RNA–Protein interactions for RNA: ENST00000573395.1

RAB40B-208, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-208ENST00000573395 RBM17Q96I25 401 aaKnown RBP21.16■□□□□ 0.98
RAB40B-208ENST00000573395 CHPF2Q9P2E5 772 aa21.16■□□□□ 0.98
RAB40B-208ENST00000573395 FER1L6Q2WGJ9 1857 aa21.15■□□□□ 0.98
RAB40B-208ENST00000573395 GNAI1P63096 354 aa21.15■□□□□ 0.98
RAB40B-208ENST00000573395 DUSP27Q5VZP5 1158 aa21.15■□□□□ 0.98
RAB40B-208ENST00000573395 SMC1BQ8NDV3 1235 aa21.15■□□□□ 0.98
RAB40B-208ENST00000573395 NLRP3Q96P20 1036 aa21.15■□□□□ 0.98
RAB40B-208ENST00000573395 MBIPQ9NS73 344 aa21.15■□□□□ 0.98
RAB40B-208ENST00000573395 DBF4Q9UBU7 674 aaPredicted RBP21.15■□□□□ 0.98
RAB40B-208ENST00000573395 CCDC88AQ3V6T2 1871 aa21.15■□□□□ 0.98
RAB40B-208ENST00000573395 TMX4Q9H1E5 349 aaPredicted RBP21.14■□□□□ 0.97
RAB40B-208ENST00000573395 RIC1Q4ADV7 1423 aa21.13■□□□□ 0.97
RAB40B-208ENST00000573395 ZNF316A6NFI3 1004 aaPredicted RBP21.13■□□□□ 0.97
RAB40B-208ENST00000573395 OLFM4Q6UX06 510 aa21.13■□□□□ 0.97
RAB40B-208ENST00000573395 ZNF277Q9NRM2 450 aaPredicted RBP21.13■□□□□ 0.97
RAB40B-208ENST00000573395 IFT57Q9NWB7 429 aa21.13■□□□□ 0.97
RAB40B-208ENST00000573395 RNF123Q5XPI4 1314 aa21.12■□□□□ 0.97
RAB40B-208ENST00000573395 ANP32CO43423 234 aa21.12■□□□□ 0.97
RAB40B-208ENST00000573395 TCIRG1Q13488 830 aa21.12■□□□□ 0.97
RAB40B-208ENST00000573395 CC2D2BQ6DHV5 1058 aa21.12■□□□□ 0.97
RAB40B-208ENST00000573395 HYPKQ9NX55 129 aa21.12■□□□□ 0.97
RAB40B-208ENST00000573395 HOXA10P31260 410 aaPredicted RBP21.11■□□□□ 0.97
RAB40B-208ENST00000573395 NLRP10Q86W26 655 aa21.11■□□□□ 0.97
RAB40B-208ENST00000573395 SYNE4Q8N205 404 aa21.11■□□□□ 0.97
RAB40B-208ENST00000573395 CRAMP1Q96RY5 1269 aa21.11■□□□□ 0.97
RAB40B-208ENST00000573395 TRMT112Q9UI30 125 aaKnown RBP21.11■□□□□ 0.97
RAB40B-208ENST00000573395 TCERG1O14776 1098 aaKnown RBP21.1■□□□□ 0.97
RAB40B-208ENST00000573395 PPEF1O14829 653 aaPredicted RBP21.1■□□□□ 0.97
RAB40B-208ENST00000573395 DDNO94850 711 aaPredicted RBP21.1■□□□□ 0.97
RAB40B-208ENST00000573395 ANKRD13DQ6ZTN6 518 aa21.1■□□□□ 0.97
RAB40B-208ENST00000573395 PLBD2Q8NHP8 589 aa21.1■□□□□ 0.97
RAB40B-208ENST00000573395 ELL2O00472 640 aaPredicted RBP21.09■□□□□ 0.97
RAB40B-208ENST00000573395 ZNF853P0CG23 659 aa21.09■□□□□ 0.97
RAB40B-208ENST00000573395 IARSP41252 1262 aaKnown RBP21.09■□□□□ 0.97
RAB40B-208ENST00000573395 GRIPAP1Q4V328 841 aa21.09■□□□□ 0.97
RAB40B-208ENST00000573395 SLC10A5Q5PT55 438 aa21.09■□□□□ 0.97
RAB40B-208ENST00000573395 SH3TC1Q8TE82 1336 aa21.08■□□□□ 0.97
RAB40B-208ENST00000573395 DICER1Q9UPY3 1922 aaKnown RBP21.08■□□□□ 0.97
RAB40B-208ENST00000573395 CCDC184Q52MB2 194 aa21.08■□□□□ 0.97
RAB40B-208ENST00000573395 JDP2Q8WYK2 163 aa21.08■□□□□ 0.97
RAB40B-208ENST00000573395 PSMD1Q99460 953 aa21.08■□□□□ 0.97
RAB40B-208ENST00000573395 CHMP4AQ9BY43 222 aa21.08■□□□□ 0.97
RAB40B-208ENST00000573395 MRS2Q9HD23 443 aa21.08■□□□□ 0.97
RAB40B-208ENST00000573395 HCLS1P14317 486 aaPredicted RBP21.07■□□□□ 0.96
RAB40B-208ENST00000573395 C3orf67Q6ZVT6 689 aa21.07■□□□□ 0.96
RAB40B-208ENST00000573395 IQCA1LA6NCM1 817 aa21.06■□□□□ 0.96
RAB40B-208ENST00000573395 GOLGA2Q08379 1002 aa21.06■□□□□ 0.96
RAB40B-208ENST00000573395 WDR90Q96KV7 1748 aa21.06■□□□□ 0.96
RAB40B-208ENST00000573395 POTECB2RU33 542 aa21.05■□□□□ 0.96
RAB40B-208ENST00000573395 DDX46Q7L014 1031 aaKnown RBP21.05■□□□□ 0.96
RAB40B-208ENST00000573395 RIC3Q7Z5B4 369 aa21.05■□□□□ 0.96
RAB40B-208ENST00000573395 ZNF428Q96B54 188 aa21.05■□□□□ 0.96
RAB40B-208ENST00000573395 ATP5J2-PTCD1G3V325 749 aa21.04■□□□□ 0.96
RAB40B-208ENST00000573395 ANKRD36CQ5JPF3 1778 aa21.04■□□□□ 0.96
RAB40B-208ENST00000573395 EIF6P56537 245 aaKnown RBP21.03■□□□□ 0.96
RAB40B-208ENST00000573395 LARGE2Q8N3Y3 721 aa21.03■□□□□ 0.96
RAB40B-208ENST00000573395 ATP6V0A2Q9Y487 856 aa21.03■□□□□ 0.96
RAB40B-208ENST00000573395 ABCC4O15439 1325 aa21.03■□□□□ 0.96
RAB40B-208ENST00000573395 ZNF541Q9H0D2 1346 aa21.03■□□□□ 0.96
RAB40B-208ENST00000573395 BBOX1O75936 387 aa21.02■□□□□ 0.96
RAB40B-208ENST00000573395 HTRA3P83110 453 aa21.02■□□□□ 0.96
RAB40B-208ENST00000573395 CCDC30Q5VVM6 783 aa21.02■□□□□ 0.96
RAB40B-208ENST00000573395 C8orf58Q8NAV2 365 aa21.02■□□□□ 0.96
RAB40B-208ENST00000573395 L3MBTL3Q96JM7 780 aaPredicted RBP21.01■□□□□ 0.95
RAB40B-208ENST00000573395 ISCA1Q9BUE6 129 aa21.01■□□□□ 0.95
RAB40B-208ENST00000573395 PHAXQ9H814 394 aaKnown RBP21.01■□□□□ 0.95
RAB40B-208ENST00000573395 FZD9O00144 591 aa21■□□□□ 0.95
RAB40B-208ENST00000573395 DDX58O95786 925 aaKnown RBP21■□□□□ 0.95
RAB40B-208ENST00000573395 CCDC27Q2M243 656 aa21■□□□□ 0.95
RAB40B-208ENST00000573395 CHADLQ6NUI6 762 aa21■□□□□ 0.95
RAB40B-208ENST00000573395 NIM1KQ8IY84 436 aa21■□□□□ 0.95
RAB40B-208ENST00000573395 SUPT20HQ8NEM7 779 aa21■□□□□ 0.95
RAB40B-208ENST00000573395 FAM89AQ96GI7 184 aa21■□□□□ 0.95
RAB40B-208ENST00000573395 HACL1Q9UJ83 578 aa21■□□□□ 0.95
RAB40B-208ENST00000573395 SNED1Q8TER0 1413 aa20.99■□□□□ 0.95
RAB40B-208ENST00000573395 PPIP5K2O43314 1243 aa20.99■□□□□ 0.95
RAB40B-208ENST00000573395 GRAPQ13588 217 aa20.99■□□□□ 0.95
RAB40B-208ENST00000573395 EAPPQ56P03 285 aaPredicted RBP20.99■□□□□ 0.95
RAB40B-208ENST00000573395 RTL5Q5HYW3 569 aaPredicted RBP20.99■□□□□ 0.95
RAB40B-208ENST00000573395 DPP8Q6V1X1 898 aaPredicted RBP20.99■□□□□ 0.95
RAB40B-208ENST00000573395 WWC1Q8IX03 1113 aa20.99■□□□□ 0.95
RAB40B-208ENST00000573395 GPC2Q8N158 579 aa20.99■□□□□ 0.95
RAB40B-208ENST00000573395 DNAJC5GQ8N7S2 189 aa20.99■□□□□ 0.95
RAB40B-208ENST00000573395 GRAPLQ8TC17 118 aaPredicted RBP20.99■□□□□ 0.95
RAB40B-208ENST00000573395 TSR2Q969E8 191 aaKnown RBP20.99■□□□□ 0.95
RAB40B-208ENST00000573395 STK31Q9BXU1 1019 aa20.99■□□□□ 0.95
RAB40B-208ENST00000573395 GJA3Q9Y6H8 435 aa20.99■□□□□ 0.95
RAB40B-208ENST00000573395 HSP90B1P14625 803 aaKnown RBP20.98■□□□□ 0.95
RAB40B-208ENST00000573395 SP8Q8IXZ3 490 aa20.98■□□□□ 0.95
RAB40B-208ENST00000573395 MYD88Q99836 296 aa20.98■□□□□ 0.95
RAB40B-208ENST00000573395 TAF1DQ9H5J8 278 aaPredicted RBP20.98■□□□□ 0.95
RAB40B-208ENST00000573395 CLEC11AQ9Y240 323 aa20.98■□□□□ 0.95
RAB40B-208ENST00000573395 TRIM28Q13263 835 aaKnown RBP20.97■□□□□ 0.95
RAB40B-208ENST00000573395 TMC4Q7Z404 712 aa20.97■□□□□ 0.95
RAB40B-208ENST00000573395 SLC51AQ86UW1 340 aa20.97■□□□□ 0.95
RAB40B-208ENST00000573395 LDHDQ86WU2 507 aa20.97■□□□□ 0.95
RAB40B-208ENST00000573395 MPNDQ8N594 471 aa20.97■□□□□ 0.95
RAB40B-208ENST00000573395 KLRG1Q96E93 195 aa20.97■□□□□ 0.95
RAB40B-208ENST00000573395 IRS4O14654 1257 aaPredicted RBP20.96■□□□□ 0.95
RAB40B-208ENST00000573395 POTEIP0CG38 1075 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms