RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 PTF1AQ7RTS3 328 aa25.3■■□□□ 1.64
CHRNE-202ENST00000572438 AOX1Q06278 1338 aa25.3■■□□□ 1.64
CHRNE-202ENST00000572438 FAM182BQ5T319 152 aa25.3■■□□□ 1.64
CHRNE-202ENST00000572438 RGS17Q9UGC6 210 aaPredicted RBP25.3■■□□□ 1.64
CHRNE-202ENST00000572438 COPRSQ9NQ92 184 aa25.29■■□□□ 1.64
CHRNE-202ENST00000572438 TBC1D2BQ9UPU7 963 aa25.29■■□□□ 1.64
CHRNE-202ENST00000572438 SDSP20132 328 aa25.28■■□□□ 1.64
CHRNE-202ENST00000572438 RFX5P48382 616 aaPredicted RBP25.28■■□□□ 1.64
CHRNE-202ENST00000572438 RTL5Q5HYW3 569 aaPredicted RBP25.28■■□□□ 1.64
CHRNE-202ENST00000572438 LMBR1LQ6UX01 489 aa25.28■■□□□ 1.64
CHRNE-202ENST00000572438 TBC1D9Q6ZT07 1266 aa25.28■■□□□ 1.64
CHRNE-202ENST00000572438 PCCAP05165 728 aaPredicted RBP25.28■■□□□ 1.64
CHRNE-202ENST00000572438 ZNF772Q68DY9 489 aaPredicted RBP25.28■■□□□ 1.64
CHRNE-202ENST00000572438 NUTM1Q86Y26 1132 aa25.28■■□□□ 1.64
CHRNE-202ENST00000572438 MFAP1P55081 439 aaKnown RBP25.27■■□□□ 1.64
CHRNE-202ENST00000572438 CLASRPQ8N2M8 674 aaKnown RBP25.27■■□□□ 1.64
CHRNE-202ENST00000572438 TSHZ3Q63HK5 1081 aa25.26■■□□□ 1.63
CHRNE-202ENST00000572438 NLRP10Q86W26 655 aa25.26■■□□□ 1.63
CHRNE-202ENST00000572438 ZBTB38Q8NAP3 1195 aaPredicted RBP25.26■■□□□ 1.63
CHRNE-202ENST00000572438 KLHDC4Q8TBB5 520 aa25.26■■□□□ 1.63
CHRNE-202ENST00000572438 TBC1D32Q96NH3 1257 aa25.26■■□□□ 1.63
CHRNE-202ENST00000572438 COL5A3P25940 1745 aaPredicted RBP25.26■■□□□ 1.63
CHRNE-202ENST00000572438 PTPN12Q05209 780 aaKnown RBP25.26■■□□□ 1.63
CHRNE-202ENST00000572438 BTAF1O14981 1849 aa25.25■■□□□ 1.63
CHRNE-202ENST00000572438 SASH1O94885 1247 aa25.25■■□□□ 1.63
CHRNE-202ENST00000572438 GPTP24298 496 aa25.25■■□□□ 1.63
CHRNE-202ENST00000572438 LINC00116Q8NCU8 138 aa25.25■■□□□ 1.63
CHRNE-202ENST00000572438 DDRGK1Q96HY6 314 aa25.25■■□□□ 1.63
CHRNE-202ENST00000572438 SIL1Q9H173 461 aa25.25■■□□□ 1.63
CHRNE-202ENST00000572438 MSH5O43196 834 aa25.23■■□□□ 1.63
CHRNE-202ENST00000572438 USP42Q9H9J4 1324 aaKnown RBP25.23■■□□□ 1.63
CHRNE-202ENST00000572438 ZNF34Q8IZ26 560 aa25.23■■□□□ 1.63
CHRNE-202ENST00000572438 PLA2G12BQ9BX93 195 aa25.23■■□□□ 1.63
CHRNE-202ENST00000572438 ANKRD36CQ5JPF3 1778 aa25.23■■□□□ 1.63
CHRNE-202ENST00000572438 CDHR2Q9BYE9 1310 aa25.22■■□□□ 1.63
CHRNE-202ENST00000572438 CNTNAP4Q9C0A0 1308 aa25.22■■□□□ 1.63
CHRNE-202ENST00000572438 MYH14Q7Z406 1995 aaKnown RBP25.22■■□□□ 1.63
CHRNE-202ENST00000572438 FAM89AQ96GI7 184 aa25.22■■□□□ 1.63
CHRNE-202ENST00000572438 CHMP3Q9Y3E7 222 aa25.22■■□□□ 1.63
CHRNE-202ENST00000572438 EIF5BO60841 1220 aaKnown RBP25.21■■□□□ 1.63
CHRNE-202ENST00000572438 CAMTA2O94983 1202 aa25.21■■□□□ 1.63
CHRNE-202ENST00000572438 C22orf23Q9BZE7 217 aa25.21■■□□□ 1.63
CHRNE-202ENST00000572438 TTC41PQ6P2S7 1318 aa25.2■■□□□ 1.63
CHRNE-202ENST00000572438 NUP98P52948 1817 aa25.2■■□□□ 1.62
CHRNE-202ENST00000572438 IFIT2P09913 472 aaKnown RBP25.2■■□□□ 1.62
CHRNE-202ENST00000572438 POTEAQ6S8J7 498 aa25.2■■□□□ 1.62
CHRNE-202ENST00000572438 CASC1Q6TDU7 716 aa25.2■■□□□ 1.62
CHRNE-202ENST00000572438 PI4K2BQ8TCG2 481 aa25.2■■□□□ 1.62
CHRNE-202ENST00000572438 KCNQ4P56696 695 aa25.19■■□□□ 1.62
CHRNE-202ENST00000572438 AACSQ86V21 672 aa25.19■■□□□ 1.62
CHRNE-202ENST00000572438 RC3H1Q5TC82 1133 aaKnown RBP25.19■■□□□ 1.62
CHRNE-202ENST00000572438 CCNL1Q9UK58 526 aaPredicted RBP25.19■■□□□ 1.62
CHRNE-202ENST00000572438 UBN2Q6ZU65 1347 aa25.18■■□□□ 1.62
CHRNE-202ENST00000572438 EAF2Q96CJ1 260 aaPredicted RBP25.18■■□□□ 1.62
CHRNE-202ENST00000572438 GPATCH3Q96I76 525 aa25.18■■□□□ 1.62
CHRNE-202ENST00000572438 BCL11BQ9C0K0 894 aaPredicted RBP25.18■■□□□ 1.62
CHRNE-202ENST00000572438 TRMT112Q9UI30 125 aaKnown RBP25.18■■□□□ 1.62
CHRNE-202ENST00000572438 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.18■■□□□ 1.62
CHRNE-202ENST00000572438 SBF2Q86WG5 1849 aa25.18■■□□□ 1.62
CHRNE-202ENST00000572438 ECHDC1Q9NTX5 307 aa25.17■■□□□ 1.62
CHRNE-202ENST00000572438 TUBGCP6Q96RT7 1819 aa25.17■■□□□ 1.62
CHRNE-202ENST00000572438 TRIM6-TRIM34B2RNG4 842 aa25.16■■□□□ 1.62
CHRNE-202ENST00000572438 CSF1RP07333 972 aa25.16■■□□□ 1.62
CHRNE-202ENST00000572438 ERC2O15083 957 aa25.15■■□□□ 1.62
CHRNE-202ENST00000572438 GLRX3O76003 335 aaKnown RBP25.15■■□□□ 1.62
CHRNE-202ENST00000572438 KRT27Q7Z3Y8 459 aa25.15■■□□□ 1.62
CHRNE-202ENST00000572438 SYNE4Q8N205 404 aa25.15■■□□□ 1.62
CHRNE-202ENST00000572438 TFCP2Q12800 502 aa25.14■■□□□ 1.62
CHRNE-202ENST00000572438 PARP10Q53GL7 1025 aa25.14■■□□□ 1.62
CHRNE-202ENST00000572438 FAM196AQ6ZSG2 479 aa25.14■■□□□ 1.62
CHRNE-202ENST00000572438 RILPL2Q969X0 211 aa25.14■■□□□ 1.62
CHRNE-202ENST00000572438 ZNF652Q9Y2D9 606 aa25.14■■□□□ 1.62
CHRNE-202ENST00000572438 IRS4O14654 1257 aaPredicted RBP25.14■■□□□ 1.61
CHRNE-202ENST00000572438 RBM25P49756 843 aaKnown RBP25.14■■□□□ 1.61
CHRNE-202ENST00000572438 CCDC57Q2TAC2 916 aa25.14■■□□□ 1.61
CHRNE-202ENST00000572438 RBM6P78332 1123 aaKnown RBP25.13■■□□□ 1.61
CHRNE-202ENST00000572438 ATG9AQ7Z3C6 839 aa25.13■■□□□ 1.61
CHRNE-202ENST00000572438 LY75O60449 1722 aa25.13■■□□□ 1.61
CHRNE-202ENST00000572438 RPS6KA4O75676 772 aa25.12■■□□□ 1.61
CHRNE-202ENST00000572438 CIAO1O76071 339 aa25.12■■□□□ 1.61
CHRNE-202ENST00000572438 IL15P40933 162 aaPredicted RBP25.12■■□□□ 1.61
CHRNE-202ENST00000572438 SUSD4Q5VX71 490 aa25.12■■□□□ 1.61
CHRNE-202ENST00000572438 CLEC4GQ6UXB4 293 aa25.12■■□□□ 1.61
CHRNE-202ENST00000572438 CCDC8Q9H0W5 538 aaPredicted RBP25.12■■□□□ 1.61
CHRNE-202ENST00000572438 EYA2O00167 538 aa25.12■■□□□ 1.61
CHRNE-202ENST00000572438 RGL2O15211 777 aa25.12■■□□□ 1.61
CHRNE-202ENST00000572438 RXRBP28702 533 aa25.12■■□□□ 1.61
CHRNE-202ENST00000572438 TNNI3KQ59H18 835 aa25.12■■□□□ 1.61
CHRNE-202ENST00000572438 FPGT-TNNI3KV9GXZ4 949 aa25.12■■□□□ 1.61
CHRNE-202ENST00000572438 CTSWP56202 376 aa25.11■■□□□ 1.61
CHRNE-202ENST00000572438 TTLL11Q8NHH1 800 aa25.11■■□□□ 1.61
CHRNE-202ENST00000572438 ZNF594Q96JF6 807 aaPredicted RBP25.11■■□□□ 1.61
CHRNE-202ENST00000572438 AK7Q96M32 723 aa25.11■■□□□ 1.61
CHRNE-202ENST00000572438 UTP14AQ9BVJ6 771 aaKnown RBP25.11■■□□□ 1.61
CHRNE-202ENST00000572438 TLR7Q9NYK1 1049 aaKnown RBP25.11■■□□□ 1.61
CHRNE-202ENST00000572438 FBXO3Q9UK99 471 aa25.11■■□□□ 1.61
CHRNE-202ENST00000572438 NIP7Q9Y221 180 aaKnown RBP eCLIP25.11■■□□□ 1.61
CHRNE-202ENST00000572438 BCORQ6W2J9 1755 aa25.11■■□□□ 1.61
CHRNE-202ENST00000572438 SH3TC1Q8TE82 1336 aa25.1■■□□□ 1.61
CHRNE-202ENST00000572438 PDE8AO60658 829 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms