RNA–Protein interactions for RNA: ENST00000569624.5

CDH11-217, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 584 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-217ENST00000569624 PIP4K2AP48426 406 aaPredicted RBP17.29■□□□□ 0.36
CDH11-217ENST00000569624 GRIPAP1Q4V328 841 aa17.29■□□□□ 0.36
CDH11-217ENST00000569624 BTBD11A6QL63 1104 aa17.28■□□□□ 0.36
CDH11-217ENST00000569624 LARGE2Q8N3Y3 721 aa17.28■□□□□ 0.36
CDH11-217ENST00000569624 KCNQ3O43525 872 aa17.27■□□□□ 0.36
CDH11-217ENST00000569624 CELF2O95319 508 aaKnown RBP17.27■□□□□ 0.36
CDH11-217ENST00000569624 EIF4G2P78344 907 aaKnown RBP eCLIP17.27■□□□□ 0.36
CDH11-217ENST00000569624 ADARB2Q9NS39 739 aaKnown RBP17.27■□□□□ 0.36
CDH11-217ENST00000569624 COL3A1P02461 1466 aaPredicted RBP17.26■□□□□ 0.35
CDH11-217ENST00000569624 GPRC5DQ9NZD1 345 aa17.26■□□□□ 0.35
CDH11-217ENST00000569624 RIC1Q4ADV7 1423 aa17.26■□□□□ 0.35
CDH11-217ENST00000569624 ABCC12Q96J65 1359 aa17.26■□□□□ 0.35
CDH11-217ENST00000569624 FAM177BA6PVY3 158 aa17.25■□□□□ 0.35
CDH11-217ENST00000569624 SNRPA1P09661 255 aaKnown RBP17.25■□□□□ 0.35
CDH11-217ENST00000569624 HSPA5P11021 654 aaKnown RBP17.25■□□□□ 0.35
CDH11-217ENST00000569624 GTF2E1P29083 439 aaPredicted RBP17.25■□□□□ 0.35
CDH11-217ENST00000569624 HOXA10P31260 410 aaPredicted RBP17.25■□□□□ 0.35
CDH11-217ENST00000569624 CIAPIN1Q6FI81 312 aa17.25■□□□□ 0.35
CDH11-217ENST00000569624 PRAMEF22A3QJZ6 481 aa17.24■□□□□ 0.35
CDH11-217ENST00000569624 NBPF26B4DH59 902 aa17.24■□□□□ 0.35
CDH11-217ENST00000569624 NBPF10Q6P3W6 841 aaKnown RBP17.24■□□□□ 0.35
CDH11-217ENST00000569624 NIM1KQ8IY84 436 aa17.24■□□□□ 0.35
CDH11-217ENST00000569624 NBPF15Q8N660 670 aa17.24■□□□□ 0.35
CDH11-217ENST00000569624 NYXQ9GZU5 481 aa17.24■□□□□ 0.35
CDH11-217ENST00000569624 KIF7Q2M1P5 1343 aa17.23■□□□□ 0.35
CDH11-217ENST00000569624 NOGQ13253 232 aa17.23■□□□□ 0.35
CDH11-217ENST00000569624 GLIS2Q9BZE0 524 aaPredicted RBP17.23■□□□□ 0.35
CDH11-217ENST00000569624 PGAP2Q9UHJ9 254 aa17.23■□□□□ 0.35
CDH11-217ENST00000569624 NUP98P52948 1817 aa17.23■□□□□ 0.35
CDH11-217ENST00000569624 HLFQ16534 295 aa17.22■□□□□ 0.35
CDH11-217ENST00000569624 PRPF38BQ5VTL8 546 aaKnown RBP17.22■□□□□ 0.35
CDH11-217ENST00000569624 RPGRQ92834 1020 aaKnown RBP17.22■□□□□ 0.35
CDH11-217ENST00000569624 IBTKQ9P2D0 1353 aaPredicted RBP17.22■□□□□ 0.35
CDH11-217ENST00000569624 LAMB4A4D0S4 1761 aa17.22■□□□□ 0.35
CDH11-217ENST00000569624 CDHR2Q9BYE9 1310 aa17.21■□□□□ 0.35
CDH11-217ENST00000569624 NPC1L1Q9UHC9 1359 aa17.21■□□□□ 0.35
CDH11-217ENST00000569624 NUTM1Q86Y26 1132 aa17.21■□□□□ 0.35
CDH11-217ENST00000569624 ZC3H15Q8WU90 426 aaKnown RBP17.21■□□□□ 0.35
CDH11-217ENST00000569624 VPS33BQ9H267 617 aa17.21■□□□□ 0.35
CDH11-217ENST00000569624 PPEF1O14829 653 aaPredicted RBP17.2■□□□□ 0.34
CDH11-217ENST00000569624 U2SURPO15042 1029 aaKnown RBP17.2■□□□□ 0.34
CDH11-217ENST00000569624 PPIP5K2O43314 1243 aa17.2■□□□□ 0.34
CDH11-217ENST00000569624 CRAMP1Q96RY5 1269 aa17.2■□□□□ 0.34
CDH11-217ENST00000569624 SAGE1Q9NXZ1 904 aa17.2■□□□□ 0.34
CDH11-217ENST00000569624 SOX10P56693 466 aa17.19■□□□□ 0.34
CDH11-217ENST00000569624 ZNRF3Q9ULT6 936 aa17.19■□□□□ 0.34
CDH11-217ENST00000569624 GMPSP49915 693 aaPredicted RBP17.18■□□□□ 0.34
CDH11-217ENST00000569624 CXCL9Q07325 125 aa17.18■□□□□ 0.34
CDH11-217ENST00000569624 AOC3Q16853 763 aa17.18■□□□□ 0.34
CDH11-217ENST00000569624 CDC37L1Q7L3B6 337 aa17.18■□□□□ 0.34
CDH11-217ENST00000569624 SLC51AQ86UW1 340 aa17.18■□□□□ 0.34
CDH11-217ENST00000569624 RBM17Q96I25 401 aaKnown RBP17.18■□□□□ 0.34
CDH11-217ENST00000569624 ZIC5Q96T25 663 aa17.18■□□□□ 0.34
CDH11-217ENST00000569624 ZNF408Q9H9D4 720 aa17.18■□□□□ 0.34
CDH11-217ENST00000569624 ERVV-1B6SEH8 477 aa17.17■□□□□ 0.34
CDH11-217ENST00000569624 HUNKP57058 714 aa17.17■□□□□ 0.34
CDH11-217ENST00000569624 PHACTR3Q96KR7 559 aa17.17■□□□□ 0.34
CDH11-217ENST00000569624 AKAP11Q9UKA4 1901 aa17.17■□□□□ 0.34
CDH11-217ENST00000569624 HIRAP54198 1017 aaPredicted RBP17.16■□□□□ 0.34
CDH11-217ENST00000569624 RTFDC1Q9BY42 306 aaPredicted RBP17.15■□□□□ 0.34
CDH11-217ENST00000569624 TMX4Q9H1E5 349 aaPredicted RBP17.15■□□□□ 0.34
CDH11-217ENST00000569624 MAP3K15Q6ZN16 1313 aa17.15■□□□□ 0.34
CDH11-217ENST00000569624 UBN2Q6ZU65 1347 aa17.15■□□□□ 0.34
CDH11-217ENST00000569624 FAM155AB1AL88 458 aaPredicted RBP17.14■□□□□ 0.33
CDH11-217ENST00000569624 TCERG1O14776 1098 aaKnown RBP17.14■□□□□ 0.33
CDH11-217ENST00000569624 PER1O15534 1290 aaPredicted RBP17.14■□□□□ 0.33
CDH11-217ENST00000569624 PRKAR2BP31323 418 aa17.14■□□□□ 0.33
CDH11-217ENST00000569624 SUPT20HQ8NEM7 779 aa17.14■□□□□ 0.33
CDH11-217ENST00000569624 TRPM4Q8TD43 1214 aa17.14■□□□□ 0.33
CDH11-217ENST00000569624 ATP6V0A2Q9Y487 856 aa17.14■□□□□ 0.33
CDH11-217ENST00000569624 TNIP1Q15025 636 aa17.13■□□□□ 0.33
CDH11-217ENST00000569624 CC2D1BQ5T0F9 858 aaKnown RBP17.13■□□□□ 0.33
CDH11-217ENST00000569624 RTF1Q92541 710 aaKnown RBP17.13■□□□□ 0.33
CDH11-217ENST00000569624 BCL2L13Q9BXK5 485 aa17.13■□□□□ 0.33
CDH11-217ENST00000569624 RSPH6AQ9H0K4 717 aa17.13■□□□□ 0.33
CDH11-217ENST00000569624 CLSPNQ9HAW4 1339 aa17.13■□□□□ 0.33
CDH11-217ENST00000569624 NTSR2O95665 410 aa17.12■□□□□ 0.33
CDH11-217ENST00000569624 KIAA2012Q0VF49 1180 aa17.12■□□□□ 0.33
CDH11-217ENST00000569624 RGMBQ6NW40 437 aa17.12■□□□□ 0.33
CDH11-217ENST00000569624 C3orf67Q6ZVT6 689 aa17.12■□□□□ 0.33
CDH11-217ENST00000569624 MCM10Q7L590 875 aa17.12■□□□□ 0.33
CDH11-217ENST00000569624 GPTP24298 496 aa17.11■□□□□ 0.33
CDH11-217ENST00000569624 SUSD4Q5VX71 490 aa17.11■□□□□ 0.33
CDH11-217ENST00000569624 KIF6Q6ZMV9 814 aa17.11■□□□□ 0.33
CDH11-217ENST00000569624 CCDC102AQ96A19 550 aa17.11■□□□□ 0.33
CDH11-217ENST00000569624 POLR2AP24928 1970 aaKnown RBP17.11■□□□□ 0.33
CDH11-217ENST00000569624 RAD17O75943 681 aa17.1■□□□□ 0.33
CDH11-217ENST00000569624 CTU1Q7Z7A3 348 aaKnown RBP17.1■□□□□ 0.33
CDH11-217ENST00000569624 USP48Q86UV5 1035 aa17.1■□□□□ 0.33
CDH11-217ENST00000569624 ZNF34Q8IZ26 560 aa17.1■□□□□ 0.33
CDH11-217ENST00000569624 GBA2Q9HCG7 927 aaPredicted RBP17.1■□□□□ 0.33
CDH11-217ENST00000569624 RNF186Q9NXI6 227 aa17.1■□□□□ 0.33
CDH11-217ENST00000569624 CNOT7Q9UIV1 285 aaKnown RBP17.1■□□□□ 0.33
CDH11-217ENST00000569624 MKI67P46013 3256 aaKnown RBP17.1■□□□□ 0.33
CDH11-217ENST00000569624 KDM3BQ7LBC6 1761 aa17.1■□□□□ 0.33
CDH11-217ENST00000569624 H7C1D1 291 aa17.09■□□□□ 0.33
CDH11-217ENST00000569624 TRPA1O75762 1119 aa17.09■□□□□ 0.33
CDH11-217ENST00000569624 KIF23Q02241 960 aaPredicted RBP17.09■□□□□ 0.33
CDH11-217ENST00000569624 DPP8Q6V1X1 898 aaPredicted RBP17.09■□□□□ 0.33
CDH11-217ENST00000569624 TTLL7Q6ZT98 887 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms