RNA–Protein interactions for RNA: ENST00000577498.1

IFT20-204, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-204ENST00000577498 CDHR2Q9BYE9 1310 aa18.76■□□□□ 0.59
IFT20-204ENST00000577498 BCORQ6W2J9 1755 aa18.76■□□□□ 0.59
IFT20-204ENST00000577498 SURF6O75683 361 aaKnown RBP18.76■□□□□ 0.59
IFT20-204ENST00000577498 KCNQ4P56696 695 aa18.76■□□□□ 0.59
IFT20-204ENST00000577498 EPHA10Q5JZY3 1008 aa18.76■□□□□ 0.59
IFT20-204ENST00000577498 PLA2G12BQ9BX93 195 aa18.76■□□□□ 0.59
IFT20-204ENST00000577498 LRRCC1Q9C099 1032 aa18.76■□□□□ 0.59
IFT20-204ENST00000577498 EXOC6BQ9Y2D4 811 aa18.76■□□□□ 0.59
IFT20-204ENST00000577498 C4BP0C0L5 1744 aa18.76■□□□□ 0.59
IFT20-204ENST00000577498 SOCS7O14512 581 aa18.75■□□□□ 0.59
IFT20-204ENST00000577498 PARP10Q53GL7 1025 aa18.75■□□□□ 0.59
IFT20-204ENST00000577498 ERC1Q8IUD2 1116 aa18.75■□□□□ 0.59
IFT20-204ENST00000577498 PLSCR1O15162 318 aa18.74■□□□□ 0.59
IFT20-204ENST00000577498 GNPATO15228 680 aa18.74■□□□□ 0.59
IFT20-204ENST00000577498 FOXO4P98177 505 aa18.74■□□□□ 0.59
IFT20-204ENST00000577498 FAM161AQ3B820 660 aa18.74■□□□□ 0.59
IFT20-204ENST00000577498 KIF1BPQ96EK5 621 aa18.74■□□□□ 0.59
IFT20-204ENST00000577498 RTCBQ9Y3I0 505 aaKnown RBP18.74■□□□□ 0.59
IFT20-204ENST00000577498 ADRA2BP18089 450 aa18.73■□□□□ 0.59
IFT20-204ENST00000577498 GPTP24298 496 aa18.73■□□□□ 0.59
IFT20-204ENST00000577498 JARID2Q92833 1246 aaPredicted RBP18.73■□□□□ 0.59
IFT20-204ENST00000577498 COPRSQ9NQ92 184 aa18.73■□□□□ 0.59
IFT20-204ENST00000577498 LRRC4BQ9NT99 713 aa18.73■□□□□ 0.59
IFT20-204ENST00000577498 NARFQ9UHQ1 456 aa18.73■□□□□ 0.59
IFT20-204ENST00000577498 SCN7AQ01118 1682 aa18.73■□□□□ 0.59
IFT20-204ENST00000577498 AK7Q96M32 723 aa18.72■□□□□ 0.59
IFT20-204ENST00000577498 BACH2Q9BYV9 841 aa18.72■□□□□ 0.59
IFT20-204ENST00000577498 UBN2Q6ZU65 1347 aa18.72■□□□□ 0.59
IFT20-204ENST00000577498 APBB1O00213 710 aa18.71■□□□□ 0.59
IFT20-204ENST00000577498 SMARCA5O60264 1052 aaPredicted RBP18.71■□□□□ 0.59
IFT20-204ENST00000577498 RFX5P48382 616 aaPredicted RBP18.71■□□□□ 0.59
IFT20-204ENST00000577498 LMBR1LQ6UX01 489 aa18.71■□□□□ 0.59
IFT20-204ENST00000577498 PLEKHM2Q8IWE5 1019 aa18.71■□□□□ 0.59
IFT20-204ENST00000577498 RHPN1Q8TCX5 695 aa18.71■□□□□ 0.59
IFT20-204ENST00000577498 TRMT112Q9UI30 125 aaKnown RBP18.71■□□□□ 0.59
IFT20-204ENST00000577498 HSP90B1P14625 803 aaKnown RBP18.7■□□□□ 0.58
IFT20-204ENST00000577498 G3BP1Q13283 466 aaKnown RBP eCLIP18.7■□□□□ 0.58
IFT20-204ENST00000577498 OS9Q13438 667 aaPredicted RBP18.7■□□□□ 0.58
IFT20-204ENST00000577498 UTP14AQ9BVJ6 771 aaKnown RBP18.7■□□□□ 0.58
IFT20-204ENST00000577498 ZPR1O75312 459 aa18.69■□□□□ 0.58
IFT20-204ENST00000577498 TXNRD1Q16881 649 aa18.69■□□□□ 0.58
IFT20-204ENST00000577498 BMP2KLQ5H9B9 411 aa18.69■□□□□ 0.58
IFT20-204ENST00000577498 TRAPPC3LQ5T215 181 aa18.69■□□□□ 0.58
IFT20-204ENST00000577498 FAM89AQ96GI7 184 aa18.69■□□□□ 0.58
IFT20-204ENST00000577498 OSBPL3Q9H4L5 887 aa18.69■□□□□ 0.58
IFT20-204ENST00000577498 NIP7Q9Y221 180 aaKnown RBP eCLIP18.69■□□□□ 0.58
IFT20-204ENST00000577498 SH3TC1Q8TE82 1336 aa18.69■□□□□ 0.58
IFT20-204ENST00000577498 CSF1RP07333 972 aa18.68■□□□□ 0.58
IFT20-204ENST00000577498 C8orf34Q49A92 452 aa18.68■□□□□ 0.58
IFT20-204ENST00000577498 RTL5Q5HYW3 569 aaPredicted RBP18.68■□□□□ 0.58
IFT20-204ENST00000577498 PA2G4Q9UQ80 394 aaKnown RBP18.68■□□□□ 0.58
IFT20-204ENST00000577498 SALL3Q9BXA9 1300 aa18.68■□□□□ 0.58
IFT20-204ENST00000577498 RGPD3A6NKT7 1758 aaPredicted RBP18.68■□□□□ 0.58
IFT20-204ENST00000577498 RGPD4Q7Z3J3 1758 aa18.68■□□□□ 0.58
IFT20-204ENST00000577498 IRS4O14654 1257 aaPredicted RBP18.67■□□□□ 0.58
IFT20-204ENST00000577498 PDE8AO60658 829 aa18.67■□□□□ 0.58
IFT20-204ENST00000577498 APBA3O96018 575 aa18.67■□□□□ 0.58
IFT20-204ENST00000577498 PTPN12Q05209 780 aaKnown RBP18.67■□□□□ 0.58
IFT20-204ENST00000577498 SUSD4Q5VX71 490 aa18.67■□□□□ 0.58
IFT20-204ENST00000577498 ARHGEF1Q92888 912 aaKnown RBP18.67■□□□□ 0.58
IFT20-204ENST00000577498 BCL2L12Q9HB09 334 aa18.67■□□□□ 0.58
IFT20-204ENST00000577498 AOX1Q06278 1338 aa18.67■□□□□ 0.58
IFT20-204ENST00000577498 TNS1Q9HBL0 1735 aaKnown RBP18.66■□□□□ 0.58
IFT20-204ENST00000577498 SSFA2P28290 1259 aa18.66■□□□□ 0.58
IFT20-204ENST00000577498 C16orf71Q8IYS4 520 aaPredicted RBP18.66■□□□□ 0.58
IFT20-204ENST00000577498 PROM2Q8N271 834 aa18.66■□□□□ 0.58
IFT20-204ENST00000577498 STAP2Q9UGK3 403 aa18.66■□□□□ 0.58
IFT20-204ENST00000577498 FBXO3Q9UK99 471 aa18.66■□□□□ 0.58
IFT20-204ENST00000577498 UBR3Q6ZT12 1888 aa18.66■□□□□ 0.58
IFT20-204ENST00000577498 USP42Q9H9J4 1324 aaKnown RBP18.66■□□□□ 0.58
IFT20-204ENST00000577498 NTSR2O95665 410 aa18.65■□□□□ 0.58
IFT20-204ENST00000577498 RFC4P35249 363 aa18.65■□□□□ 0.58
IFT20-204ENST00000577498 PDE1AP54750 535 aa18.65■□□□□ 0.58
IFT20-204ENST00000577498 CTSWP56202 376 aa18.65■□□□□ 0.58
IFT20-204ENST00000577498 TTC22Q5TAA0 569 aa18.65■□□□□ 0.58
IFT20-204ENST00000577498 USPL1Q5W0Q7 1092 aa18.65■□□□□ 0.58
IFT20-204ENST00000577498 CLASRPQ8N2M8 674 aaKnown RBP18.65■□□□□ 0.58
IFT20-204ENST00000577498 OTUD7AQ8TE49 926 aaPredicted RBP18.65■□□□□ 0.58
IFT20-204ENST00000577498 CHMP3Q9Y3E7 222 aa18.65■□□□□ 0.58
IFT20-204ENST00000577498 C4AP0C0L4 1744 aa18.65■□□□□ 0.58
IFT20-204ENST00000577498 CIAO1O76071 339 aa18.64■□□□□ 0.57
IFT20-204ENST00000577498 MX1P20591 662 aa18.64■□□□□ 0.57
IFT20-204ENST00000577498 CCDC57Q2TAC2 916 aa18.64■□□□□ 0.57
IFT20-204ENST00000577498 IL1RAPL2Q9NP60 686 aa18.64■□□□□ 0.57
IFT20-204ENST00000577498 SRP68Q9UHB9 627 aaKnown RBP18.64■□□□□ 0.57
IFT20-204ENST00000577498 LAMB2P55268 1798 aa18.63■□□□□ 0.57
IFT20-204ENST00000577498 MYH3P11055 1940 aa18.63■□□□□ 0.57
IFT20-204ENST00000577498 SASH1O94885 1247 aa18.63■□□□□ 0.57
IFT20-204ENST00000577498 AMIGO3Q86WK7 504 aa18.63■□□□□ 0.57
IFT20-204ENST00000577498 SYNE4Q8N205 404 aa18.63■□□□□ 0.57
IFT20-204ENST00000577498 TTLL11Q8NHH1 800 aa18.63■□□□□ 0.57
IFT20-204ENST00000577498 KLHDC4Q8TBB5 520 aa18.63■□□□□ 0.57
IFT20-204ENST00000577498 NYXQ9GZU5 481 aa18.63■□□□□ 0.57
IFT20-204ENST00000577498 COL24A1Q17RW2 1714 aa18.63■□□□□ 0.57
IFT20-204ENST00000577498 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.62■□□□□ 0.57
IFT20-204ENST00000577498 IFIT5Q13325 482 aaKnown RBP18.62■□□□□ 0.57
IFT20-204ENST00000577498 TBC1D9BQ66K14 1250 aa18.62■□□□□ 0.57
IFT20-204ENST00000577498 SETDB2Q96T68 719 aa18.62■□□□□ 0.57
IFT20-204ENST00000577498 SIL1Q9H173 461 aa18.62■□□□□ 0.57
IFT20-204ENST00000577498 RBM19Q9Y4C8 960 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms