RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 UBE3BQ7Z3V4 1068 aa16.39■□□□□ 0.21
CTC1-203ENST00000578240 PPP1R42Q7Z4L9 355 aa16.39■□□□□ 0.21
CTC1-203ENST00000578240 BICC1Q9H694 974 aaKnown RBP16.39■□□□□ 0.21
CTC1-203ENST00000578240 TAF1P21675 1872 aa16.39■□□□□ 0.21
CTC1-203ENST00000578240 LRP5O75197 1615 aa16.38■□□□□ 0.21
CTC1-203ENST00000578240 PSDA5PKW4 1024 aaPredicted RBP16.38■□□□□ 0.21
CTC1-203ENST00000578240 ERVV-1B6SEH8 477 aa16.38■□□□□ 0.21
CTC1-203ENST00000578240 H7C1W4 665 aa16.38■□□□□ 0.21
CTC1-203ENST00000578240 TRIM28Q13263 835 aaKnown RBP16.38■□□□□ 0.21
CTC1-203ENST00000578240 RC3H1Q5TC82 1133 aaKnown RBP16.38■□□□□ 0.21
CTC1-203ENST00000578240 CCDC191Q8NCU4 936 aa16.38■□□□□ 0.21
CTC1-203ENST00000578240 CWC25Q9NXE8 425 aaPredicted RBP16.38■□□□□ 0.21
CTC1-203ENST00000578240 A0A087WZG4 1122 aa16.37■□□□□ 0.21
CTC1-203ENST00000578240 RGS3P49796 1198 aa16.37■□□□□ 0.21
CTC1-203ENST00000578240 PROM2Q8N271 834 aa16.37■□□□□ 0.21
CTC1-203ENST00000578240 COL4A1P02462 1669 aa16.36■□□□□ 0.21
CTC1-203ENST00000578240 TNRC6CQ9HCJ0 1690 aaKnown RBP16.36■□□□□ 0.21
CTC1-203ENST00000578240 HMMRO75330 724 aa16.36■□□□□ 0.21
CTC1-203ENST00000578240 RABL6Q3YEC7 729 aaPredicted RBP16.36■□□□□ 0.21
CTC1-203ENST00000578240 NLRP10Q86W26 655 aa16.36■□□□□ 0.21
CTC1-203ENST00000578240 CHD1LQ86WJ1 897 aa16.36■□□□□ 0.21
CTC1-203ENST00000578240 ZNF34Q8IZ26 560 aa16.36■□□□□ 0.21
CTC1-203ENST00000578240 LNPKQ9C0E8 428 aa16.36■□□□□ 0.21
CTC1-203ENST00000578240 EXOC6BQ9Y2D4 811 aa16.36■□□□□ 0.21
CTC1-203ENST00000578240 SRGAP3O43295 1099 aa16.35■□□□□ 0.21
CTC1-203ENST00000578240 RPS6KA4O75676 772 aa16.35■□□□□ 0.21
CTC1-203ENST00000578240 GPTP24298 496 aa16.35■□□□□ 0.21
CTC1-203ENST00000578240 R3HDM1Q15032 1099 aaKnown RBP16.35■□□□□ 0.21
CTC1-203ENST00000578240 PLSCR1O15162 318 aa16.34■□□□□ 0.21
CTC1-203ENST00000578240 GNPATO15228 680 aa16.34■□□□□ 0.21
CTC1-203ENST00000578240 PELP1Q8IZL8 1130 aaKnown RBP16.34■□□□□ 0.21
CTC1-203ENST00000578240 ARXQ96QS3 562 aa16.34■□□□□ 0.21
CTC1-203ENST00000578240 BCL2L12Q9HB09 334 aa16.34■□□□□ 0.21
CTC1-203ENST00000578240 FOXO4P98177 505 aa16.34■□□□□ 0.21
CTC1-203ENST00000578240 PCCAP05165 728 aaPredicted RBP16.33■□□□□ 0.2
CTC1-203ENST00000578240 TXNRD1Q16881 649 aa16.33■□□□□ 0.2
CTC1-203ENST00000578240 HSP90AB3PQ58FF7 597 aa16.33■□□□□ 0.2
CTC1-203ENST00000578240 RTL5Q5HYW3 569 aaPredicted RBP16.33■□□□□ 0.2
CTC1-203ENST00000578240 SLC27A3Q5K4L6 730 aa16.33■□□□□ 0.2
CTC1-203ENST00000578240 ANKRD45Q5TZF3 282 aa16.33■□□□□ 0.2
CTC1-203ENST00000578240 SYNE4Q8N205 404 aa16.33■□□□□ 0.2
CTC1-203ENST00000578240 SMARCA5O60264 1052 aaPredicted RBP16.32■□□□□ 0.2
CTC1-203ENST00000578240 RFX5P48382 616 aaPredicted RBP16.32■□□□□ 0.2
CTC1-203ENST00000578240 CDHR2Q9BYE9 1310 aa16.32■□□□□ 0.2
CTC1-203ENST00000578240 NRXN2Q9P2S2 1712 aa16.32■□□□□ 0.2
CTC1-203ENST00000578240 ZBTB38Q8NAP3 1195 aaPredicted RBP16.31■□□□□ 0.2
CTC1-203ENST00000578240 TSHZ2Q9NRE2 1034 aa16.31■□□□□ 0.2
CTC1-203ENST00000578240 SRP68Q9UHB9 627 aaKnown RBP16.31■□□□□ 0.2
CTC1-203ENST00000578240 PA2G4Q9UQ80 394 aaKnown RBP16.31■□□□□ 0.2
CTC1-203ENST00000578240 SALL3Q9BXA9 1300 aa16.31■□□□□ 0.2
CTC1-203ENST00000578240 ARAP2Q8WZ64 1704 aa16.31■□□□□ 0.2
CTC1-203ENST00000578240 ANKRD31Q8N7Z5 1873 aa16.31■□□□□ 0.2
CTC1-203ENST00000578240 OTUD7AQ8TE49 926 aaPredicted RBP16.3■□□□□ 0.2
CTC1-203ENST00000578240 FAM89AQ96GI7 184 aa16.3■□□□□ 0.2
CTC1-203ENST00000578240 NARFQ9UHQ1 456 aa16.3■□□□□ 0.2
CTC1-203ENST00000578240 NOP58Q9Y2X3 529 aaKnown RBP16.3■□□□□ 0.2
CTC1-203ENST00000578240 USP42Q9H9J4 1324 aaKnown RBP16.3■□□□□ 0.2
CTC1-203ENST00000578240 APBB1O00213 710 aa16.3■□□□□ 0.2
CTC1-203ENST00000578240 RGL2O15211 777 aa16.3■□□□□ 0.2
CTC1-203ENST00000578240 PLA2G12BQ9BX93 195 aa16.3■□□□□ 0.2
CTC1-203ENST00000578240 HDAC5Q9UQL6 1122 aa16.3■□□□□ 0.2
CTC1-203ENST00000578240 SRCAPQ6ZRS2 3230 aa16.29■□□□□ 0.2
CTC1-203ENST00000578240 NTSR2O95665 410 aa16.29■□□□□ 0.2
CTC1-203ENST00000578240 SUSD4Q5VX71 490 aa16.29■□□□□ 0.2
CTC1-203ENST00000578240 NPM2Q86SE8 214 aaKnown RBP16.29■□□□□ 0.2
CTC1-203ENST00000578240 KLHDC4Q8TBB5 520 aa16.29■□□□□ 0.2
CTC1-203ENST00000578240 ARHGEF1Q92888 912 aaKnown RBP16.29■□□□□ 0.2
CTC1-203ENST00000578240 RTCBQ9Y3I0 505 aaKnown RBP16.29■□□□□ 0.2
CTC1-203ENST00000578240 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.29■□□□□ 0.2
CTC1-203ENST00000578240 ZNF827Q17R98 1081 aa16.28■□□□□ 0.2
CTC1-203ENST00000578240 USPL1Q5W0Q7 1092 aa16.28■□□□□ 0.2
CTC1-203ENST00000578240 LMBR1LQ6UX01 489 aa16.28■□□□□ 0.2
CTC1-203ENST00000578240 CLEC4GQ6UXB4 293 aa16.28■□□□□ 0.2
CTC1-203ENST00000578240 C16orf71Q8IYS4 520 aaPredicted RBP16.28■□□□□ 0.2
CTC1-203ENST00000578240 AK7Q96M32 723 aa16.28■□□□□ 0.2
CTC1-203ENST00000578240 SURF6O75683 361 aaKnown RBP16.27■□□□□ 0.2
CTC1-203ENST00000578240 PTPN12Q05209 780 aaKnown RBP16.27■□□□□ 0.2
CTC1-203ENST00000578240 C8orf34Q49A92 452 aa16.27■□□□□ 0.2
CTC1-203ENST00000578240 PHF14O94880 888 aa16.27■□□□□ 0.19
CTC1-203ENST00000578240 TBC1D9BQ66K14 1250 aa16.27■□□□□ 0.19
CTC1-203ENST00000578240 PLEKHM2Q8IWE5 1019 aa16.27■□□□□ 0.19
CTC1-203ENST00000578240 NIP7Q9Y221 180 aaKnown RBP eCLIP16.27■□□□□ 0.19
CTC1-203ENST00000578240 ABCC12Q96J65 1359 aa16.26■□□□□ 0.19
CTC1-203ENST00000578240 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.26■□□□□ 0.19
CTC1-203ENST00000578240 RHPN1Q8TCX5 695 aa16.26■□□□□ 0.19
CTC1-203ENST00000578240 LRRCC1Q9C099 1032 aa16.26■□□□□ 0.19
CTC1-203ENST00000578240 COPRSQ9NQ92 184 aa16.26■□□□□ 0.19
CTC1-203ENST00000578240 TRMT112Q9UI30 125 aaKnown RBP16.26■□□□□ 0.19
CTC1-203ENST00000578240 ZNF652Q9Y2D9 606 aa16.26■□□□□ 0.19
CTC1-203ENST00000578240 FAM161AQ3B820 660 aa16.25■□□□□ 0.19
CTC1-203ENST00000578240 PARP10Q53GL7 1025 aa16.25■□□□□ 0.19
CTC1-203ENST00000578240 AKT1S1Q96B36 256 aa16.25■□□□□ 0.19
CTC1-203ENST00000578240 IRS4O14654 1257 aaPredicted RBP16.24■□□□□ 0.19
CTC1-203ENST00000578240 SASH1O94885 1247 aa16.24■□□□□ 0.19
CTC1-203ENST00000578240 CSF1RP07333 972 aa16.24■□□□□ 0.19
CTC1-203ENST00000578240 ADRA2BP18089 450 aa16.24■□□□□ 0.19
CTC1-203ENST00000578240 IL1RAPL2Q9NP60 686 aa16.24■□□□□ 0.19
CTC1-203ENST00000578240 RIC1Q4ADV7 1423 aa16.24■□□□□ 0.19
CTC1-203ENST00000578240 COL11A2P13942 1736 aaPredicted RBP16.24■□□□□ 0.19
CTC1-203ENST00000578240 SH3TC1Q8TE82 1336 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms