RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 DLK2Q6UY11 383 aa16.06■□□□□ 0.16
VPS9D1-207ENST00000568691 MORC1Q86VD1 984 aa16.06■□□□□ 0.16
VPS9D1-207ENST00000568691 JDP2Q8WYK2 163 aa16.06■□□□□ 0.16
VPS9D1-207ENST00000568691 TEX13AQ9BXU3 409 aaPredicted RBP16.06■□□□□ 0.16
VPS9D1-207ENST00000568691 PGAP2Q9UHJ9 254 aa16.06■□□□□ 0.16
VPS9D1-207ENST00000568691 HIRAP54198 1017 aaPredicted RBP16.05■□□□□ 0.16
VPS9D1-207ENST00000568691 CRY2Q49AN0 593 aa16.05■□□□□ 0.16
VPS9D1-207ENST00000568691 GPRC5DQ9NZD1 345 aa16.05■□□□□ 0.16
VPS9D1-207ENST00000568691 FAM177BA6PVY3 158 aa16.04■□□□□ 0.16
VPS9D1-207ENST00000568691 FAM155AB1AL88 458 aaPredicted RBP16.04■□□□□ 0.16
VPS9D1-207ENST00000568691 POLR3GLQ9BT43 218 aa16.04■□□□□ 0.16
VPS9D1-207ENST00000568691 NBPF26B4DH59 902 aa16.03■□□□□ 0.16
VPS9D1-207ENST00000568691 HLFQ16534 295 aa16.03■□□□□ 0.16
VPS9D1-207ENST00000568691 NBPF10Q6P3W6 841 aaKnown RBP16.03■□□□□ 0.16
VPS9D1-207ENST00000568691 NBPF15Q8N660 670 aa16.03■□□□□ 0.16
VPS9D1-207ENST00000568691 ADARB2Q9NS39 739 aaKnown RBP16.03■□□□□ 0.16
VPS9D1-207ENST00000568691 ALDH1B1P30837 517 aa16.02■□□□□ 0.16
VPS9D1-207ENST00000568691 TPTE2Q6XPS3 522 aa16.02■□□□□ 0.16
VPS9D1-207ENST00000568691 LARGE2Q8N3Y3 721 aa16.02■□□□□ 0.16
VPS9D1-207ENST00000568691 FMNL2Q96PY5 1086 aa16.02■□□□□ 0.16
VPS9D1-207ENST00000568691 NIP7Q9Y221 180 aaKnown RBP eCLIP16.02■□□□□ 0.16
VPS9D1-207ENST00000568691 SHTN1A0MZ66 631 aa16.01■□□□□ 0.15
VPS9D1-207ENST00000568691 CEMIPQ8WUJ3 1361 aa16■□□□□ 0.15
VPS9D1-207ENST00000568691 CXCL9Q07325 125 aa16■□□□□ 0.15
VPS9D1-207ENST00000568691 NOGQ13253 232 aa16■□□□□ 0.15
VPS9D1-207ENST00000568691 TRPM4Q8TD43 1214 aa16■□□□□ 0.15
VPS9D1-207ENST00000568691 ZNF408Q9H9D4 720 aa16■□□□□ 0.15
VPS9D1-207ENST00000568691 NPC1L1Q9UHC9 1359 aa16■□□□□ 0.15
VPS9D1-207ENST00000568691 KIF7Q2M1P5 1343 aa15.99■□□□□ 0.15
VPS9D1-207ENST00000568691 HOXA10P31260 410 aaPredicted RBP15.99■□□□□ 0.15
VPS9D1-207ENST00000568691 GMPSP49915 693 aaPredicted RBP15.99■□□□□ 0.15
VPS9D1-207ENST00000568691 C3orf67Q6ZVT6 689 aa15.99■□□□□ 0.15
VPS9D1-207ENST00000568691 NUTM1Q86Y26 1132 aa15.99■□□□□ 0.15
VPS9D1-207ENST00000568691 TEFQ10587 303 aa15.98■□□□□ 0.15
VPS9D1-207ENST00000568691 AOC3Q16853 763 aa15.98■□□□□ 0.15
VPS9D1-207ENST00000568691 RIC1Q4ADV7 1423 aa15.98■□□□□ 0.15
VPS9D1-207ENST00000568691 CC2D2BQ6DHV5 1058 aa15.98■□□□□ 0.15
VPS9D1-207ENST00000568691 RNF186Q9NXI6 227 aa15.98■□□□□ 0.15
VPS9D1-207ENST00000568691 RGL2O15211 777 aa15.97■□□□□ 0.15
VPS9D1-207ENST00000568691 HUNKP57058 714 aa15.97■□□□□ 0.15
VPS9D1-207ENST00000568691 AMER1Q5JTC6 1135 aaPredicted RBP15.97■□□□□ 0.15
VPS9D1-207ENST00000568691 SAGE1Q9NXZ1 904 aa15.97■□□□□ 0.15
VPS9D1-207ENST00000568691 MKI67P46013 3256 aaKnown RBP15.97■□□□□ 0.15
VPS9D1-207ENST00000568691 GNAT3A8MTJ3 354 aa15.96■□□□□ 0.15
VPS9D1-207ENST00000568691 KIF23Q02241 960 aaPredicted RBP15.96■□□□□ 0.15
VPS9D1-207ENST00000568691 NIM1KQ8IY84 436 aa15.96■□□□□ 0.15
VPS9D1-207ENST00000568691 ZNF652Q9Y2D9 606 aa15.96■□□□□ 0.15
VPS9D1-207ENST00000568691 TCERG1O14776 1098 aaKnown RBP15.95■□□□□ 0.14
VPS9D1-207ENST00000568691 PPIP5K2O43314 1243 aa15.95■□□□□ 0.14
VPS9D1-207ENST00000568691 TRPA1O75762 1119 aa15.95■□□□□ 0.14
VPS9D1-207ENST00000568691 NPM2Q86SE8 214 aaKnown RBP15.95■□□□□ 0.14
VPS9D1-207ENST00000568691 USP48Q86UV5 1035 aa15.95■□□□□ 0.14
VPS9D1-207ENST00000568691 ZC3H15Q8WU90 426 aaKnown RBP15.95■□□□□ 0.14
VPS9D1-207ENST00000568691 HPS5Q9UPZ3 1129 aa15.95■□□□□ 0.14
VPS9D1-207ENST00000568691 COL3A1P02461 1466 aaPredicted RBP15.95■□□□□ 0.14
VPS9D1-207ENST00000568691 DDX10Q13206 875 aaKnown RBP15.94■□□□□ 0.14
VPS9D1-207ENST00000568691 CDC37L1Q7L3B6 337 aa15.94■□□□□ 0.14
VPS9D1-207ENST00000568691 UBN2Q6ZU65 1347 aa15.94■□□□□ 0.14
VPS9D1-207ENST00000568691 BTBD11A6QL63 1104 aa15.93■□□□□ 0.14
VPS9D1-207ENST00000568691 PPEF1O14829 653 aaPredicted RBP15.93■□□□□ 0.14
VPS9D1-207ENST00000568691 RGMBQ6NW40 437 aa15.93■□□□□ 0.14
VPS9D1-207ENST00000568691 CTU1Q7Z7A3 348 aaKnown RBP15.93■□□□□ 0.14
VPS9D1-207ENST00000568691 CRAMP1Q96RY5 1269 aa15.93■□□□□ 0.14
VPS9D1-207ENST00000568691 CSRNP1Q96S65 589 aa15.93■□□□□ 0.14
VPS9D1-207ENST00000568691 ZNRF3Q9ULT6 936 aa15.93■□□□□ 0.14
VPS9D1-207ENST00000568691 DIAPH1O60610 1272 aaKnown RBP15.92■□□□□ 0.14
VPS9D1-207ENST00000568691 EGFRP00533 1210 aa15.92■□□□□ 0.14
VPS9D1-207ENST00000568691 HABP4Q5JVS0 413 aaKnown RBP15.92■□□□□ 0.14
VPS9D1-207ENST00000568691 PHACTR3Q96KR7 559 aa15.92■□□□□ 0.14
VPS9D1-207ENST00000568691 RTFDC1Q9BY42 306 aaPredicted RBP15.92■□□□□ 0.14
VPS9D1-207ENST00000568691 YDJCA8MPS7 323 aa15.91■□□□□ 0.14
VPS9D1-207ENST00000568691 RAD17O75943 681 aa15.91■□□□□ 0.14
VPS9D1-207ENST00000568691 SNRPA1P09661 255 aaKnown RBP15.91■□□□□ 0.14
VPS9D1-207ENST00000568691 GRIPAP1Q4V328 841 aa15.9■□□□□ 0.14
VPS9D1-207ENST00000568691 SUSD4Q5VX71 490 aa15.9■□□□□ 0.14
VPS9D1-207ENST00000568691 GAS2L2Q8NHY3 880 aa15.9■□□□□ 0.14
VPS9D1-207ENST00000568691 RPGRQ92834 1020 aaKnown RBP15.9■□□□□ 0.14
VPS9D1-207ENST00000568691 CNOT7Q9UIV1 285 aaKnown RBP15.9■□□□□ 0.14
VPS9D1-207ENST00000568691 CDHR2Q9BYE9 1310 aa15.9■□□□□ 0.14
VPS9D1-207ENST00000568691 HTTP42858 3142 aa15.89■□□□□ 0.13
VPS9D1-207ENST00000568691 SLC10A3P09131 477 aa15.89■□□□□ 0.13
VPS9D1-207ENST00000568691 GTF2E1P29083 439 aaPredicted RBP15.89■□□□□ 0.13
VPS9D1-207ENST00000568691 MIER1Q8N108 512 aa15.89■□□□□ 0.13
VPS9D1-207ENST00000568691 GBA2Q9HCG7 927 aaPredicted RBP15.89■□□□□ 0.13
VPS9D1-207ENST00000568691 ATP6V0A2Q9Y487 856 aa15.89■□□□□ 0.13
VPS9D1-207ENST00000568691 ADM5C9JUS6 153 aa15.88■□□□□ 0.13
VPS9D1-207ENST00000568691 NTSR2O95665 410 aa15.88■□□□□ 0.13
VPS9D1-207ENST00000568691 TTLL7Q6ZT98 887 aa15.88■□□□□ 0.13
VPS9D1-207ENST00000568691 SAMD7Q7Z3H4 446 aa15.88■□□□□ 0.13
VPS9D1-207ENST00000568691 VPS33BQ9H267 617 aa15.88■□□□□ 0.13
VPS9D1-207ENST00000568691 ZBTB12Q9Y330 459 aaPredicted RBP15.88■□□□□ 0.13
VPS9D1-207ENST00000568691 KNSTRNQ9Y448 316 aa15.88■□□□□ 0.13
VPS9D1-207ENST00000568691 IBTKQ9P2D0 1353 aaPredicted RBP15.87■□□□□ 0.13
VPS9D1-207ENST00000568691 GPTP24298 496 aa15.87■□□□□ 0.13
VPS9D1-207ENST00000568691 ZNF157P51786 506 aaPredicted RBP15.87■□□□□ 0.13
VPS9D1-207ENST00000568691 KIAA2012Q0VF49 1180 aa15.87■□□□□ 0.13
VPS9D1-207ENST00000568691 MICALL2Q8IY33 904 aa15.87■□□□□ 0.13
VPS9D1-207ENST00000568691 CCDC102AQ96A19 550 aa15.87■□□□□ 0.13
VPS9D1-207ENST00000568691 RBM17Q96I25 401 aaKnown RBP15.87■□□□□ 0.13
VPS9D1-207ENST00000568691 NYXQ9GZU5 481 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms