RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 PLA2R1Q13018 1463 aa12.68□□□□□ -0.38
RNF43-203ENST00000577716 RIMS2Q9UQ26 1411 aa12.68□□□□□ -0.38
RNF43-203ENST00000577716 RAB11FIP4Q86YS3 637 aa12.68□□□□□ -0.38
RNF43-203ENST00000577716 RBSNQ9H1K0 784 aa12.68□□□□□ -0.38
RNF43-203ENST00000577716 CEP131Q9UPN4 1083 aa12.68□□□□□ -0.38
RNF43-203ENST00000577716 H0YHG0 523 aa12.67□□□□□ -0.38
RNF43-203ENST00000577716 IKQ13123 557 aaPredicted RBP12.67□□□□□ -0.38
RNF43-203ENST00000577716 CNNM3Q8NE01 707 aa12.67□□□□□ -0.38
RNF43-203ENST00000577716 EYA1Q99502 592 aa12.67□□□□□ -0.38
RNF43-203ENST00000577716 MSH6P52701 1360 aa12.67□□□□□ -0.38
RNF43-203ENST00000577716 ATP10AO60312 1499 aa12.67□□□□□ -0.38
RNF43-203ENST00000577716 KSR2Q6VAB6 950 aa12.67□□□□□ -0.38
RNF43-203ENST00000577716 TNRQ92752 1358 aa12.67□□□□□ -0.38
RNF43-203ENST00000577716 CCDC196A0A1B0GTZ2 297 aa12.67□□□□□ -0.38
RNF43-203ENST00000577716 PATL2C9JE40 543 aaKnown RBP12.67□□□□□ -0.38
RNF43-203ENST00000577716 ISM2Q6H9L7 571 aa12.67□□□□□ -0.38
RNF43-203ENST00000577716 UHRF1BP1LA0JNW5 1464 aa12.67□□□□□ -0.38
RNF43-203ENST00000577716 SYT1P21579 422 aa12.67□□□□□ -0.38
RNF43-203ENST00000577716 IL13P35225 146 aa12.67□□□□□ -0.38
RNF43-203ENST00000577716 COPS6Q7L5N1 327 aa12.67□□□□□ -0.38
RNF43-203ENST00000577716 ABCC1P33527 1531 aa12.67□□□□□ -0.38
RNF43-203ENST00000577716 IFIT3O14879 490 aaKnown RBP12.66□□□□□ -0.38
RNF43-203ENST00000577716 IGHMBP2P38935 993 aaKnown RBP12.66□□□□□ -0.38
RNF43-203ENST00000577716 TRMT2AQ8IZ69 625 aaKnown RBP12.66□□□□□ -0.38
RNF43-203ENST00000577716 ANKRD24Q8TF21 1146 aa12.66□□□□□ -0.38
RNF43-203ENST00000577716 XAGE3Q8WTP9 111 aa12.66□□□□□ -0.38
RNF43-203ENST00000577716 CGNQ9P2M7 1197 aaKnown RBP12.66□□□□□ -0.38
RNF43-203ENST00000577716 YTHDC2Q9H6S0 1430 aaKnown RBP12.66□□□□□ -0.38
RNF43-203ENST00000577716 FLT4P35916 1363 aa12.66□□□□□ -0.38
RNF43-203ENST00000577716 KRT18P05783 430 aaKnown RBP12.66□□□□□ -0.38
RNF43-203ENST00000577716 IFNL2Q8IZJ0 200 aa12.66□□□□□ -0.38
RNF43-203ENST00000577716 TTC37Q6PGP7 1564 aa12.66□□□□□ -0.38
RNF43-203ENST00000577716 NPHP3Q7Z494 1330 aa12.66□□□□□ -0.38
RNF43-203ENST00000577716 SPDYE4A6NLX3 237 aa12.66□□□□□ -0.38
RNF43-203ENST00000577716 GOLGA8AA7E2F4 631 aa12.66□□□□□ -0.38
RNF43-203ENST00000577716 CPA1P15085 419 aa12.66□□□□□ -0.38
RNF43-203ENST00000577716 CT47A1Q5JQC4 288 aaPredicted RBP12.66□□□□□ -0.38
RNF43-203ENST00000577716 MICU3Q86XE3 530 aa12.66□□□□□ -0.38
RNF43-203ENST00000577716 LINS1Q8NG48 757 aa12.66□□□□□ -0.38
RNF43-203ENST00000577716 DNAJC25Q9H1X3 360 aa12.66□□□□□ -0.38
RNF43-203ENST00000577716 SLC12A7Q9Y666 1083 aa12.66□□□□□ -0.38
RNF43-203ENST00000577716 EIF5P55010 431 aaKnown RBP12.65□□□□□ -0.38
RNF43-203ENST00000577716 MAP3K12Q12852 859 aa12.65□□□□□ -0.38
RNF43-203ENST00000577716 NMIQ13287 307 aaPredicted RBP12.65□□□□□ -0.38
RNF43-203ENST00000577716 SLC39A6Q13433 755 aa12.65□□□□□ -0.38
RNF43-203ENST00000577716 SOGA3Q5TF21 947 aa12.65□□□□□ -0.38
RNF43-203ENST00000577716 PHAXQ9H814 394 aaKnown RBP12.65□□□□□ -0.38
RNF43-203ENST00000577716 MAP3K19Q56UN5 1328 aa12.65□□□□□ -0.38
RNF43-203ENST00000577716 TTC41PQ6P2S7 1318 aa12.65□□□□□ -0.38
RNF43-203ENST00000577716 CCDC181Q5TID7 509 aa12.65□□□□□ -0.38
RNF43-203ENST00000577716 LDHAL6AQ6ZMR3 332 aa12.65□□□□□ -0.38
RNF43-203ENST00000577716 TANGO6Q9C0B7 1094 aa12.65□□□□□ -0.38
RNF43-203ENST00000577716 CTDP1Q9Y5B0 961 aaPredicted RBP12.65□□□□□ -0.38
RNF43-203ENST00000577716 ZNF521Q96K83 1311 aa12.65□□□□□ -0.38
RNF43-203ENST00000577716 CHL1O00533 1208 aa12.65□□□□□ -0.38
RNF43-203ENST00000577716 SNRPA1P09661 255 aaKnown RBP12.65□□□□□ -0.38
RNF43-203ENST00000577716 IARSP41252 1262 aaKnown RBP12.65□□□□□ -0.38
RNF43-203ENST00000577716 KIF4BQ2VIQ3 1234 aa12.65□□□□□ -0.38
RNF43-203ENST00000577716 CCDC102AQ96A19 550 aa12.65□□□□□ -0.38
RNF43-203ENST00000577716 CWC25Q9NXE8 425 aaPredicted RBP12.65□□□□□ -0.38
RNF43-203ENST00000577716 TMOD3Q9NYL9 352 aa12.65□□□□□ -0.38
RNF43-203ENST00000577716 ATP2B2Q01814 1243 aa12.65□□□□□ -0.39
RNF43-203ENST00000577716 TYRO3Q06418 890 aa12.65□□□□□ -0.39
RNF43-203ENST00000577716 SNW1Q13573 536 aaKnown RBP12.65□□□□□ -0.39
RNF43-203ENST00000577716 CWF19L2Q2TBE0 894 aaKnown RBP12.65□□□□□ -0.39
RNF43-203ENST00000577716 ZMYND15Q9H091 742 aa12.65□□□□□ -0.39
RNF43-203ENST00000577716 ZHX3Q9H4I2 956 aa12.65□□□□□ -0.39
RNF43-203ENST00000577716 GPTP24298 496 aa12.64□□□□□ -0.39
RNF43-203ENST00000577716 CPLX3Q8WVH0 158 aa12.64□□□□□ -0.39
RNF43-203ENST00000577716 UBE2Q2Q8WVN8 375 aa12.64□□□□□ -0.39
RNF43-203ENST00000577716 LUC7LQ9NQ29 371 aaKnown RBP12.64□□□□□ -0.39
RNF43-203ENST00000577716 SKILP12757 684 aa12.64□□□□□ -0.39
RNF43-203ENST00000577716 CEP135Q66GS9 1140 aa12.64□□□□□ -0.39
RNF43-203ENST00000577716 Q6ZUG5 572 aa12.64□□□□□ -0.39
RNF43-203ENST00000577716 CCDC144CPQ8IYA2 1237 aa12.64□□□□□ -0.39
RNF43-203ENST00000577716 TRMT112Q9UI30 125 aaKnown RBP12.64□□□□□ -0.39
RNF43-203ENST00000577716 KLF18A0A0U1RQI7 1052 aa12.64□□□□□ -0.39
RNF43-203ENST00000577716 CREB3L3Q68CJ9 461 aa12.64□□□□□ -0.39
RNF43-203ENST00000577716 MYO5CQ9NQX4 1742 aa12.64□□□□□ -0.39
RNF43-203ENST00000577716 SSBP05455 408 aaKnown RBP eCLIP12.63□□□□□ -0.39
RNF43-203ENST00000577716 LMBR1LQ6UX01 489 aa12.63□□□□□ -0.39
RNF43-203ENST00000577716 KRT28Q7Z3Y7 464 aa12.63□□□□□ -0.39
RNF43-203ENST00000577716 NCOA7Q8NI08 942 aa12.63□□□□□ -0.39
RNF43-203ENST00000577716 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.63□□□□□ -0.39
RNF43-203ENST00000577716 MCMDC2Q4G0Z9 681 aa12.63□□□□□ -0.39
RNF43-203ENST00000577716 KIAA1328Q86T90 577 aa12.63□□□□□ -0.39
RNF43-203ENST00000577716 PAXBP1Q9Y5B6 917 aa12.63□□□□□ -0.39
RNF43-203ENST00000577716 KIF5CO60282 957 aa12.63□□□□□ -0.39
RNF43-203ENST00000577716 ZNF445P59923 1031 aa12.62□□□□□ -0.39
RNF43-203ENST00000577716 SSRP1Q08945 709 aaKnown RBP12.62□□□□□ -0.39
RNF43-203ENST00000577716 AKAP4Q5JQC9 854 aa12.62□□□□□ -0.39
RNF43-203ENST00000577716 CCDC102BQ68D86 513 aa12.62□□□□□ -0.39
RNF43-203ENST00000577716 TSPYL1Q9H0U9 437 aa12.62□□□□□ -0.39
RNF43-203ENST00000577716 RANBP6O60518 1105 aaKnown RBP12.62□□□□□ -0.39
RNF43-203ENST00000577716 ZHX1Q9UKY1 873 aaPredicted RBP12.62□□□□□ -0.39
RNF43-203ENST00000577716 ANKRD18BA2A2Z9 1011 aa12.62□□□□□ -0.39
RNF43-203ENST00000577716 METAP2P50579 478 aaKnown RBP eCLIP12.62□□□□□ -0.39
RNF43-203ENST00000577716 FAM193AP78312 1265 aa12.62□□□□□ -0.39
RNF43-203ENST00000577716 TMEM67Q5HYA8 995 aa12.62□□□□□ -0.39
RNF43-203ENST00000577716 MRPS27Q92552 414 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms