RNA–Protein interactions for RNA: ENST00000571245.5

ATP2A3-209, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 868 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-209ENST00000571245 TAOK3Q9H2K8 898 aa17.64■□□□□ 0.41
ATP2A3-209ENST00000571245 CCDC88AQ3V6T2 1871 aa17.64■□□□□ 0.41
ATP2A3-209ENST00000571245 IBTKQ9P2D0 1353 aaPredicted RBP17.64■□□□□ 0.41
ATP2A3-209ENST00000571245 COL11A2P13942 1736 aaPredicted RBP17.64■□□□□ 0.41
ATP2A3-209ENST00000571245 NFKBIEO00221 500 aa17.63■□□□□ 0.41
ATP2A3-209ENST00000571245 TCIRG1Q13488 830 aa17.63■□□□□ 0.41
ATP2A3-209ENST00000571245 ANKRD13DQ6ZTN6 518 aa17.63■□□□□ 0.41
ATP2A3-209ENST00000571245 TSR2Q969E8 191 aaKnown RBP17.63■□□□□ 0.41
ATP2A3-209ENST00000571245 ZC3H4Q9UPT8 1303 aaKnown RBP17.63■□□□□ 0.41
ATP2A3-209ENST00000571245 ARFGEF2Q9Y6D5 1785 aa17.63■□□□□ 0.41
ATP2A3-209ENST00000571245 NTSR2O95665 410 aa17.62■□□□□ 0.41
ATP2A3-209ENST00000571245 CCDC93Q567U6 631 aa17.62■□□□□ 0.41
ATP2A3-209ENST00000571245 C16orf71Q8IYS4 520 aaPredicted RBP17.62■□□□□ 0.41
ATP2A3-209ENST00000571245 PLBD2Q8NHP8 589 aa17.62■□□□□ 0.41
ATP2A3-209ENST00000571245 RBM17Q96I25 401 aaKnown RBP17.62■□□□□ 0.41
ATP2A3-209ENST00000571245 NLRP3Q96P20 1036 aa17.62■□□□□ 0.41
ATP2A3-209ENST00000571245 MYH16Q9H6N6 1097 aa17.62■□□□□ 0.41
ATP2A3-209ENST00000571245 SPINK5Q9NQ38 1064 aaPredicted RBP17.62■□□□□ 0.41
ATP2A3-209ENST00000571245 E9PSI1 815 aa17.61■□□□□ 0.41
ATP2A3-209ENST00000571245 CRY2Q49AN0 593 aa17.61■□□□□ 0.41
ATP2A3-209ENST00000571245 CDCA7LQ96GN5 454 aa17.61■□□□□ 0.41
ATP2A3-209ENST00000571245 TRMT112Q9UI30 125 aaKnown RBP17.61■□□□□ 0.41
ATP2A3-209ENST00000571245 ABCC12Q96J65 1359 aa17.61■□□□□ 0.41
ATP2A3-209ENST00000571245 KIF3CO14782 793 aa17.6■□□□□ 0.41
ATP2A3-209ENST00000571245 CCDC30Q5VVM6 783 aa17.6■□□□□ 0.41
ATP2A3-209ENST00000571245 DPY19L2Q6NUT2 758 aa17.6■□□□□ 0.41
ATP2A3-209ENST00000571245 RIC3Q7Z5B4 369 aa17.6■□□□□ 0.41
ATP2A3-209ENST00000571245 NLRP10Q86W26 655 aa17.6■□□□□ 0.41
ATP2A3-209ENST00000571245 RTKN2Q8IZC4 609 aa17.6■□□□□ 0.41
ATP2A3-209ENST00000571245 C8orf58Q8NAV2 365 aa17.6■□□□□ 0.41
ATP2A3-209ENST00000571245 TMX4Q9H1E5 349 aaPredicted RBP17.6■□□□□ 0.41
ATP2A3-209ENST00000571245 NMRK2Q9NPI5 230 aa17.6■□□□□ 0.41
ATP2A3-209ENST00000571245 RNF123Q5XPI4 1314 aa17.6■□□□□ 0.41
ATP2A3-209ENST00000571245 FANCIQ9NVI1 1328 aa17.6■□□□□ 0.41
ATP2A3-209ENST00000571245 LTBP3Q9NS15 1303 aa17.59■□□□□ 0.41
ATP2A3-209ENST00000571245 SLFN5Q08AF3 891 aa17.59■□□□□ 0.41
ATP2A3-209ENST00000571245 C7orf43Q8WVR3 580 aa17.59■□□□□ 0.41
ATP2A3-209ENST00000571245 SH3TC1Q8TE82 1336 aa17.58■□□□□ 0.4
ATP2A3-209ENST00000571245 TOMM70O94826 608 aa17.58■□□□□ 0.4
ATP2A3-209ENST00000571245 HOXA10P31260 410 aaPredicted RBP17.58■□□□□ 0.4
ATP2A3-209ENST00000571245 PRELPP51888 382 aa17.58■□□□□ 0.4
ATP2A3-209ENST00000571245 SLC10A5Q5PT55 438 aa17.58■□□□□ 0.4
ATP2A3-209ENST00000571245 RRAGCQ9HB90 399 aa17.58■□□□□ 0.4
ATP2A3-209ENST00000571245 RIC1Q4ADV7 1423 aa17.57■□□□□ 0.4
ATP2A3-209ENST00000571245 GLTPD2A6NH11 291 aa17.57■□□□□ 0.4
ATP2A3-209ENST00000571245 DDX58O95786 925 aaKnown RBP17.57■□□□□ 0.4
ATP2A3-209ENST00000571245 CC2D2BQ6DHV5 1058 aa17.57■□□□□ 0.4
ATP2A3-209ENST00000571245 STK31Q9BXU1 1019 aa17.57■□□□□ 0.4
ATP2A3-209ENST00000571245 ANKRD36CQ5JPF3 1778 aa17.56■□□□□ 0.4
ATP2A3-209ENST00000571245 TIAM2Q8IVF5 1701 aa17.56■□□□□ 0.4
ATP2A3-209ENST00000571245 ATP5J2-PTCD1G3V325 749 aa17.56■□□□□ 0.4
ATP2A3-209ENST00000571245 HCLS1P14317 486 aaPredicted RBP17.56■□□□□ 0.4
ATP2A3-209ENST00000571245 FKBP4Q02790 459 aaKnown RBP eCLIP17.56■□□□□ 0.4
ATP2A3-209ENST00000571245 CRAMP1Q96RY5 1269 aa17.56■□□□□ 0.4
ATP2A3-209ENST00000571245 DICER1Q9UPY3 1922 aaKnown RBP17.56■□□□□ 0.4
ATP2A3-209ENST00000571245 FER1L6Q2WGJ9 1857 aa17.56■□□□□ 0.4
ATP2A3-209ENST00000571245 TCERG1O14776 1098 aaKnown RBP17.55■□□□□ 0.4
ATP2A3-209ENST00000571245 GRIPAP1Q4V328 841 aa17.55■□□□□ 0.4
ATP2A3-209ENST00000571245 OLFM4Q6UX06 510 aa17.55■□□□□ 0.4
ATP2A3-209ENST00000571245 TSPYL6Q8N831 410 aa17.55■□□□□ 0.4
ATP2A3-209ENST00000571245 ZNF428Q96B54 188 aa17.55■□□□□ 0.4
ATP2A3-209ENST00000571245 PHAXQ9H814 394 aaKnown RBP17.55■□□□□ 0.4
ATP2A3-209ENST00000571245 SLX4Q8IY92 1834 aa17.55■□□□□ 0.4
ATP2A3-209ENST00000571245 TNRC6CQ9HCJ0 1690 aaKnown RBP17.55■□□□□ 0.4
ATP2A3-209ENST00000571245 PPEF1O14829 653 aaPredicted RBP17.54■□□□□ 0.4
ATP2A3-209ENST00000571245 VEGFAP15692 232 aaPredicted RBP17.54■□□□□ 0.4
ATP2A3-209ENST00000571245 EXOSC9Q06265 439 aaKnown RBP17.54■□□□□ 0.4
ATP2A3-209ENST00000571245 TWISTNBQ3B726 338 aaPredicted RBP17.54■□□□□ 0.4
ATP2A3-209ENST00000571245 C3orf67Q6ZVT6 689 aa17.54■□□□□ 0.4
ATP2A3-209ENST00000571245 ISCA1Q9BUE6 129 aa17.54■□□□□ 0.4
ATP2A3-209ENST00000571245 ZNF277Q9NRM2 450 aaPredicted RBP17.54■□□□□ 0.4
ATP2A3-209ENST00000571245 DDX46Q7L014 1031 aaKnown RBP17.53■□□□□ 0.4
ATP2A3-209ENST00000571245 TRMT2AQ8IZ69 625 aaKnown RBP17.53■□□□□ 0.4
ATP2A3-209ENST00000571245 SYNE4Q8N205 404 aa17.53■□□□□ 0.4
ATP2A3-209ENST00000571245 HSP90B1P14625 803 aaKnown RBP17.52■□□□□ 0.4
ATP2A3-209ENST00000571245 TRIM28Q13263 835 aaKnown RBP17.52■□□□□ 0.4
ATP2A3-209ENST00000571245 RBM46Q8TBY0 533 aaKnown RBP17.52■□□□□ 0.4
ATP2A3-209ENST00000571245 FAM89AQ96GI7 184 aa17.52■□□□□ 0.4
ATP2A3-209ENST00000571245 MYD88Q99836 296 aa17.52■□□□□ 0.4
ATP2A3-209ENST00000571245 BBOX1O75936 387 aa17.51■□□□□ 0.39
ATP2A3-209ENST00000571245 HSPA6P17066 643 aa17.51■□□□□ 0.39
ATP2A3-209ENST00000571245 RTL5Q5HYW3 569 aaPredicted RBP17.51■□□□□ 0.39
ATP2A3-209ENST00000571245 JDP2Q8WYK2 163 aa17.51■□□□□ 0.39
ATP2A3-209ENST00000571245 PSMD1Q99460 953 aa17.51■□□□□ 0.39
ATP2A3-209ENST00000571245 SLC4A2P04920 1241 aa17.5■□□□□ 0.39
ATP2A3-209ENST00000571245 IARSP41252 1262 aaKnown RBP17.5■□□□□ 0.39
ATP2A3-209ENST00000571245 ATP6V0A2Q9Y487 856 aa17.5■□□□□ 0.39
ATP2A3-209ENST00000571245 ABCC4O15439 1325 aa17.49■□□□□ 0.39
ATP2A3-209ENST00000571245 NEXNQ0ZGT2 675 aa17.49■□□□□ 0.39
ATP2A3-209ENST00000571245 KSR2Q6VAB6 950 aa17.49■□□□□ 0.39
ATP2A3-209ENST00000571245 CCDC191Q8NCU4 936 aa17.49■□□□□ 0.39
ATP2A3-209ENST00000571245 CWC25Q9NXE8 425 aaPredicted RBP17.49■□□□□ 0.39
ATP2A3-209ENST00000571245 MAP3K2Q9Y2U5 619 aa17.49■□□□□ 0.39
ATP2A3-209ENST00000571245 IRS4O14654 1257 aaPredicted RBP17.48■□□□□ 0.39
ATP2A3-209ENST00000571245 DDNO94850 711 aaPredicted RBP17.48■□□□□ 0.39
ATP2A3-209ENST00000571245 FSTL1Q12841 308 aa17.48■□□□□ 0.39
ATP2A3-209ENST00000571245 ZBTB38Q8NAP3 1195 aaPredicted RBP17.48■□□□□ 0.39
ATP2A3-209ENST00000571245 METTL22Q9BUU2 404 aaPredicted RBP17.48■□□□□ 0.39
ATP2A3-209ENST00000571245 PI4KAP2A4QPH2 592 aa17.47■□□□□ 0.39
ATP2A3-209ENST00000571245 VAMP4O75379 141 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms