RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 VSIG10Q8N0Z9 540 aa12.42□□□□□ -0.42
TCF4-243ENST00000569357 C7orf43Q8WVR3 580 aa12.42□□□□□ -0.42
TCF4-243ENST00000569357 ADAMTSL1Q8N6G6 1762 aa12.42□□□□□ -0.42
TCF4-243ENST00000569357 CELF2O95319 508 aaKnown RBP12.41□□□□□ -0.42
TCF4-243ENST00000569357 NPR1P16066 1061 aa12.41□□□□□ -0.42
TCF4-243ENST00000569357 EPS15P42566 896 aa12.41□□□□□ -0.42
TCF4-243ENST00000569357 ZNF408Q9H9D4 720 aa12.41□□□□□ -0.42
TCF4-243ENST00000569357 CACNA1SQ13698 1873 aa12.4□□□□□ -0.42
TCF4-243ENST00000569357 BRPF1P55201 1214 aaPredicted RBP12.4□□□□□ -0.42
TCF4-243ENST00000569357 THSD7BQ9C0I4 1608 aa12.4□□□□□ -0.42
TCF4-243ENST00000569357 CASP8AP2Q9UKL3 1982 aa12.39□□□□□ -0.43
TCF4-243ENST00000569357 FAM177BA6PVY3 158 aa12.39□□□□□ -0.43
TCF4-243ENST00000569357 SAPCD2Q86UD0 394 aa12.39□□□□□ -0.43
TCF4-243ENST00000569357 LTBP1Q14766 1721 aa12.39□□□□□ -0.43
TCF4-243ENST00000569357 CAMTA2O94983 1202 aa12.38□□□□□ -0.43
TCF4-243ENST00000569357 IL6STP40189 918 aaPredicted RBP12.38□□□□□ -0.43
TCF4-243ENST00000569357 MNX1P50219 401 aaPredicted RBP12.38□□□□□ -0.43
TCF4-243ENST00000569357 SCNN1DP51172 638 aa12.38□□□□□ -0.43
TCF4-243ENST00000569357 USP50Q70EL3 339 aaPredicted RBP12.38□□□□□ -0.43
TCF4-243ENST00000569357 METRNQ9UJH8 293 aa12.38□□□□□ -0.43
TCF4-243ENST00000569357 A1BGP04217 495 aa12.37□□□□□ -0.43
TCF4-243ENST00000569357 DZIP3Q86Y13 1208 aaKnown RBP12.37□□□□□ -0.43
TCF4-243ENST00000569357 MS4A3Q96HJ5 214 aa12.37□□□□□ -0.43
TCF4-243ENST00000569357 ZNF496Q96IT1 587 aaPredicted RBP12.37□□□□□ -0.43
TCF4-243ENST00000569357 GLIS2Q9BZE0 524 aaPredicted RBP12.37□□□□□ -0.43
TCF4-243ENST00000569357 SCN11AQ9UI33 1791 aa12.37□□□□□ -0.43
TCF4-243ENST00000569357 HMOX1P09601 288 aa12.36□□□□□ -0.43
TCF4-243ENST00000569357 GTF2E1P29083 439 aaPredicted RBP12.36□□□□□ -0.43
TCF4-243ENST00000569357 ALDH1B1P30837 517 aa12.36□□□□□ -0.43
TCF4-243ENST00000569357 LARGE2Q8N3Y3 721 aa12.36□□□□□ -0.43
TCF4-243ENST00000569357 ZIC5Q96T25 663 aa12.36□□□□□ -0.43
TCF4-243ENST00000569357 TEX13AQ9BXU3 409 aaPredicted RBP12.36□□□□□ -0.43
TCF4-243ENST00000569357 PIP4K2AP48426 406 aaPredicted RBP12.35□□□□□ -0.43
TCF4-243ENST00000569357 NOGQ13253 232 aa12.35□□□□□ -0.43
TCF4-243ENST00000569357 LCE2DQ5TA82 110 aaPredicted RBP12.35□□□□□ -0.43
TCF4-243ENST00000569357 TPTE2Q6XPS3 522 aa12.35□□□□□ -0.43
TCF4-243ENST00000569357 MORC1Q86VD1 984 aa12.35□□□□□ -0.43
TCF4-243ENST00000569357 PDE4DIPQ5VU43 2346 aa12.34□□□□□ -0.43
TCF4-243ENST00000569357 HEG1Q9ULI3 1381 aa12.34□□□□□ -0.43
TCF4-243ENST00000569357 TCERG1O14776 1098 aaKnown RBP12.34□□□□□ -0.43
TCF4-243ENST00000569357 ATMINO43313 823 aaPredicted RBP12.34□□□□□ -0.43
TCF4-243ENST00000569357 IL13P35225 146 aa12.34□□□□□ -0.43
TCF4-243ENST00000569357 MTHFSDQ2M296 383 aaKnown RBP12.34□□□□□ -0.43
TCF4-243ENST00000569357 ASTLQ6HA08 431 aaPredicted RBP12.34□□□□□ -0.43
TCF4-243ENST00000569357 HHIPL1Q96JK4 782 aa12.34□□□□□ -0.43
TCF4-243ENST00000569357 PSMD1Q99460 953 aa12.34□□□□□ -0.43
TCF4-243ENST00000569357 ZNF652Q9Y2D9 606 aa12.34□□□□□ -0.43
TCF4-243ENST00000569357 SCN7AQ01118 1682 aa12.33□□□□□ -0.44
TCF4-243ENST00000569357 HUNKP57058 714 aa12.33□□□□□ -0.44
TCF4-243ENST00000569357 TEFQ10587 303 aa12.33□□□□□ -0.44
TCF4-243ENST00000569357 ZNF790Q6PG37 636 aa12.33□□□□□ -0.44
TCF4-243ENST00000569357 NIM1KQ8IY84 436 aa12.33□□□□□ -0.44
TCF4-243ENST00000569357 ADARB2Q9NS39 739 aaKnown RBP12.33□□□□□ -0.44
TCF4-243ENST00000569357 NIP7Q9Y221 180 aaKnown RBP eCLIP12.33□□□□□ -0.44
TCF4-243ENST00000569357 MRC1P22897 1456 aa12.33□□□□□ -0.44
TCF4-243ENST00000569357 ARFGEF2Q9Y6D5 1785 aa12.33□□□□□ -0.44
TCF4-243ENST00000569357 KLRG2A4D1S0 409 aaPredicted RBP12.32□□□□□ -0.44
TCF4-243ENST00000569357 TRPA1O75762 1119 aa12.32□□□□□ -0.44
TCF4-243ENST00000569357 NBPF15Q8N660 670 aa12.32□□□□□ -0.44
TCF4-243ENST00000569357 FMNL2Q96PY5 1086 aa12.32□□□□□ -0.44
TCF4-243ENST00000569357 GPRC5DQ9NZD1 345 aa12.32□□□□□ -0.44
TCF4-243ENST00000569357 CC2D2BQ6DHV5 1058 aa12.31□□□□□ -0.44
TCF4-243ENST00000569357 GCC1Q96CN9 775 aa12.31□□□□□ -0.44
TCF4-243ENST00000569357 TRPM7Q96QT4 1865 aa12.3□□□□□ -0.44
TCF4-243ENST00000569357 COL4A5P29400 1685 aa12.3□□□□□ -0.44
TCF4-243ENST00000569357 SPDYE4A6NLX3 237 aa12.3□□□□□ -0.44
TCF4-243ENST00000569357 PPIP5K2O43314 1243 aa12.3□□□□□ -0.44
TCF4-243ENST00000569357 CLEC4GQ6UXB4 293 aa12.3□□□□□ -0.44
TCF4-243ENST00000569357 CDC37L1Q7L3B6 337 aa12.3□□□□□ -0.44
TCF4-243ENST00000569357 RPGRQ92834 1020 aaKnown RBP12.3□□□□□ -0.44
TCF4-243ENST00000569357 BCL2L13Q9BXK5 485 aa12.3□□□□□ -0.44
TCF4-243ENST00000569357 PANK3Q9H999 370 aa12.3□□□□□ -0.44
TCF4-243ENST00000569357 GMPSP49915 693 aaPredicted RBP12.29□□□□□ -0.44
TCF4-243ENST00000569357 KIF23Q02241 960 aaPredicted RBP12.29□□□□□ -0.44
TCF4-243ENST00000569357 CTU1Q7Z7A3 348 aaKnown RBP12.29□□□□□ -0.44
TCF4-243ENST00000569357 SLC39A7Q92504 469 aa12.29□□□□□ -0.44
TCF4-243ENST00000569357 RNF186Q9NXI6 227 aa12.29□□□□□ -0.44
TCF4-243ENST00000569357 KCNQ3O43525 872 aa12.28□□□□□ -0.44
TCF4-243ENST00000569357 CXCL9Q07325 125 aa12.28□□□□□ -0.44
TCF4-243ENST00000569357 AOC3Q16853 763 aa12.28□□□□□ -0.44
TCF4-243ENST00000569357 RGMBQ6NW40 437 aa12.28□□□□□ -0.44
TCF4-243ENST00000569357 DLK2Q6UY11 383 aa12.28□□□□□ -0.44
TCF4-243ENST00000569357 USP48Q86UV5 1035 aa12.28□□□□□ -0.44
TCF4-243ENST00000569357 SAGE1Q9NXZ1 904 aa12.28□□□□□ -0.44
TCF4-243ENST00000569357 USP16Q9Y5T5 823 aa12.28□□□□□ -0.44
TCF4-243ENST00000569357 TNRC18O15417 2968 aaPredicted RBP12.28□□□□□ -0.44
TCF4-243ENST00000569357 C7P10643 843 aa12.27□□□□□ -0.45
TCF4-243ENST00000569357 HABP4Q5JVS0 413 aaKnown RBP12.27□□□□□ -0.45
TCF4-243ENST00000569357 SLC51AQ86UW1 340 aa12.27□□□□□ -0.45
TCF4-243ENST00000569357 NUTM1Q86Y26 1132 aa12.27□□□□□ -0.45
TCF4-243ENST00000569357 TMX4Q9H1E5 349 aaPredicted RBP12.27□□□□□ -0.45
TCF4-243ENST00000569357 HPS5Q9UPZ3 1129 aa12.27□□□□□ -0.45
TCF4-243ENST00000569357 NPC1L1Q9UHC9 1359 aa12.27□□□□□ -0.45
TCF4-243ENST00000569357 UBR2Q8IWV8 1755 aa12.26□□□□□ -0.45
TCF4-243ENST00000569357 PRAMEF22A3QJZ6 481 aa12.26□□□□□ -0.45
TCF4-243ENST00000569357 GNAT3A8MTJ3 354 aa12.26□□□□□ -0.45
TCF4-243ENST00000569357 PPEF1O14829 653 aaPredicted RBP12.26□□□□□ -0.45
TCF4-243ENST00000569357 ZNF157P51786 506 aaPredicted RBP12.26□□□□□ -0.45
TCF4-243ENST00000569357 HIRAP54198 1017 aaPredicted RBP12.26□□□□□ -0.45
TCF4-243ENST00000569357 GRIPAP1Q4V328 841 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms