK1D-208ENST00000578501 TWISTNBQ3B726 338 aaPredicted RBP17.59■□□□□ 0.41
CSNK1D-208ENST00000578501 UTP14AQ9BVJ6 771 aaKnown RBP17.59■□□□□ 0.41
CSNK1D-208ENST00000578501 COL11A2P13942 1736 aaPredicted RBP17.58■□□□□ 0.41
CSNK1D-208ENST00000578501 ZNF521Q96K83 1311 aa17.58■□□□□ 0.4
CSNK1D-208ENST00000578501 GOLGA2Q08379 1002 aa17.58■□□□□ 0.4
CSNK1D-208ENST00000578501 CRY2Q49AN0 593 aa17.58■□□□□ 0.4
CSNK1D-208ENST00000578501 ERFEQ4G0M1 354 aa17.58■□□□□ 0.4
CSNK1D-208ENST00000578501 NLRP10Q86W26 655 aa17.58■□□□□ 0.4
CSNK1D-208ENST00000578501 NUTM1Q86Y26 1132 aa17.58■□□□□ 0.4
CSNK1D-208ENST00000578501 CREBZFQ9NS37 354 aa17.58■□□□□ 0.4
CSNK1D-208ENST00000578501 ABCC12Q96J65 1359 aa17.57■□□□□ 0.4
CSNK1D-208ENST00000578501 SLC10A5Q5PT55 438 aa17.57■□□□□ 0.4
CSNK1D-208ENST00000578501 MYH16Q9H6N6 1097 aa17.57■□□□□ 0.4
CSNK1D-208ENST00000578501 TRIM28Q13263 835 aaKnown RBP17.56■□□□□ 0.4
CSNK1D-208ENST00000578501 PRPF40BQ6NWY9 871 aaKnown RBP17.56■□□□□ 0.4
CSNK1D-208ENST00000578501 ISCA1Q9BUE6 129 aa17.56■□□□□ 0.4
CSNK1D-208ENST00000578501 PHAXQ9H814 394 aaKnown RBP17.56■□□□□ 0.4
CSNK1D-208ENST00000578501 ALDH1B1P30837 517 aa17.55■□□□□ 0.4
CSNK1D-208ENST00000578501 SOGA3Q5TF21 947 aa17.55■□□□□ 0.4
CSNK1D-208ENST00000578501 STK31Q9BXU1 1019 aa17.55■□□□□ 0.4
CSNK1D-208ENST00000578501 SPINK5Q9NQ38 1064 aaPredicted RBP17.55■□□□□ 0.4
CSNK1D-208ENST00000578501 PRDM10Q9NQV6 1147 aa17.55■□□□□ 0.4
CSNK1D-208ENST00000578501 ANKRD36CQ5JPF3 1778 aa17.55■□□□□ 0.4
CSNK1D-208ENST00000578501 VAMP4O75379 141 aa17.54■□□□□ 0.4
CSNK1D-208ENST00000578501 DDX58O95786 925 aaKnown RBP17.54■□□□□ 0.4
CSNK1D-208ENST00000578501 HOXA10P31260 410 aaPredicted RBP17.54■□□□□ 0.4
CSNK1D-208ENST00000578501 DIEXFQ68CQ4 756 aaKnown RBP17.54■□□□□ 0.4
CSNK1D-208ENST00000578501 RIC3Q7Z5B4 369 aa17.54■□□□□ 0.4
CSNK1D-208ENST00000578501 SH3TC1Q8TE82 1336 aa17.53■□□□□ 0.4
CSNK1D-208ENST00000578501 C21orf2O43822 256 aa17.53■□□□□ 0.4
CSNK1D-208ENST00000578501 EXOSC9Q06265 439 aaKnown RBP17.53■□□□□ 0.4
CSNK1D-208ENST00000578501 CHADLQ6NUI6 762 aa17.53■□□□□ 0.4
CSNK1D-208ENST00000578501 C7orf43Q8WVR3 580 aa17.53■□□□□ 0.4
CSNK1D-208ENST00000578501 NLRP3Q96P20 1036 aa17.53■□□□□ 0.4
CSNK1D-208ENST00000578501 TRMT112Q9UI30 125 aaKnown RBP17.53■□□□□ 0.4
CSNK1D-208ENST00000578501 PCNTO95613 3336 aa17.53■□□□□ 0.4
CSNK1D-208ENST00000578501 ARFGEF2Q9Y6D5 1785 aa17.53■□□□□ 0.4
CSNK1D-208ENST00000578501 POTECB2RU33 542 aa17.52■□□□□ 0.4
CSNK1D-208ENST00000578501 AIDAQ96BJ3 306 aa17.52■□□□□ 0.4
CSNK1D-208ENST00000578501 MKRN1Q9UHC7 482 aaKnown RBP17.52■□□□□ 0.4
CSNK1D-208ENST00000578501 LTBP3Q9NS15 1303 aa17.51■□□□□ 0.39
CSNK1D-208ENST00000578501 NFKBIEO00221 500 aa17.51■□□□□ 0.39
CSNK1D-208ENST00000578501 SLC34A2O95436 690 aa17.51■□□□□ 0.39
CSNK1D-208ENST00000578501 SLC4A2P04920 1241 aa17.51■□□□□ 0.39
CSNK1D-208ENST00000578501 RPGRQ92834 1020 aaKnown RBP17.51■□□□□ 0.39
CSNK1D-208ENST00000578501 CRAMP1Q96RY5 1269 aa17.51■□□□□ 0.39
CSNK1D-208ENST00000578501 SLX4Q8IY92 1834 aa17.51■□□□□ 0.39
CSNK1D-208ENST00000578501 ATP5J2-PTCD1G3V325 749 aa17.5■□□□□ 0.39
CSNK1D-208ENST00000578501 CTCFP49711 727 aaPredicted RBP17.5■□□□□ 0.39
CSNK1D-208ENST00000578501 KSR2Q6VAB6 950 aa17.5■□□□□ 0.39
CSNK1D-208ENST00000578501 RBM17Q96I25 401 aaKnown RBP17.5■□□□□ 0.39
CSNK1D-208ENST00000578501 METTL22Q9BUU2 404 aaPredicted RBP17.5■□□□□ 0.39
CSNK1D-208ENST00000578501 E9PSI1 815 aa17.49■□□□□ 0.39
CSNK1D-208ENST00000578501 FOXN1O15353 648 aa17.49■□□□□ 0.39
CSNK1D-208ENST00000578501 CCDC93Q567U6 631 aa17.49■□□□□ 0.39
CSNK1D-208ENST00000578501 C3orf67Q6ZVT6 689 aa17.49■□□□□ 0.39
CSNK1D-208ENST00000578501 CCDC191Q8NCU4 936 aa17.49■□□□□ 0.39
CSNK1D-208ENST00000578501 PI4KAP2A4QPH2 592 aa17.48■□□□□ 0.39
CSNK1D-208ENST00000578501 TCERG1O14776 1098 aaKnown RBP17.48■□□□□ 0.39
CSNK1D-208ENST00000578501 CC2D2BQ6DHV5 1058 aa17.48■□□□□ 0.39
CSNK1D-208ENST00000578501 RTKN2Q8IZC4 609 aa17.48■□□□□ 0.39
CSNK1D-208ENST00000578501 MIER1Q8N108 512 aa17.48■□□□□ 0.39
CSNK1D-208ENST00000578501 SYNE4Q8N205 404 aa17.48■□□□□ 0.39
CSNK1D-208ENST00000578501 PI4KAP1Q8N8J0 262 aa17.48■□□□□ 0.39
CSNK1D-208ENST00000578501 MYD88Q99836 296 aa17.48■□□□□ 0.39
CSNK1D-208ENST00000578501 TAOK3Q9H2K8 898 aa17.48■□□□□ 0.39
CSNK1D-208ENST00000578501 ZNF219Q9P2Y4 722 aaPredicted RBP17.48■□□□□ 0.39
CSNK1D-208ENST00000578501 MAP3K2Q9Y2U5 619 aa17.48■□□□□ 0.39
CSNK1D-208ENST00000578501 CNTNAP1P78357 1384 aa17.48■□□□□ 0.39
CSNK1D-208ENST00000578501 FER1L6Q2WGJ9 1857 aa17.48■□□□□ 0.39
CSNK1D-208ENST00000578501 TIAM2Q8IVF5 1701 aa17.47■□□□□ 0.39
CSNK1D-208ENST00000578501 HCLS1P14317 486 aaPredicted RBP17.47■□□□□ 0.39
CSNK1D-208ENST00000578501 FLIIQ13045 1269 aa17.47■□□□□ 0.39
CSNK1D-208ENST00000578501 GRIPAP1Q4V328 841 aa17.47■□□□□ 0.39
CSNK1D-208ENST00000578501 G2E3Q7L622 706 aa17.47■□□□□ 0.39
CSNK1D-208ENST00000578501 ZBTB38Q8NAP3 1195 aaPredicted RBP17.47■□□□□ 0.39
CSNK1D-208ENST00000578501 FAM89AQ96GI7 184 aa17.47■□□□□ 0.39
CSNK1D-208ENST00000578501 IQCA1LA6NCM1 817 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms