RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 POLR2AP24928 1970 aaKnown RBP9.86□□□□□ -0.83
SMG6-205ENST00000570659 UBN2Q6ZU65 1347 aa9.86□□□□□ -0.83
SMG6-205ENST00000570659 GMPSP49915 693 aaPredicted RBP9.86□□□□□ -0.83
SMG6-205ENST00000570659 BRPF1P55201 1214 aaPredicted RBP9.86□□□□□ -0.83
SMG6-205ENST00000570659 CXCL9Q07325 125 aa9.86□□□□□ -0.83
SMG6-205ENST00000570659 AOC3Q16853 763 aa9.86□□□□□ -0.83
SMG6-205ENST00000570659 CRY2Q49AN0 593 aa9.86□□□□□ -0.83
SMG6-205ENST00000570659 RTKN2Q8IZC4 609 aa9.86□□□□□ -0.83
SMG6-205ENST00000570659 PSMD1Q99460 953 aa9.86□□□□□ -0.83
SMG6-205ENST00000570659 BEGAINQ9BUH8 593 aa9.86□□□□□ -0.83
SMG6-205ENST00000570659 DUOX1Q9NRD9 1551 aa9.86□□□□□ -0.83
SMG6-205ENST00000570659 GPRC5DQ9NZD1 345 aa9.86□□□□□ -0.83
SMG6-205ENST00000570659 NIP7Q9Y221 180 aaKnown RBP eCLIP9.86□□□□□ -0.83
SMG6-205ENST00000570659 NUP98P52948 1817 aa9.86□□□□□ -0.83
SMG6-205ENST00000570659 CEMIPQ8WUJ3 1361 aa9.86□□□□□ -0.83
SMG6-205ENST00000570659 ASTN2O75129 1339 aaPredicted RBP9.85□□□□□ -0.83
SMG6-205ENST00000570659 NPHP1O15259 732 aa9.85□□□□□ -0.83
SMG6-205ENST00000570659 PRPF38BQ5VTL8 546 aaKnown RBP9.85□□□□□ -0.83
SMG6-205ENST00000570659 USP50Q70EL3 339 aaPredicted RBP9.85□□□□□ -0.83
SMG6-205ENST00000570659 TTC5Q8N0Z6 440 aa9.85□□□□□ -0.83
SMG6-205ENST00000570659 PGAP2Q9UHJ9 254 aa9.85□□□□□ -0.83
SMG6-205ENST00000570659 HTTP42858 3142 aa9.85□□□□□ -0.83
SMG6-205ENST00000570659 LAMB2P55268 1798 aa9.85□□□□□ -0.83
SMG6-205ENST00000570659 NPC1L1Q9UHC9 1359 aa9.85□□□□□ -0.83
SMG6-205ENST00000570659 RIC1Q4ADV7 1423 aa9.84□□□□□ -0.83
SMG6-205ENST00000570659 YDJCA8MPS7 323 aa9.84□□□□□ -0.83
SMG6-205ENST00000570659 LARGE2Q8N3Y3 721 aa9.84□□□□□ -0.83
SMG6-205ENST00000570659 ADM5C9JUS6 153 aa9.83□□□□□ -0.84
SMG6-205ENST00000570659 HSPA5P11021 654 aaKnown RBP9.83□□□□□ -0.84
SMG6-205ENST00000570659 EIF6P56537 245 aaKnown RBP9.83□□□□□ -0.84
SMG6-205ENST00000570659 KIF23Q02241 960 aaPredicted RBP9.83□□□□□ -0.84
SMG6-205ENST00000570659 DCTN1Q14203 1278 aa9.83□□□□□ -0.84
SMG6-205ENST00000570659 TTLL7Q6ZT98 887 aa9.83□□□□□ -0.84
SMG6-205ENST00000570659 USP48Q86UV5 1035 aa9.83□□□□□ -0.84
SMG6-205ENST00000570659 FMNL2Q96PY5 1086 aa9.83□□□□□ -0.84
SMG6-205ENST00000570659 RNF186Q9NXI6 227 aa9.83□□□□□ -0.84
SMG6-205ENST00000570659 TRPA1O75762 1119 aa9.82□□□□□ -0.84
SMG6-205ENST00000570659 RAD17O75943 681 aa9.82□□□□□ -0.84
SMG6-205ENST00000570659 GPTP24298 496 aa9.82□□□□□ -0.84
SMG6-205ENST00000570659 LMOD1P29536 600 aaPredicted RBP9.82□□□□□ -0.84
SMG6-205ENST00000570659 HOXA10P31260 410 aaPredicted RBP9.82□□□□□ -0.84
SMG6-205ENST00000570659 JDP2Q8WYK2 163 aa9.82□□□□□ -0.84
SMG6-205ENST00000570659 ZNF428Q96B54 188 aa9.82□□□□□ -0.84
SMG6-205ENST00000570659 KCNQ5Q9NR82 932 aa9.82□□□□□ -0.84
SMG6-205ENST00000570659 ADARB2Q9NS39 739 aaKnown RBP9.82□□□□□ -0.84
SMG6-205ENST00000570659 MIS18AQ9NYP9 233 aa9.82□□□□□ -0.84
SMG6-205ENST00000570659 ZBTB12Q9Y330 459 aaPredicted RBP9.82□□□□□ -0.84
SMG6-205ENST00000570659 LAMB4A4D0S4 1761 aa9.81□□□□□ -0.84
SMG6-205ENST00000570659 PPIP5K2O43314 1243 aa9.81□□□□□ -0.84
SMG6-205ENST00000570659 HUNKP57058 714 aa9.81□□□□□ -0.84
SMG6-205ENST00000570659 TEFQ10587 303 aa9.81□□□□□ -0.84
SMG6-205ENST00000570659 SUSD4Q5VX71 490 aa9.81□□□□□ -0.84
SMG6-205ENST00000570659 CLEC4GQ6UXB4 293 aa9.81□□□□□ -0.84
SMG6-205ENST00000570659 MCM10Q7L590 875 aa9.81□□□□□ -0.84
SMG6-205ENST00000570659 SAMD7Q7Z3H4 446 aa9.81□□□□□ -0.84
SMG6-205ENST00000570659 NGEFQ8N5V2 710 aa9.81□□□□□ -0.84
SMG6-205ENST00000570659 HHIPL1Q96JK4 782 aa9.81□□□□□ -0.84
SMG6-205ENST00000570659 HPS5Q9UPZ3 1129 aa9.81□□□□□ -0.84
SMG6-205ENST00000570659 SCN9AQ15858 1988 aa9.81□□□□□ -0.84
SMG6-205ENST00000570659 BTBD11A6QL63 1104 aa9.8□□□□□ -0.84
SMG6-205ENST00000570659 GNAT3A8MTJ3 354 aa9.8□□□□□ -0.84
SMG6-205ENST00000570659 PPEF1O14829 653 aaPredicted RBP9.8□□□□□ -0.84
SMG6-205ENST00000570659 CA12O43570 354 aa9.8□□□□□ -0.84
SMG6-205ENST00000570659 TPTE2Q6XPS3 522 aa9.8□□□□□ -0.84
SMG6-205ENST00000570659 NIM1KQ8IY84 436 aa9.8□□□□□ -0.84
SMG6-205ENST00000570659 CSRNP1Q96S65 589 aa9.8□□□□□ -0.84
SMG6-205ENST00000570659 R3HDMLQ9H3Y0 253 aa9.8□□□□□ -0.84
SMG6-205ENST00000570659 SCAF8Q9UPN6 1271 aaKnown RBP9.8□□□□□ -0.84
SMG6-205ENST00000570659 AKAP11Q9UKA4 1901 aa9.8□□□□□ -0.84
SMG6-205ENST00000570659 DIAPH1O60610 1272 aaKnown RBP9.79□□□□□ -0.84
SMG6-205ENST00000570659 NTSR2O95665 410 aa9.79□□□□□ -0.84
SMG6-205ENST00000570659 ALDH1B1P30837 517 aa9.79□□□□□ -0.84
SMG6-205ENST00000570659 MOB2Q70IA6 237 aa9.79□□□□□ -0.84
SMG6-205ENST00000570659 TEX13AQ9BXU3 409 aaPredicted RBP9.79□□□□□ -0.84
SMG6-205ENST00000570659 BRCA2P51587 3418 aa9.79□□□□□ -0.84
SMG6-205ENST00000570659 SZT2Q5T011 3432 aa9.79□□□□□ -0.84
SMG6-205ENST00000570659 ABCC4O15439 1325 aa9.79□□□□□ -0.84
SMG6-205ENST00000570659 PER1O15534 1290 aaPredicted RBP9.78□□□□□ -0.84
SMG6-205ENST00000570659 NOGQ13253 232 aa9.78□□□□□ -0.84
SMG6-205ENST00000570659 CNGB1Q14028 1251 aaPredicted RBP9.78□□□□□ -0.84
SMG6-205ENST00000570659 HABP4Q5JVS0 413 aaKnown RBP9.78□□□□□ -0.84
SMG6-205ENST00000570659 RGMBQ6NW40 437 aa9.78□□□□□ -0.84
SMG6-205ENST00000570659 ZNRF3Q9ULT6 936 aa9.78□□□□□ -0.84
SMG6-205ENST00000570659 KDM3BQ7LBC6 1761 aa9.78□□□□□ -0.84
SMG6-205ENST00000570659 RTL9Q8NET4 1388 aa9.77□□□□□ -0.84
SMG6-205ENST00000570659 LRRC37AA6NMS7 1700 aa9.77□□□□□ -0.85
SMG6-205ENST00000570659 CAP1Q01518 475 aa9.77□□□□□ -0.85
SMG6-205ENST00000570659 TBC1D10BQ4KMP7 808 aaPredicted RBP9.77□□□□□ -0.85
SMG6-205ENST00000570659 CC2D1BQ5T0F9 858 aaKnown RBP9.77□□□□□ -0.85
SMG6-205ENST00000570659 MICALL2Q8IY33 904 aa9.77□□□□□ -0.85
SMG6-205ENST00000570659 RTFDC1Q9BY42 306 aaPredicted RBP9.77□□□□□ -0.85
SMG6-205ENST00000570659 RSPH6AQ9H0K4 717 aa9.77□□□□□ -0.85
SMG6-205ENST00000570659 ZBTB3Q9H5J0 574 aa9.77□□□□□ -0.85
SMG6-205ENST00000570659 CNOT7Q9UIV1 285 aaKnown RBP9.77□□□□□ -0.85
SMG6-205ENST00000570659 CENPFP49454 3210 aa9.77□□□□□ -0.85
SMG6-205ENST00000570659 KIF7Q2M1P5 1343 aa9.77□□□□□ -0.85
SMG6-205ENST00000570659 POTEFA5A3E0 1075 aa9.76□□□□□ -0.85
SMG6-205ENST00000570659 U2SURPO15042 1029 aaKnown RBP9.76□□□□□ -0.85
SMG6-205ENST00000570659 TBC1D8O95759 1140 aa9.76□□□□□ -0.85
SMG6-205ENST00000570659 SLC10A3P09131 477 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms