RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 RASA3Q14644 834 aa10.09□□□□□ -0.79
CDH8-203ENST00000577390 CEP112Q8N8E3 955 aa10.09□□□□□ -0.79
CDH8-203ENST00000577390 TUBB4AP04350 444 aa10.09□□□□□ -0.79
CDH8-203ENST00000577390 NUTM1Q86Y26 1132 aa10.09□□□□□ -0.79
CDH8-203ENST00000577390 SMC5Q8IY18 1101 aa10.09□□□□□ -0.79
CDH8-203ENST00000577390 WDR33Q9C0J8 1336 aaKnown RBP10.09□□□□□ -0.79
CDH8-203ENST00000577390 VIMP08670 466 aaKnown RBP10.09□□□□□ -0.79
CDH8-203ENST00000577390 ZCRB1Q8TBF4 217 aaKnown RBP10.09□□□□□ -0.79
CDH8-203ENST00000577390 CFAP43Q8NDM7 1665 aa10.09□□□□□ -0.79
CDH8-203ENST00000577390 CABP4P57796 275 aa10.09□□□□□ -0.79
CDH8-203ENST00000577390 MAP9Q49MG5 647 aa10.09□□□□□ -0.79
CDH8-203ENST00000577390 SMC6Q96SB8 1091 aa10.09□□□□□ -0.79
CDH8-203ENST00000577390 CAVIN2O95810 425 aa10.08□□□□□ -0.8
CDH8-203ENST00000577390 PRIM1P49642 420 aaKnown RBP10.08□□□□□ -0.8
CDH8-203ENST00000577390 IMMTQ16891 758 aaKnown RBP10.08□□□□□ -0.8
CDH8-203ENST00000577390 TBC1D31Q96DN5 1066 aa10.08□□□□□ -0.8
CDH8-203ENST00000577390 MYL6BP14649 208 aa10.08□□□□□ -0.8
CDH8-203ENST00000577390 CCDC184Q52MB2 194 aa10.08□□□□□ -0.8
CDH8-203ENST00000577390 ESCO1Q5FWF5 840 aa10.08□□□□□ -0.8
CDH8-203ENST00000577390 FAM200AQ8TCP9 573 aa10.08□□□□□ -0.8
CDH8-203ENST00000577390 AFG3L2Q9Y4W6 797 aa10.08□□□□□ -0.8
CDH8-203ENST00000577390 CSPG5O95196 566 aa10.08□□□□□ -0.8
CDH8-203ENST00000577390 SRRTQ9BXP5 876 aaKnown RBP10.08□□□□□ -0.8
CDH8-203ENST00000577390 TCERG1LQ5VWI1 586 aa10.08□□□□□ -0.8
CDH8-203ENST00000577390 SIL1Q9H173 461 aa10.08□□□□□ -0.8
CDH8-203ENST00000577390 TACC3Q9Y6A5 838 aa10.08□□□□□ -0.8
CDH8-203ENST00000577390 MROH2BQ7Z745 1585 aa10.08□□□□□ -0.8
CDH8-203ENST00000577390 IGHMBP2P38935 993 aaKnown RBP10.08□□□□□ -0.8
CDH8-203ENST00000577390 SLC9A5Q14940 896 aa10.08□□□□□ -0.8
CDH8-203ENST00000577390 MICALL1Q8N3F8 863 aa10.08□□□□□ -0.8
CDH8-203ENST00000577390 PDZRN3Q9UPQ7 1066 aa10.08□□□□□ -0.8
CDH8-203ENST00000577390 RRP15Q9Y3B9 282 aaKnown RBP10.08□□□□□ -0.8
CDH8-203ENST00000577390 MINK1Q8N4C8 1332 aaPredicted RBP10.08□□□□□ -0.8
CDH8-203ENST00000577390 LRRC9Q6ZRR7 1453 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 SNX21Q969T3 373 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 CLNS1AP54105 237 aaKnown RBP10.07□□□□□ -0.8
CDH8-203ENST00000577390 NUCB1Q02818 461 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 RAD51AP2Q09MP3 1159 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 NAA25Q14CX7 972 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 MMS22LQ6ZRQ5 1243 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 TTC30BQ8N4P2 665 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 PTPN23Q9H3S7 1636 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 POLA1P09884 1462 aaPredicted RBP10.07□□□□□ -0.8
CDH8-203ENST00000577390 CDR2Q01850 454 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 ZSCAN31Q96LW9 406 aaPredicted RBP10.07□□□□□ -0.8
CDH8-203ENST00000577390 PANK3Q9H999 370 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 CLIP2Q9UDT6 1046 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 RAD50Q92878 1312 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 HLTFQ14527 1009 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDH8-203ENST00000577390 NBPF8Q3BBV2 869 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 SKAP1Q86WV1 359 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 RNF216Q9NWF9 866 aaPredicted RBP10.07□□□□□ -0.8
CDH8-203ENST00000577390 FKBP15Q5T1M5 1219 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 ZBTB33Q86T24 672 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 TTC21AQ8NDW8 1320 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 MCM3P25205 808 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 ARHGAP29Q52LW3 1261 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 CCDC65Q8IXS2 484 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 ABTB2Q8N961 1025 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 ERO1AQ96HE7 468 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 ZNF408Q9H9D4 720 aa10.07□□□□□ -0.8
CDH8-203ENST00000577390 GIPC1O14908 333 aa10.06□□□□□ -0.8
CDH8-203ENST00000577390 NBPF20Q3BBV1 942 aa10.06□□□□□ -0.8
CDH8-203ENST00000577390 MCTP2Q6DN12 878 aa10.06□□□□□ -0.8
CDH8-203ENST00000577390 ZNF569Q5MCW4 686 aa10.06□□□□□ -0.8
CDH8-203ENST00000577390 HFM1A2PYH4 1435 aa10.06□□□□□ -0.8
CDH8-203ENST00000577390 CASTP20810 708 aaKnown RBP10.06□□□□□ -0.8
CDH8-203ENST00000577390 STX6O43752 255 aa10.06□□□□□ -0.8
CDH8-203ENST00000577390 CFAP157Q5JU67 520 aa10.06□□□□□ -0.8
CDH8-203ENST00000577390 RNF34Q969K3 372 aa10.06□□□□□ -0.8
CDH8-203ENST00000577390 CCDC77Q9BR77 488 aa10.06□□□□□ -0.8
CDH8-203ENST00000577390 SUFUQ9UMX1 484 aa10.06□□□□□ -0.8
CDH8-203ENST00000577390 HMGB1P1B2RPK0 211 aaPredicted RBP10.06□□□□□ -0.8
CDH8-203ENST00000577390 SFPQP23246 707 aaKnown RBP eCLIP10.06□□□□□ -0.8
CDH8-203ENST00000577390 MCM10Q7L590 875 aa10.06□□□□□ -0.8
CDH8-203ENST00000577390 CDCA7LQ96GN5 454 aa10.06□□□□□ -0.8
CDH8-203ENST00000577390 SPC25Q9HBM1 224 aa10.06□□□□□ -0.8
CDH8-203ENST00000577390 DNAJC21Q5F1R6 531 aaKnown RBP10.06□□□□□ -0.8
CDH8-203ENST00000577390 GBP7Q8N8V2 638 aaPredicted RBP10.06□□□□□ -0.8
CDH8-203ENST00000577390 ELP1O95163 1332 aa10.05□□□□□ -0.8
CDH8-203ENST00000577390 ZMYM4Q5VZL5 1548 aa10.05□□□□□ -0.8
CDH8-203ENST00000577390 EBAG9O00559 213 aa10.05□□□□□ -0.8
CDH8-203ENST00000577390 SEPT14Q6ZU15 432 aa10.05□□□□□ -0.8
CDH8-203ENST00000577390 ARAP1Q96P48 1450 aa10.05□□□□□ -0.8
CDH8-203ENST00000577390 TDRD12Q587J7 1177 aaKnown RBP10.05□□□□□ -0.8
CDH8-203ENST00000577390 ZSCAN25Q6NSZ9 544 aa10.05□□□□□ -0.8
CDH8-203ENST00000577390 TTC12Q9H892 705 aaPredicted RBP10.05□□□□□ -0.8
CDH8-203ENST00000577390 TTC30AQ86WT1 665 aa10.05□□□□□ -0.8
CDH8-203ENST00000577390 PDCD7Q8N8D1 485 aaKnown RBP10.05□□□□□ -0.8
CDH8-203ENST00000577390 MINDY4BA8MYZ0 360 aa10.05□□□□□ -0.8
CDH8-203ENST00000577390 CHMP6Q96FZ7 201 aa10.05□□□□□ -0.8
CDH8-203ENST00000577390 RAB34Q9BZG1 259 aa10.05□□□□□ -0.8
CDH8-203ENST00000577390 TNMDQ9H2S6 317 aa10.05□□□□□ -0.8
CDH8-203ENST00000577390 MAP4K4O95819 1239 aaPredicted RBP10.05□□□□□ -0.8
CDH8-203ENST00000577390 PRR16Q569H4 304 aa10.05□□□□□ -0.8
CDH8-203ENST00000577390 CCDC85AQ96PX6 553 aaPredicted RBP10.05□□□□□ -0.8
CDH8-203ENST00000577390 CLSTN2Q9H4D0 955 aa10.05□□□□□ -0.8
CDH8-203ENST00000577390 KDM2BQ8NHM5 1336 aa10.05□□□□□ -0.8
CDH8-203ENST00000577390 TMEM266Q2M3C6 531 aa10.05□□□□□ -0.8
CDH8-203ENST00000577390 CCDC50Q8IVM0 306 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms