RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 LMO7Q8WWI1 1683 aa8.9□□□□□ -0.98
LINC00556-201ENST00000569603 GPRASP1Q5JY77 1395 aa8.89□□□□□ -0.99
LINC00556-201ENST00000569603 NBPF1Q3BBV0 1214 aa8.89□□□□□ -0.99
LINC00556-201ENST00000569603 NPAS3Q8IXF0 933 aa8.89□□□□□ -0.99
LINC00556-201ENST00000569603 IRF7Q92985 503 aa8.89□□□□□ -0.99
LINC00556-201ENST00000569603 NUDT16Q96DE0 195 aaKnown RBP8.89□□□□□ -0.99
LINC00556-201ENST00000569603 ZFAND3Q9H8U3 227 aa8.89□□□□□ -0.99
LINC00556-201ENST00000569603 NRKQ7Z2Y5 1582 aa8.89□□□□□ -0.99
LINC00556-201ENST00000569603 UTRNP46939 3433 aa8.89□□□□□ -0.99
LINC00556-201ENST00000569603 TNS1Q9HBL0 1735 aaKnown RBP8.88□□□□□ -0.99
LINC00556-201ENST00000569603 SPATA31A5Q5VU36 1347 aa8.88□□□□□ -0.99
LINC00556-201ENST00000569603 SPATA31A7Q8IWB4 1347 aa8.88□□□□□ -0.99
LINC00556-201ENST00000569603 NR3C2P08235 984 aa8.88□□□□□ -0.99
LINC00556-201ENST00000569603 ARID5BQ14865 1188 aa8.88□□□□□ -0.99
LINC00556-201ENST00000569603 QPCTQ16769 361 aa8.88□□□□□ -0.99
LINC00556-201ENST00000569603 PRPF38BQ5VTL8 546 aaKnown RBP8.88□□□□□ -0.99
LINC00556-201ENST00000569603 AK7Q96M32 723 aa8.88□□□□□ -0.99
LINC00556-201ENST00000569603 CDK15Q96Q40 435 aa8.88□□□□□ -0.99
LINC00556-201ENST00000569603 SSH2Q76I76 1423 aa8.88□□□□□ -0.99
LINC00556-201ENST00000569603 USP19O94966 1318 aa8.87□□□□□ -0.99
LINC00556-201ENST00000569603 MYSM1Q5VVJ2 828 aa8.87□□□□□ -0.99
LINC00556-201ENST00000569603 ITPKCQ96DU7 683 aa8.87□□□□□ -0.99
LINC00556-201ENST00000569603 CDK19Q9BWU1 502 aa8.87□□□□□ -0.99
LINC00556-201ENST00000569603 BTG4Q9NY30 223 aa8.87□□□□□ -0.99
LINC00556-201ENST00000569603 DISP2A7MBM2 1401 aa8.87□□□□□ -0.99
LINC00556-201ENST00000569603 KIAA0232Q92628 1395 aa8.86□□□□□ -0.99
LINC00556-201ENST00000569603 QRICH2Q9H0J4 1663 aa8.86□□□□□ -0.99
LINC00556-201ENST00000569603 CAMTA1Q9Y6Y1 1673 aa8.86□□□□□ -0.99
LINC00556-201ENST00000569603 ZIC2O95409 532 aaPredicted RBP8.86□□□□□ -0.99
LINC00556-201ENST00000569603 SCARF1Q14162 830 aa8.86□□□□□ -0.99
LINC00556-201ENST00000569603 NBPF8Q3BBV2 869 aa8.86□□□□□ -0.99
LINC00556-201ENST00000569603 KRT27Q7Z3Y8 459 aa8.86□□□□□ -0.99
LINC00556-201ENST00000569603 DEFB132Q7Z7B7 95 aa8.86□□□□□ -0.99
LINC00556-201ENST00000569603 TSC1Q92574 1164 aa8.86□□□□□ -0.99
LINC00556-201ENST00000569603 TRPM1Q7Z4N2 1603 aa8.86□□□□□ -0.99
LINC00556-201ENST00000569603 CPDO75976 1380 aa8.86□□□□□ -0.99
LINC00556-201ENST00000569603 RGPD1P0DJD0 1748 aa8.85□□□□□ -0.99
LINC00556-201ENST00000569603 ACEP12821 1306 aa8.85□□□□□ -0.99
LINC00556-201ENST00000569603 LRP5O75197 1615 aa8.85□□□□□ -0.99
LINC00556-201ENST00000569603 NGDNQ8NEJ9 315 aaKnown RBP8.85□□□□□ -0.99
LINC00556-201ENST00000569603 SPATA31A1Q5TZJ5 1347 aa8.84□□□□□ -0.99
LINC00556-201ENST00000569603 COL18A1P39060 1754 aa8.84□□□□□ -0.99
LINC00556-201ENST00000569603 GRM5P41594 1212 aa8.84□□□□□ -0.99
LINC00556-201ENST00000569603 PDE4DQ08499 809 aa8.84□□□□□ -0.99
LINC00556-201ENST00000569603 AGERQ15109 404 aa8.84□□□□□ -0.99
LINC00556-201ENST00000569603 ZSCAN1Q8NBB4 408 aa8.84□□□□□ -0.99
LINC00556-201ENST00000569603 PIK3C2AO00443 1686 aa8.84□□□□□ -0.99
LINC00556-201ENST00000569603 SLIT3O75094 1523 aa8.84□□□□□ -0.99
LINC00556-201ENST00000569603 PPIP5K1Q6PFW1 1433 aa8.83□□□□□ -1
LINC00556-201ENST00000569603 LILRB3O75022 631 aa8.83□□□□□ -1
LINC00556-201ENST00000569603 C6orf118Q5T5N4 469 aa8.83□□□□□ -1
LINC00556-201ENST00000569603 L3MBTL2Q969R5 705 aa8.83□□□□□ -1
LINC00556-201ENST00000569603 PRDM11Q9NQV5 511 aa8.83□□□□□ -1
LINC00556-201ENST00000569603 BRD4O60885 1362 aaPredicted RBP8.83□□□□□ -1
LINC00556-201ENST00000569603 PEAK1Q9H792 1746 aa8.83□□□□□ -1
LINC00556-201ENST00000569603 CENPJQ9HC77 1338 aaPredicted RBP8.82□□□□□ -1
LINC00556-201ENST00000569603 USP6P35125 1406 aa8.82□□□□□ -1
LINC00556-201ENST00000569603 GOLGB1Q14789 3259 aaKnown RBP8.82□□□□□ -1
LINC00556-201ENST00000569603 AKAP12Q02952 1782 aa8.82□□□□□ -1
LINC00556-201ENST00000569603 NR5A1Q13285 461 aa8.82□□□□□ -1
LINC00556-201ENST00000569603 BPHLQ86WA6 291 aaPredicted RBP8.82□□□□□ -1
LINC00556-201ENST00000569603 C1QTNF2Q9BXJ5 285 aa8.82□□□□□ -1
LINC00556-201ENST00000569603 PARP4Q9UKK3 1724 aaKnown RBP8.82□□□□□ -1
LINC00556-201ENST00000569603 COL5A2P05997 1499 aaPredicted RBP8.82□□□□□ -1
LINC00556-201ENST00000569603 CHRNA2Q15822 529 aa8.81□□□□□ -1
LINC00556-201ENST00000569603 RTL5Q5HYW3 569 aaPredicted RBP8.81□□□□□ -1
LINC00556-201ENST00000569603 SH3RF1Q7Z6J0 888 aa8.81□□□□□ -1
LINC00556-201ENST00000569603 RREB1Q92766 1687 aa8.81□□□□□ -1
LINC00556-201ENST00000569603 FSHRP23945 695 aa8.8□□□□□ -1
LINC00556-201ENST00000569603 ZC3H6P61129 1189 aaKnown RBP8.8□□□□□ -1
LINC00556-201ENST00000569603 TUSC1Q2TAM9 212 aa8.8□□□□□ -1
LINC00556-201ENST00000569603 FAM182BQ5T319 152 aa8.8□□□□□ -1
LINC00556-201ENST00000569603 NUTM2GQ5VZR2 741 aa8.8□□□□□ -1
LINC00556-201ENST00000569603 MEIOBQ8N635 442 aa8.8□□□□□ -1
LINC00556-201ENST00000569603 CCDC9Q9Y3X0 531 aaKnown RBP8.8□□□□□ -1
LINC00556-201ENST00000569603 USP54Q70EL1 1684 aa8.8□□□□□ -1
LINC00556-201ENST00000569603 WNK3Q9BYP7 1800 aa8.8□□□□□ -1
LINC00556-201ENST00000569603 CPSF1Q10570 1443 aaKnown RBP8.8□□□□□ -1
LINC00556-201ENST00000569603 AATKQ6ZMQ8 1374 aa8.79□□□□□ -1
LINC00556-201ENST00000569603 SBNO2Q9Y2G9 1366 aa8.79□□□□□ -1
LINC00556-201ENST00000569603 GCP02774 474 aa8.79□□□□□ -1
LINC00556-201ENST00000569603 VSIG8P0DPA2 414 aa8.79□□□□□ -1
LINC00556-201ENST00000569603 LARP1Q6PKG0 1096 aaKnown RBP8.79□□□□□ -1
LINC00556-201ENST00000569603 CAMKK2Q96RR4 588 aa8.79□□□□□ -1
LINC00556-201ENST00000569603 SIN3AQ96ST3 1273 aa8.79□□□□□ -1
LINC00556-201ENST00000569603 SBF2Q86WG5 1849 aa8.79□□□□□ -1
LINC00556-201ENST00000569603 MON2Q7Z3U7 1717 aa8.79□□□□□ -1
LINC00556-201ENST00000569603 NFAT5O94916 1531 aa8.79□□□□□ -1
LINC00556-201ENST00000569603 CD163L1Q9NR16 1453 aa8.78□□□□□ -1
LINC00556-201ENST00000569603 NUP188Q5SRE5 1749 aa8.78□□□□□ -1
LINC00556-201ENST00000569603 MAN1A2O60476 641 aa8.78□□□□□ -1
LINC00556-201ENST00000569603 SH3BP5LQ7L8J4 393 aa8.78□□□□□ -1
LINC00556-201ENST00000569603 LINC00528Q8N1L1 170 aa8.78□□□□□ -1
LINC00556-201ENST00000569603 ABTB2Q8N961 1025 aa8.78□□□□□ -1
LINC00556-201ENST00000569603 SLC24A3Q9HC58 644 aa8.78□□□□□ -1
LINC00556-201ENST00000569603 CABP1Q9NZU7 370 aa8.78□□□□□ -1
LINC00556-201ENST00000569603 LRRC37A3O60309 1634 aa8.78□□□□□ -1
LINC00556-201ENST00000569603 RGPD3A6NKT7 1758 aaPredicted RBP8.77□□□□□ -1.01
LINC00556-201ENST00000569603 RGPD4Q7Z3J3 1758 aa8.77□□□□□ -1.01
LINC00556-201ENST00000569603 RGPD5Q99666 1765 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms