RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 PRPF38BQ5VTL8 546 aaKnown RBP18.22■□□□□ 0.51
SREBF1-217ENST00000577897 SYNE4Q8N205 404 aa18.22■□□□□ 0.51
SREBF1-217ENST00000577897 JDP2Q8WYK2 163 aa18.22■□□□□ 0.51
SREBF1-217ENST00000577897 CA12O43570 354 aa18.21■□□□□ 0.51
SREBF1-217ENST00000577897 A1BGP04217 495 aa18.21■□□□□ 0.51
SREBF1-217ENST00000577897 DZIP3Q86Y13 1208 aaKnown RBP18.21■□□□□ 0.51
SREBF1-217ENST00000577897 SUPT16HQ9Y5B9 1047 aaKnown RBP18.21■□□□□ 0.51
SREBF1-217ENST00000577897 TLL2Q9Y6L7 1015 aa18.21■□□□□ 0.51
SREBF1-217ENST00000577897 EIF6P56537 245 aaKnown RBP18.2■□□□□ 0.5
SREBF1-217ENST00000577897 CST9Q5W186 159 aa18.2■□□□□ 0.5
SREBF1-217ENST00000577897 TEX13AQ9BXU3 409 aaPredicted RBP18.2■□□□□ 0.5
SREBF1-217ENST00000577897 TRPM7Q96QT4 1865 aa18.2■□□□□ 0.5
SREBF1-217ENST00000577897 FAM177BA6PVY3 158 aa18.19■□□□□ 0.5
SREBF1-217ENST00000577897 MAP2K2P36507 400 aa18.19■□□□□ 0.5
SREBF1-217ENST00000577897 EPS15P42566 896 aa18.19■□□□□ 0.5
SREBF1-217ENST00000577897 PIP4K2AP48426 406 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-217ENST00000577897 TEFQ10587 303 aa18.18■□□□□ 0.5
SREBF1-217ENST00000577897 ZNF790Q6PG37 636 aa18.18■□□□□ 0.5
SREBF1-217ENST00000577897 SCNN1DP51172 638 aa18.16■□□□□ 0.5
SREBF1-217ENST00000577897 SOX10P56693 466 aa18.16■□□□□ 0.5
SREBF1-217ENST00000577897 NCBP3Q53F19 620 aaKnown RBP18.16■□□□□ 0.5
SREBF1-217ENST00000577897 COL4A5P29400 1685 aa18.15■□□□□ 0.5
SREBF1-217ENST00000577897 CELF2O95319 508 aaKnown RBP18.15■□□□□ 0.5
SREBF1-217ENST00000577897 USP50Q70EL3 339 aaPredicted RBP18.15■□□□□ 0.5
SREBF1-217ENST00000577897 RUNDC1Q96C34 613 aa18.15■□□□□ 0.5
SREBF1-217ENST00000577897 FMNL2Q96PY5 1086 aa18.15■□□□□ 0.5
SREBF1-217ENST00000577897 ZNF652Q9Y2D9 606 aa18.15■□□□□ 0.5
SREBF1-217ENST00000577897 NEFMP07197 916 aa18.14■□□□□ 0.49
SREBF1-217ENST00000577897 ALDH1B1P30837 517 aa18.14■□□□□ 0.49
SREBF1-217ENST00000577897 BRPF1P55201 1214 aaPredicted RBP18.14■□□□□ 0.49
SREBF1-217ENST00000577897 CIAPIN1Q6FI81 312 aa18.14■□□□□ 0.49
SREBF1-217ENST00000577897 TPTE2Q6XPS3 522 aa18.14■□□□□ 0.49
SREBF1-217ENST00000577897 SAPCD2Q86UD0 394 aa18.14■□□□□ 0.49
SREBF1-217ENST00000577897 PSMD1Q99460 953 aa18.14■□□□□ 0.49
SREBF1-217ENST00000577897 ZNF408Q9H9D4 720 aa18.14■□□□□ 0.49
SREBF1-217ENST00000577897 KLRG2A4D1S0 409 aaPredicted RBP18.13■□□□□ 0.49
SREBF1-217ENST00000577897 LARGE2Q8N3Y3 721 aa18.13■□□□□ 0.49
SREBF1-217ENST00000577897 NIP7Q9Y221 180 aaKnown RBP eCLIP18.13■□□□□ 0.49
SREBF1-217ENST00000577897 GTF2E1P29083 439 aaPredicted RBP18.12■□□□□ 0.49
SREBF1-217ENST00000577897 GOLGA2Q08379 1002 aa18.12■□□□□ 0.49
SREBF1-217ENST00000577897 CLEC4GQ6UXB4 293 aa18.12■□□□□ 0.49
SREBF1-217ENST00000577897 SALL2Q9Y467 1007 aaPredicted RBP18.12■□□□□ 0.49
SREBF1-217ENST00000577897 SNED1Q8TER0 1413 aa18.11■□□□□ 0.49
SREBF1-217ENST00000577897 SIPA1L3O60292 1781 aaPredicted RBP18.11■□□□□ 0.49
SREBF1-217ENST00000577897 KCNQ3O43525 872 aa18.1■□□□□ 0.49
SREBF1-217ENST00000577897 DIAPH1O60610 1272 aaKnown RBP18.1■□□□□ 0.49
SREBF1-217ENST00000577897 IL17REQ8NFR9 667 aa18.1■□□□□ 0.49
SREBF1-217ENST00000577897 GLIS2Q9BZE0 524 aaPredicted RBP18.1■□□□□ 0.49
SREBF1-217ENST00000577897 USP16Q9Y5T5 823 aa18.1■□□□□ 0.49
SREBF1-217ENST00000577897 U2AF1L5P0DN76 240 aaPredicted RBP18.09■□□□□ 0.49
SREBF1-217ENST00000577897 U2AF1Q01081 240 aaKnown RBP eCLIP18.09■□□□□ 0.49
SREBF1-217ENST00000577897 NIM1KQ8IY84 436 aa18.09■□□□□ 0.49
SREBF1-217ENST00000577897 ADARB2Q9NS39 739 aaKnown RBP18.09■□□□□ 0.49
SREBF1-217ENST00000577897 PRAMEF22A3QJZ6 481 aa18.08■□□□□ 0.48
SREBF1-217ENST00000577897 GNAT3A8MTJ3 354 aa18.08■□□□□ 0.48
SREBF1-217ENST00000577897 TCERG1O14776 1098 aaKnown RBP18.08■□□□□ 0.48
SREBF1-217ENST00000577897 ZIC5Q96T25 663 aa18.08■□□□□ 0.48
SREBF1-217ENST00000577897 MAPK8IP3Q9UPT6 1336 aa18.07■□□□□ 0.48
SREBF1-217ENST00000577897 BTBD11A6QL63 1104 aa18.07■□□□□ 0.48
SREBF1-217ENST00000577897 E9PSI1 815 aa18.07■□□□□ 0.48
SREBF1-217ENST00000577897 APAF1O14727 1248 aa18.07■□□□□ 0.48
SREBF1-217ENST00000577897 CC2D2BQ6DHV5 1058 aa18.07■□□□□ 0.48
SREBF1-217ENST00000577897 SLC51AQ86UW1 340 aa18.07■□□□□ 0.48
SREBF1-217ENST00000577897 CCDC146Q8IYE0 955 aa18.07■□□□□ 0.48
SREBF1-217ENST00000577897 HHIPL1Q96JK4 782 aa18.07■□□□□ 0.48
SREBF1-217ENST00000577897 GPRC5DQ9NZD1 345 aa18.07■□□□□ 0.48
SREBF1-217ENST00000577897 RCAN3Q9UKA8 241 aa18.07■□□□□ 0.48
SREBF1-217ENST00000577897 ABCC12Q96J65 1359 aa18.06■□□□□ 0.48
SREBF1-217ENST00000577897 RPGRQ92834 1020 aaKnown RBP18.06■□□□□ 0.48
SREBF1-217ENST00000577897 U2SURPO15042 1029 aaKnown RBP18.05■□□□□ 0.48
SREBF1-217ENST00000577897 PPIP5K2O43314 1243 aa18.05■□□□□ 0.48
SREBF1-217ENST00000577897 NOGQ13253 232 aa18.05■□□□□ 0.48
SREBF1-217ENST00000577897 NUTM1Q86Y26 1132 aa18.05■□□□□ 0.48
SREBF1-217ENST00000577897 GAS2L2Q8NHY3 880 aa18.05■□□□□ 0.48
SREBF1-217ENST00000577897 GCC1Q96CN9 775 aa18.05■□□□□ 0.48
SREBF1-217ENST00000577897 HLFQ16534 295 aa18.04■□□□□ 0.48
SREBF1-217ENST00000577897 AOC3Q16853 763 aa18.04■□□□□ 0.48
SREBF1-217ENST00000577897 CCDC27Q2M243 656 aa18.04■□□□□ 0.48
SREBF1-217ENST00000577897 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.04■□□□□ 0.48
SREBF1-217ENST00000577897 PPP4R2Q9NY27 417 aa18.04■□□□□ 0.48
SREBF1-217ENST00000577897 PPEF1O14829 653 aaPredicted RBP18.03■□□□□ 0.48
SREBF1-217ENST00000577897 HUNKP57058 714 aa18.03■□□□□ 0.48
SREBF1-217ENST00000577897 CRY2Q49AN0 593 aa18.03■□□□□ 0.48
SREBF1-217ENST00000577897 ZNF521Q96K83 1311 aa18.02■□□□□ 0.48
SREBF1-217ENST00000577897 GMPSP49915 693 aaPredicted RBP18.02■□□□□ 0.48
SREBF1-217ENST00000577897 WDR63Q8IWG1 891 aa18.02■□□□□ 0.48
SREBF1-217ENST00000577897 NYXQ9GZU5 481 aa18.01■□□□□ 0.47
SREBF1-217ENST00000577897 NBPF26B4DH59 902 aa18■□□□□ 0.47
SREBF1-217ENST00000577897 SNRPA1P09661 255 aaKnown RBP18■□□□□ 0.47
SREBF1-217ENST00000577897 CXCL9Q07325 125 aa18■□□□□ 0.47
SREBF1-217ENST00000577897 SLFN5Q08AF3 891 aa18■□□□□ 0.47
SREBF1-217ENST00000577897 GRIPAP1Q4V328 841 aa18■□□□□ 0.47
SREBF1-217ENST00000577897 NBPF10Q6P3W6 841 aaKnown RBP18■□□□□ 0.47
SREBF1-217ENST00000577897 CDC37L1Q7L3B6 337 aa18■□□□□ 0.47
SREBF1-217ENST00000577897 NBPF15Q8N660 670 aa18■□□□□ 0.47
SREBF1-217ENST00000577897 BCL2L13Q9BXK5 485 aa18■□□□□ 0.47
SREBF1-217ENST00000577897 CEMIPQ8WUJ3 1361 aa18■□□□□ 0.47
SREBF1-217ENST00000577897 COL3A1P02461 1466 aaPredicted RBP18■□□□□ 0.47
SREBF1-217ENST00000577897 TRPM4Q8TD43 1214 aa17.99■□□□□ 0.47
SREBF1-217ENST00000577897 RBM17Q96I25 401 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms